RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 IGKV2-28A0A075B6P5 120 aa10.04□□□□□ -0.8
LIMS2-217ENST00000545738 IGKV2D-28P01615 120 aa10.04□□□□□ -0.8
LIMS2-217ENST00000545738 MUSTN1Q8IVN3 82 aa10.04□□□□□ -0.8
LIMS2-217ENST00000545738 SPANXB1Q9NS25 103 aaPredicted RBP10.04□□□□□ -0.8
LIMS2-217ENST00000545738 FAM229AH3BQW9 127 aa10.03□□□□□ -0.8
LIMS2-217ENST00000545738 UBE2BP63146 152 aa10.03□□□□□ -0.8
LIMS2-217ENST00000545738 LRP1Q07954 4544 aaKnown RBP10.02□□□□□ -0.8
LIMS2-217ENST00000545738 IGLV1-50A0A075B6I6 118 aa10.02□□□□□ -0.81
LIMS2-217ENST00000545738 NDUFC2O95298 119 aa10.02□□□□□ -0.81
LIMS2-217ENST00000545738 M0R378 163 aa10.01□□□□□ -0.81
LIMS2-217ENST00000545738 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
LIMS2-217ENST00000545738 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
LIMS2-217ENST00000545738 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
LIMS2-217ENST00000545738 FLG2Q5D862 2391 aaPredicted RBP9.99□□□□□ -0.81
LIMS2-217ENST00000545738 IFITM1P13164 125 aa9.99□□□□□ -0.81
LIMS2-217ENST00000545738 C1orf137Q5JT78 98 aa9.99□□□□□ -0.81
LIMS2-217ENST00000545738 LINC00337Q8N6G1 96 aa9.99□□□□□ -0.81
LIMS2-217ENST00000545738 ANAPC13Q9BS18 74 aa9.99□□□□□ -0.81
LIMS2-217ENST00000545738 HIGD1BQ9P298 99 aa9.99□□□□□ -0.81
LIMS2-217ENST00000545738 PLA2G1BP04054 148 aaKnown RBP9.98□□□□□ -0.81
LIMS2-217ENST00000545738 FAT3Q8TDW7 4589 aa9.97□□□□□ -0.81
LIMS2-217ENST00000545738 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
LIMS2-217ENST00000545738 PPDPFQ9H3Y8 114 aa9.97□□□□□ -0.81
LIMS2-217ENST00000545738 IGLV6-57P01721 117 aa9.96□□□□□ -0.81
LIMS2-217ENST00000545738 HIST1H4GQ99525 98 aa9.96□□□□□ -0.81
LIMS2-217ENST00000545738 TMEM126AQ9H061 195 aa9.96□□□□□ -0.82
LIMS2-217ENST00000545738 A4D1N5 150 aa9.95□□□□□ -0.82
LIMS2-217ENST00000545738 IGLV7-43P04211 117 aa9.93□□□□□ -0.82
LIMS2-217ENST00000545738 C5orf47Q569G3 176 aa9.93□□□□□ -0.82
LIMS2-217ENST00000545738 KCNQ1DNQ9H478 68 aa9.93□□□□□ -0.82
LIMS2-217ENST00000545738 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
LIMS2-217ENST00000545738 SPRR1AP35321 89 aa9.92□□□□□ -0.82
LIMS2-217ENST00000545738 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
LIMS2-217ENST00000545738 KRTAP13-1Q8IUC0 172 aa9.92□□□□□ -0.82
LIMS2-217ENST00000545738 BCE1O60756 84 aa9.91□□□□□ -0.82
LIMS2-217ENST00000545738 S100A7L2Q5SY68 101 aa9.9□□□□□ -0.82
LIMS2-217ENST00000545738 COPS9Q8WXC6 57 aa9.9□□□□□ -0.82
LIMS2-217ENST00000545738 FXYD2P54710 66 aa9.9□□□□□ -0.83
LIMS2-217ENST00000545738 PRLHP81277 87 aa9.9□□□□□ -0.83
LIMS2-217ENST00000545738 SMIM20Q8N5G0 67 aa9.9□□□□□ -0.83
LIMS2-217ENST00000545738 PRYO14603 147 aa9.89□□□□□ -0.83
LIMS2-217ENST00000545738 CEND1Q8N111 149 aa9.89□□□□□ -0.83
LIMS2-217ENST00000545738 OR13C6PQ8NH95 151 aa9.89□□□□□ -0.83
LIMS2-217ENST00000545738 H3BMG7 143 aa9.88□□□□□ -0.83
LIMS2-217ENST00000545738 TRAV23DV6A0A075B6W5 121 aa9.87□□□□□ -0.83
LIMS2-217ENST00000545738 B5MCH6 92 aa9.87□□□□□ -0.83
LIMS2-217ENST00000545738 TAL2Q16559 108 aa9.87□□□□□ -0.83
LIMS2-217ENST00000545738 CFC1BP0CG36 223 aa9.87□□□□□ -0.83
LIMS2-217ENST00000545738 CFC1P0CG37 223 aa9.87□□□□□ -0.83
LIMS2-217ENST00000545738 INAFM2P0DMQ5 153 aa9.87□□□□□ -0.83
LIMS2-217ENST00000545738 Q6Q795 121 aa9.87□□□□□ -0.83
LIMS2-217ENST00000545738 FAM19A1Q7Z5A9 133 aa9.87□□□□□ -0.83
LIMS2-217ENST00000545738 TNXBP22105 4242 aa9.86□□□□□ -0.83
LIMS2-217ENST00000545738 ZNF861PO60384 105 aa9.86□□□□□ -0.83
LIMS2-217ENST00000545738 RAB37Q96AX2 223 aa9.86□□□□□ -0.83
LIMS2-217ENST00000545738 CDIP1Q9H305 208 aa9.86□□□□□ -0.83
LIMS2-217ENST00000545738 ZNF73O43830 326 aaPredicted RBP9.85□□□□□ -0.83
LIMS2-217ENST00000545738 ETDBQ3ZM63 59 aa9.85□□□□□ -0.83
LIMS2-217ENST00000545738 LYRM7Q5U5X0 104 aa9.84□□□□□ -0.83
LIMS2-217ENST00000545738 SPINK6Q6UWN8 80 aa9.84□□□□□ -0.83
LIMS2-217ENST00000545738 UBE2AP49459 152 aa9.83□□□□□ -0.84
LIMS2-217ENST00000545738 PRO0461Q9UI25 63 aa9.83□□□□□ -0.84
LIMS2-217ENST00000545738 TRAV13-2A0A0B4J235 113 aa9.82□□□□□ -0.84
LIMS2-217ENST00000545738 PPDPFLQ8WWR9 84 aa9.82□□□□□ -0.84
LIMS2-217ENST00000545738 H0Y9J4 135 aa9.82□□□□□ -0.84
LIMS2-217ENST00000545738 C6orf99Q4VX62 202 aa9.82□□□□□ -0.84
LIMS2-217ENST00000545738 SMIM11BQ8TCY0 68 aa9.82□□□□□ -0.84
LIMS2-217ENST00000545738 Q9BRP9 147 aa9.82□□□□□ -0.84
LIMS2-217ENST00000545738 A0A1B0GWB2 263 aa9.81□□□□□ -0.84
LIMS2-217ENST00000545738 MT-ATP8P03928 68 aa9.81□□□□□ -0.84
LIMS2-217ENST00000545738 RPL13AP40429 203 aaKnown RBP9.81□□□□□ -0.84
LIMS2-217ENST00000545738 SMCR5Q8TEV8 140 aa9.81□□□□□ -0.84
LIMS2-217ENST00000545738 ETDCA0A1B0GVM5 59 aa9.8□□□□□ -0.84
LIMS2-217ENST00000545738 RPL28P46779 137 aaKnown RBP9.8□□□□□ -0.84
LIMS2-217ENST00000545738 Q6ZRX8 168 aa9.8□□□□□ -0.84
LIMS2-217ENST00000545738 NAA38Q9BRA0 125 aaKnown RBP9.8□□□□□ -0.84
LIMS2-217ENST00000545738 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
LIMS2-217ENST00000545738 K7ERJ3 54 aa9.79□□□□□ -0.84
LIMS2-217ENST00000545738 KRTAP1-4P0C5Y4 121 aa9.79□□□□□ -0.84
LIMS2-217ENST00000545738 ERC2-IT1O76042 136 aa9.79□□□□□ -0.84
LIMS2-217ENST00000545738 NDUFV3P56181 108 aaKnown RBP9.79□□□□□ -0.84
LIMS2-217ENST00000545738 HIGD2AQ9BW72 106 aa9.79□□□□□ -0.84
LIMS2-217ENST00000545738 DIRC1Q969H9 104 aa9.78□□□□□ -0.84
LIMS2-217ENST00000545738 NHP2Q9NX24 153 aaKnown RBP9.78□□□□□ -0.84
LIMS2-217ENST00000545738 H7C2G1 150 aa9.76□□□□□ -0.85
LIMS2-217ENST00000545738 ELOF1P60002 83 aaKnown RBP9.76□□□□□ -0.85
LIMS2-217ENST00000545738 TEN1Q86WV5 123 aa9.75□□□□□ -0.85
LIMS2-217ENST00000545738 ANAPC11Q9NYG5 84 aa9.75□□□□□ -0.85
LIMS2-217ENST00000545738 SNCGO76070 127 aa9.73□□□□□ -0.85
LIMS2-217ENST00000545738 PRO1854Q9UHT4 67 aa9.73□□□□□ -0.85
LIMS2-217ENST00000545738 COX7BP24311 80 aa9.72□□□□□ -0.85
LIMS2-217ENST00000545738 MT1HL1P0DM35 61 aa9.71□□□□□ -0.85
LIMS2-217ENST00000545738 HERC1Q15751 4861 aa9.71□□□□□ -0.86
LIMS2-217ENST00000545738 TRBV7-6A0A0J9YX20 115 aa9.7□□□□□ -0.86
LIMS2-217ENST00000545738 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
LIMS2-217ENST00000545738 A0A087X002 238 aa9.7□□□□□ -0.86
LIMS2-217ENST00000545738 A0A1B0GX51 115 aa9.7□□□□□ -0.86
LIMS2-217ENST00000545738 ST20-AS1Q8NBB2 130 aa9.7□□□□□ -0.86
LIMS2-217ENST00000545738 LINC01600Q96MT4 127 aa9.7□□□□□ -0.86
LIMS2-217ENST00000545738 SPRR4Q96PI1 79 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms