RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 SPRR4Q96PI1 79 aa3.33□□□□□ -1.88
UBE4A-203ENST00000545354 AHCTF1Q8WYP5 2266 aa3.33□□□□□ -1.88
UBE4A-203ENST00000545354 FBN3Q75N90 2809 aa3.33□□□□□ -1.88
UBE4A-203ENST00000545354 USF3Q68DE3 2245 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 PRAC2D3DTV9 90 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 LEAP2Q969E1 77 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 KNL1Q8NG31 2342 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 NUPR2A6NF83 97 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 SMIM1B2RUZ4 78 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 RNASE3P12724 160 aaKnown RBP3.32□□□□□ -1.88
UBE4A-203ENST00000545354 SVILO95425 2214 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 ALPK2Q86TB3 2170 aa3.32□□□□□ -1.88
UBE4A-203ENST00000545354 KNTC1P50748 2209 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 CELSR2Q9HCU4 2923 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 IGKV3D-11A0A0A0MRZ8 115 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 CRYBG3Q68DQ2 2970 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 C9orf163Q8N9P6 203 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 TLN1Q9Y490 2541 aaKnown RBP3.31□□□□□ -1.88
UBE4A-203ENST00000545354 DOCK10Q96BY6 2186 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 OTOGQ6ZRI0 2925 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 CELSR1Q9NYQ6 3014 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 SLURP1P55000 103 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 COX17Q14061 63 aa3.31□□□□□ -1.88
UBE4A-203ENST00000545354 SPENQ96T58 3664 aaKnown RBP3.31□□□□□ -1.88
UBE4A-203ENST00000545354 SPTBN1Q01082 2364 aaKnown RBP3.3□□□□□ -1.88
UBE4A-203ENST00000545354 ADGRG4Q8IZF6 3080 aa3.3□□□□□ -1.88
UBE4A-203ENST00000545354 NBASA2RRP1 2371 aa3.3□□□□□ -1.88
UBE4A-203ENST00000545354 DEFB131BA0A096LNP1 70 aa3.3□□□□□ -1.88
UBE4A-203ENST00000545354 ODF3BA8MYP8 253 aa3.3□□□□□ -1.88
UBE4A-203ENST00000545354 CCL3L1P16619 93 aa3.3□□□□□ -1.88
UBE4A-203ENST00000545354 MRPS21P82921 87 aaKnown RBP3.3□□□□□ -1.88
UBE4A-203ENST00000545354 Q6ZQY7 126 aa3.3□□□□□ -1.88
UBE4A-203ENST00000545354 DEFB119Q8N690 84 aa3.3□□□□□ -1.88
UBE4A-203ENST00000545354 K7EIM0 57 aa3.29□□□□□ -1.88
UBE4A-203ENST00000545354 IGKV3-20P01619 116 aa3.29□□□□□ -1.88
UBE4A-203ENST00000545354 DEFB113Q30KQ7 82 aa3.29□□□□□ -1.88
UBE4A-203ENST00000545354 PRR14LQ5THK1 2151 aa3.29□□□□□ -1.88
UBE4A-203ENST00000545354 LINC00959A0A1B0GUT2 108 aa3.29□□□□□ -1.88
UBE4A-203ENST00000545354 P0C880 135 aa3.29□□□□□ -1.88
UBE4A-203ENST00000545354 MTORP42345 2549 aa3.28□□□□□ -1.88
UBE4A-203ENST00000545354 KRTAP26-1Q6PEX3 210 aa3.28□□□□□ -1.88
UBE4A-203ENST00000545354 PDZD2O15018 2839 aa3.28□□□□□ -1.88
UBE4A-203ENST00000545354 ICE1Q9Y2F5 2266 aa3.27□□□□□ -1.89
UBE4A-203ENST00000545354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.27□□□□□ -1.89
UBE4A-203ENST00000545354 LINC00612Q8N6U2 182 aa3.27□□□□□ -1.89
UBE4A-203ENST00000545354 ZNF861PO60384 105 aa3.26□□□□□ -1.89
UBE4A-203ENST00000545354 TLX1NBP0CAT3 122 aa3.26□□□□□ -1.89
UBE4A-203ENST00000545354 ST20-AS1Q8NBB2 130 aa3.26□□□□□ -1.89
UBE4A-203ENST00000545354 DHRS4-AS1Q9P1J3 65 aa3.26□□□□□ -1.89
UBE4A-203ENST00000545354 F8P00451 2351 aa3.26□□□□□ -1.89
UBE4A-203ENST00000545354 DIDO1Q9BTC0 2240 aaKnown RBP3.26□□□□□ -1.89
UBE4A-203ENST00000545354 NAV3Q8IVL0 2385 aa3.26□□□□□ -1.89
UBE4A-203ENST00000545354 CSMD2Q7Z408 3487 aa3.26□□□□□ -1.89
UBE4A-203ENST00000545354 Q8IZM0 81 aa3.26□□□□□ -1.89
UBE4A-203ENST00000545354 CR1P17927 2039 aa3.26□□□□□ -1.89
UBE4A-203ENST00000545354 ZNF407Q9C0G0 2248 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 IGKV3-7A0A075B6H7 116 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 A0A1B0GU69 56 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 A0A1B0GVX0 72 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 Q8N9L7 120 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 HIVEP1P15822 2718 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 A0A096LNT2 108 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 M0R2N4 97 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 PRB2P02812 416 aaPredicted RBP3.25□□□□□ -1.89
UBE4A-203ENST00000545354 PRB3Q04118 309 aaPredicted RBP3.25□□□□□ -1.89
UBE4A-203ENST00000545354 C10orf55Q5SWW7 151 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 Q5W150 140 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 C4orf3Q8WVX3 66 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 TP53AIP1Q9HCN2 124 aa3.25□□□□□ -1.89
UBE4A-203ENST00000545354 AKAP9Q99996 3911 aa3.24□□□□□ -1.89
UBE4A-203ENST00000545354 SPG11Q96JI7 2443 aa3.24□□□□□ -1.89
UBE4A-203ENST00000545354 SDK2Q58EX2 2172 aa3.24□□□□□ -1.89
UBE4A-203ENST00000545354 PCNX1Q96RV3 2341 aa3.24□□□□□ -1.89
UBE4A-203ENST00000545354 IGKV2D-24A0A075B6R9 120 aa3.24□□□□□ -1.89
UBE4A-203ENST00000545354 TRGV1A0A0A0MS02 117 aa3.24□□□□□ -1.89
UBE4A-203ENST00000545354 CIRBP-AS1Q8TBR5 109 aa3.24□□□□□ -1.89
UBE4A-203ENST00000545354 NIPBLQ6KC79 2804 aaeCLIP3.24□□□□□ -1.89
UBE4A-203ENST00000545354 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
UBE4A-203ENST00000545354 ZNRD1Q9P1U0 126 aa3.23□□□□□ -1.89
UBE4A-203ENST00000545354 SPINK14Q6IE38 97 aa3.23□□□□□ -1.89
UBE4A-203ENST00000545354 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
UBE4A-203ENST00000545354 APCP25054 2843 aa3.23□□□□□ -1.89
UBE4A-203ENST00000545354 COX6A2Q02221 97 aa3.22□□□□□ -1.89
UBE4A-203ENST00000545354 KRTAP21-3Q3LHN1 58 aa3.22□□□□□ -1.89
UBE4A-203ENST00000545354 ABCA2Q9BZC7 2435 aa3.22□□□□□ -1.89
UBE4A-203ENST00000545354 A8MUU9 505 aa3.22□□□□□ -1.89
UBE4A-203ENST00000545354 KRTAP10-2P60368 255 aa3.22□□□□□ -1.89
UBE4A-203ENST00000545354 TACC2O95359 2948 aa3.21□□□□□ -1.9
UBE4A-203ENST00000545354 IGLV5-48A0A075B6I7 105 aa3.21□□□□□ -1.9
UBE4A-203ENST00000545354 IGKV3OR2-268A0A0C4DH90 116 aa3.21□□□□□ -1.9
UBE4A-203ENST00000545354 INSP01308 110 aa3.21□□□□□ -1.9
UBE4A-203ENST00000545354 ACYP2P14621 99 aa3.21□□□□□ -1.9
UBE4A-203ENST00000545354 MRGPRG-AS1Q2M3A8 158 aa3.21□□□□□ -1.9
UBE4A-203ENST00000545354 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
UBE4A-203ENST00000545354 RP1L1Q8IWN7 2480 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms