RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 SLC25A34Q6PIV7 304 aa10.58□□□□□ -0.72
CD9-211ENST00000546073 TRAV13-2A0A0B4J235 113 aa10.57□□□□□ -0.72
CD9-211ENST00000546073 DLEU1O43261 78 aa10.57□□□□□ -0.72
CD9-211ENST00000546073 ZNF73O43830 326 aaPredicted RBP10.56□□□□□ -0.72
CD9-211ENST00000546073 C14orf144Q96I85 54 aa10.56□□□□□ -0.72
CD9-211ENST00000546073 EIF4EBP3O60516 100 aaPredicted RBP10.55□□□□□ -0.72
CD9-211ENST00000546073 SPRR1AP35321 89 aa10.55□□□□□ -0.72
CD9-211ENST00000546073 CRYGAP11844 174 aa10.54□□□□□ -0.72
CD9-211ENST00000546073 KRTAP13-1Q8IUC0 172 aa10.53□□□□□ -0.72
CD9-211ENST00000546073 DMBT1Q9UGM3 2413 aaPredicted RBP10.52□□□□□ -0.73
CD9-211ENST00000546073 B5MCH6 92 aa10.51□□□□□ -0.73
CD9-211ENST00000546073 PRR26Q8N8Z3 221 aa10.51□□□□□ -0.73
CD9-211ENST00000546073 VAMP3Q15836 100 aa10.5□□□□□ -0.73
CD9-211ENST00000546073 PYY3Q5JQD4 70 aa10.5□□□□□ -0.73
CD9-211ENST00000546073 Q6ZRX8 168 aa10.5□□□□□ -0.73
CD9-211ENST00000546073 SMCR5Q8TEV8 140 aa10.5□□□□□ -0.73
CD9-211ENST00000546073 HIGD1BQ9P298 99 aa10.5□□□□□ -0.73
CD9-211ENST00000546073 FAM229BQ4G0N7 80 aa10.49□□□□□ -0.73
CD9-211ENST00000546073 A4D1N5 150 aa10.48□□□□□ -0.73
CD9-211ENST00000546073 COX7BP24311 80 aa10.48□□□□□ -0.73
CD9-211ENST00000546073 KRTAP10-8P60410 259 aa10.48□□□□□ -0.73
CD9-211ENST00000546073 TYMSOSQ8TAI1 123 aa10.48□□□□□ -0.73
CD9-211ENST00000546073 DHRS4-AS1Q9P1J3 65 aa10.48□□□□□ -0.73
CD9-211ENST00000546073 TMEM238LA0A1B0GVL6 79 aa10.47□□□□□ -0.73
CD9-211ENST00000546073 A6NJY4 79 aa10.47□□□□□ -0.73
CD9-211ENST00000546073 KRTAP4-16G5E9R7 235 aaPredicted RBP10.47□□□□□ -0.73
CD9-211ENST00000546073 KRTAP1-4P0C5Y4 121 aa10.46□□□□□ -0.73
CD9-211ENST00000546073 MT1HL1P0DM35 61 aa10.46□□□□□ -0.73
CD9-211ENST00000546073 C6orf99Q4VX62 202 aa10.46□□□□□ -0.73
CD9-211ENST00000546073 TRBV7-6A0A0J9YX20 115 aa10.45□□□□□ -0.74
CD9-211ENST00000546073 TAL2Q16559 108 aa10.45□□□□□ -0.74
CD9-211ENST00000546073 RAB37Q96AX2 223 aa10.45□□□□□ -0.74
CD9-211ENST00000546073 MYCBP2O75592 4640 aa10.45□□□□□ -0.74
CD9-211ENST00000546073 A0A1B0GWB2 263 aa10.44□□□□□ -0.74
CD9-211ENST00000546073 SPRR4Q96PI1 79 aa10.44□□□□□ -0.74
CD9-211ENST00000546073 NHP2Q9NX24 153 aaKnown RBP10.44□□□□□ -0.74
CD9-211ENST00000546073 SLC25A20O43772 301 aa10.43□□□□□ -0.74
CD9-211ENST00000546073 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
CD9-211ENST00000546073 SNCGO76070 127 aa10.42□□□□□ -0.74
CD9-211ENST00000546073 UQCR10Q9UDW1 63 aa10.42□□□□□ -0.74
CD9-211ENST00000546073 ANAPC11Q9NYG5 84 aa10.41□□□□□ -0.74
CD9-211ENST00000546073 ELOF1P60002 83 aaKnown RBP10.4□□□□□ -0.74
CD9-211ENST00000546073 C12orf57Q99622 126 aa10.4□□□□□ -0.74
CD9-211ENST00000546073 C4orf48Q5BLP8 95 aa10.39□□□□□ -0.75
CD9-211ENST00000546073 CEND1Q8N111 149 aa10.39□□□□□ -0.75
CD9-211ENST00000546073 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
CD9-211ENST00000546073 Q9BRP9 147 aa10.39□□□□□ -0.75
CD9-211ENST00000546073 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
CD9-211ENST00000546073 Q1RN00 199 aa10.37□□□□□ -0.75
CD9-211ENST00000546073 BVES-AS1Q5T3Y7 98 aa10.37□□□□□ -0.75
CD9-211ENST00000546073 A0A087X002 238 aa10.36□□□□□ -0.75
CD9-211ENST00000546073 HSD52Q0P140 79 aa10.36□□□□□ -0.75
CD9-211ENST00000546073 C2orf91Q6ZV80 131 aa10.36□□□□□ -0.75
CD9-211ENST00000546073 H7C2G1 150 aa10.35□□□□□ -0.75
CD9-211ENST00000546073 ERC2-IT1O76042 136 aa10.35□□□□□ -0.75
CD9-211ENST00000546073 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
CD9-211ENST00000546073 SMIM6P0DI80 62 aa10.34□□□□□ -0.75
CD9-211ENST00000546073 LINC00483Q53H64 154 aa10.33□□□□□ -0.76
CD9-211ENST00000546073 LINC00304Q8N9R0 145 aa10.33□□□□□ -0.76
CD9-211ENST00000546073 LAMTOR3Q9UHA4 124 aa10.33□□□□□ -0.76
CD9-211ENST00000546073 LRP1Q07954 4544 aaKnown RBP10.32□□□□□ -0.76
CD9-211ENST00000546073 IGLV9-49A0A0B4J1Y8 123 aa10.32□□□□□ -0.76
CD9-211ENST00000546073 CFC1BP0CG36 223 aa10.32□□□□□ -0.76
CD9-211ENST00000546073 CFC1P0CG37 223 aa10.32□□□□□ -0.76
CD9-211ENST00000546073 SPAG11AQ6PDA7 123 aa10.32□□□□□ -0.76
CD9-211ENST00000546073 DEFB105AQ8NG35 78 aa10.32□□□□□ -0.76
CD9-211ENST00000546073 PRO1854Q9UHT4 67 aa10.32□□□□□ -0.76
CD9-211ENST00000546073 C9orf153Q5TBE3 101 aa10.31□□□□□ -0.76
CD9-211ENST00000546073 SSBP3-AS1Q7Z2R9 100 aa10.3□□□□□ -0.76
CD9-211ENST00000546073 TEX49A0A1B0GTD5 131 aa10.29□□□□□ -0.76
CD9-211ENST00000546073 hADV29S1A0JD25 119 aa10.29□□□□□ -0.76
CD9-211ENST00000546073 TSPAN13O95857 204 aa10.29□□□□□ -0.76
CD9-211ENST00000546073 CTAG1AP78358 180 aa10.29□□□□□ -0.76
CD9-211ENST00000546073 KRTAP13-2Q52LG2 175 aa10.29□□□□□ -0.76
CD9-211ENST00000546073 ST20-AS1Q8NBB2 130 aa10.29□□□□□ -0.76
CD9-211ENST00000546073 FAT3Q8TDW7 4589 aa10.29□□□□□ -0.76
CD9-211ENST00000546073 H0YGX0 51 aa10.28□□□□□ -0.76
CD9-211ENST00000546073 C3orf22Q8N5N4 141 aa10.28□□□□□ -0.76
CD9-211ENST00000546073 MOBPQ13875 183 aa10.27□□□□□ -0.77
CD9-211ENST00000546073 TSTD3H0UI37 97 aa10.26□□□□□ -0.77
CD9-211ENST00000546073 GHRHP01286 108 aa10.26□□□□□ -0.77
CD9-211ENST00000546073 LINC00575Q6W349 94 aa10.26□□□□□ -0.77
CD9-211ENST00000546073 COX6CP09669 75 aa10.25□□□□□ -0.77
CD9-211ENST00000546073 PSMB2P49721 201 aa10.25□□□□□ -0.77
CD9-211ENST00000546073 FXYD2P54710 66 aa10.25□□□□□ -0.77
CD9-211ENST00000546073 PRO1933Q9H354 126 aa10.25□□□□□ -0.77
CD9-211ENST00000546073 F8WEM9 126 aa10.24□□□□□ -0.77
CD9-211ENST00000546073 Q8NBF4 154 aa10.24□□□□□ -0.77
CD9-211ENST00000546073 M0R143 59 aa10.23□□□□□ -0.77
CD9-211ENST00000546073 SPRR1BP22528 89 aa10.23□□□□□ -0.77
CD9-211ENST00000546073 SPINK1P00995 79 aa10.21□□□□□ -0.77
CD9-211ENST00000546073 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.21□□□□□ -0.77
CD9-211ENST00000546073 PRR4Q16378 134 aa10.2□□□□□ -0.78
CD9-211ENST00000546073 OCIAD2Q56VL3 154 aa10.2□□□□□ -0.78
CD9-211ENST00000546073 Q6ZQY7 126 aa10.19□□□□□ -0.78
CD9-211ENST00000546073 IGLV5-48A0A075B6I7 105 aa10.18□□□□□ -0.78
CD9-211ENST00000546073 SNHG12Q9BXW3 62 aa10.18□□□□□ -0.78
CD9-211ENST00000546073 HERC1Q15751 4861 aa10.17□□□□□ -0.78
CD9-211ENST00000546073 LOC105371267A0A1B0GV96 52 aa10.17□□□□□ -0.78
CD9-211ENST00000546073 PPDPFLQ8WWR9 84 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms