RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 DIRC1Q969H9 104 aa7.2□□□□□ -1.26
SNHG1-221ENST00000544983 UBE2AP49459 152 aa7.19□□□□□ -1.26
SNHG1-221ENST00000544983 TRAV23DV6A0A075B6W5 121 aa7.18□□□□□ -1.26
SNHG1-221ENST00000544983 TMEM238LA0A1B0GVL6 79 aa7.18□□□□□ -1.26
SNHG1-221ENST00000544983 A4D1N5 150 aa7.18□□□□□ -1.26
SNHG1-221ENST00000544983 A6NJY4 79 aa7.18□□□□□ -1.26
SNHG1-221ENST00000544983 HINT1P49773 126 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-221ENST00000544983 ETDCA0A1B0GVM5 59 aa7.17□□□□□ -1.26
SNHG1-221ENST00000544983 A6NDN8 102 aa7.17□□□□□ -1.26
SNHG1-221ENST00000544983 ZNF73O43830 326 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-221ENST00000544983 HNRNPA3P51991 378 aaKnown RBP7.17□□□□□ -1.26
SNHG1-221ENST00000544983 HSD52Q0P140 79 aa7.17□□□□□ -1.26
SNHG1-221ENST00000544983 FAM19A1Q7Z5A9 133 aa7.17□□□□□ -1.26
SNHG1-221ENST00000544983 KRTAP13-1Q8IUC0 172 aa7.17□□□□□ -1.26
SNHG1-221ENST00000544983 CEND1Q8N111 149 aa7.17□□□□□ -1.26
SNHG1-221ENST00000544983 FLG2Q5D862 2391 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-221ENST00000544983 KRTAP4-16G5E9R7 235 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-221ENST00000544983 C12orf57Q99622 126 aa7.16□□□□□ -1.26
SNHG1-221ENST00000544983 TSTD3H0UI37 97 aa7.15□□□□□ -1.26
SNHG1-221ENST00000544983 TRBV7-6A0A0J9YX20 115 aa7.14□□□□□ -1.27
SNHG1-221ENST00000544983 OXTP01178 125 aa7.14□□□□□ -1.27
SNHG1-221ENST00000544983 A0A0B4J2C4 111 aa7.13□□□□□ -1.27
SNHG1-221ENST00000544983 B5MCH6 92 aa7.13□□□□□ -1.27
SNHG1-221ENST00000544983 Q6ZRX8 168 aa7.13□□□□□ -1.27
SNHG1-221ENST00000544983 CFC1BP0CG36 223 aa7.12□□□□□ -1.27
SNHG1-221ENST00000544983 CFC1P0CG37 223 aa7.12□□□□□ -1.27
SNHG1-221ENST00000544983 PRLHP81277 87 aa7.12□□□□□ -1.27
SNHG1-221ENST00000544983 RAB37Q96AX2 223 aa7.12□□□□□ -1.27
SNHG1-221ENST00000544983 PRO1933Q9H354 126 aa7.12□□□□□ -1.27
SNHG1-221ENST00000544983 VAMP3Q15836 100 aa7.11□□□□□ -1.27
SNHG1-221ENST00000544983 A0A1B0GWB2 263 aa7.1□□□□□ -1.27
SNHG1-221ENST00000544983 KRTAP29-1A8MX34 341 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-221ENST00000544983 RPL13AP40429 203 aaKnown RBP7.1□□□□□ -1.27
SNHG1-221ENST00000544983 C6orf99Q4VX62 202 aa7.1□□□□□ -1.27
SNHG1-221ENST00000544983 SMIM11BQ8TCY0 68 aa7.1□□□□□ -1.27
SNHG1-221ENST00000544983 HIGD2AQ9BW72 106 aa7.1□□□□□ -1.27
SNHG1-221ENST00000544983 DHRS4-AS1Q9P1J3 65 aa7.1□□□□□ -1.27
SNHG1-221ENST00000544983 ZNF706Q9Y5V0 76 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-221ENST00000544983 M0R143 59 aa7.09□□□□□ -1.27
SNHG1-221ENST00000544983 COX7BP24311 80 aa7.09□□□□□ -1.27
SNHG1-221ENST00000544983 FXYD2P54710 66 aa7.09□□□□□ -1.27
SNHG1-221ENST00000544983 ELOF1P60002 83 aaKnown RBP7.09□□□□□ -1.27
SNHG1-221ENST00000544983 PRO1854Q9UHT4 67 aa7.09□□□□□ -1.27
SNHG1-221ENST00000544983 BVES-AS1Q5T3Y7 98 aa7.08□□□□□ -1.28
SNHG1-221ENST00000544983 LINC01600Q96MT4 127 aa7.08□□□□□ -1.28
SNHG1-221ENST00000544983 SMCR5Q8TEV8 140 aa7.07□□□□□ -1.28
SNHG1-221ENST00000544983 Q9BRP9 147 aa7.07□□□□□ -1.28
SNHG1-221ENST00000544983 NHP2Q9NX24 153 aaKnown RBP7.07□□□□□ -1.28
SNHG1-221ENST00000544983 FAM229BQ4G0N7 80 aa7.06□□□□□ -1.28
SNHG1-221ENST00000544983 SLC25A20O43772 301 aa7.05□□□□□ -1.28
SNHG1-221ENST00000544983 KRTAP1-4P0C5Y4 121 aa7.05□□□□□ -1.28
SNHG1-221ENST00000544983 CTAG1AP78358 180 aa7.05□□□□□ -1.28
SNHG1-221ENST00000544983 SNCGO76070 127 aa7.04□□□□□ -1.28
SNHG1-221ENST00000544983 SPRR4Q96PI1 79 aa7.04□□□□□ -1.28
SNHG1-221ENST00000544983 MYCBP2O75592 4640 aa7.04□□□□□ -1.28
SNHG1-221ENST00000544983 PKHD1L1Q86WI1 4243 aa7.03□□□□□ -1.28
SNHG1-221ENST00000544983 H0YGX0 51 aa7.03□□□□□ -1.28
SNHG1-221ENST00000544983 H7C2G1 150 aa7.03□□□□□ -1.28
SNHG1-221ENST00000544983 J3QL48 77 aa7.03□□□□□ -1.28
SNHG1-221ENST00000544983 CRYGAP11844 174 aa7.03□□□□□ -1.28
SNHG1-221ENST00000544983 Q1RN00 199 aa7.03□□□□□ -1.28
SNHG1-221ENST00000544983 ERC2-IT1O76042 136 aa7.01□□□□□ -1.29
SNHG1-221ENST00000544983 LINC00483Q53H64 154 aa7.01□□□□□ -1.29
SNHG1-221ENST00000544983 LINC00575Q6W349 94 aa7.01□□□□□ -1.29
SNHG1-221ENST00000544983 COX6CP09669 75 aa7□□□□□ -1.29
SNHG1-221ENST00000544983 KRTAP10-8P60410 259 aa7□□□□□ -1.29
SNHG1-221ENST00000544983 A0A1B0GX51 115 aa6.99□□□□□ -1.29
SNHG1-221ENST00000544983 hADV29S1A0JD25 119 aa6.99□□□□□ -1.29
SNHG1-221ENST00000544983 K7ERJ3 54 aa6.98□□□□□ -1.29
SNHG1-221ENST00000544983 MT1HL1P0DM35 61 aa6.98□□□□□ -1.29
SNHG1-221ENST00000544983 SPRR1BP22528 89 aa6.98□□□□□ -1.29
SNHG1-221ENST00000544983 GAGE2AQ6NT46 116 aa6.98□□□□□ -1.29
SNHG1-221ENST00000544983 PRR26Q8N8Z3 221 aa6.98□□□□□ -1.29
SNHG1-221ENST00000544983 TEX49A0A1B0GTD5 131 aa6.97□□□□□ -1.29
SNHG1-221ENST00000544983 TRIAP1O43715 76 aa6.97□□□□□ -1.29
SNHG1-221ENST00000544983 TSPAN13O95857 204 aa6.97□□□□□ -1.29
SNHG1-221ENST00000544983 GHRHP01286 108 aa6.97□□□□□ -1.29
SNHG1-221ENST00000544983 PSMB2P49721 201 aa6.97□□□□□ -1.29
SNHG1-221ENST00000544983 LRP1Q07954 4544 aaKnown RBP6.96□□□□□ -1.29
SNHG1-221ENST00000544983 IGLV5-48A0A075B6I7 105 aa6.96□□□□□ -1.3
SNHG1-221ENST00000544983 A0A087X002 238 aa6.96□□□□□ -1.3
SNHG1-221ENST00000544983 OCIAD2Q56VL3 154 aa6.96□□□□□ -1.3
SNHG1-221ENST00000544983 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-221ENST00000544983 PPDPFLQ8WWR9 84 aa6.96□□□□□ -1.3
SNHG1-221ENST00000544983 ANAPC11Q9NYG5 84 aa6.96□□□□□ -1.3
SNHG1-221ENST00000544983 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
SNHG1-221ENST00000544983 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
SNHG1-221ENST00000544983 LAMTOR3Q9UHA4 124 aa6.94□□□□□ -1.3
SNHG1-221ENST00000544983 FAT3Q8TDW7 4589 aa6.93□□□□□ -1.3
SNHG1-221ENST00000544983 H3BQ85 93 aa6.93□□□□□ -1.3
SNHG1-221ENST00000544983 KRTAP13-2Q52LG2 175 aa6.93□□□□□ -1.3
SNHG1-221ENST00000544983 Q6ZQY7 126 aa6.93□□□□□ -1.3
SNHG1-221ENST00000544983 SSBP3-AS1Q7Z2R9 100 aa6.93□□□□□ -1.3
SNHG1-221ENST00000544983 SCGB1C2P0DMR2 95 aa6.92□□□□□ -1.3
SNHG1-221ENST00000544983 BATFQ16520 125 aa6.92□□□□□ -1.3
SNHG1-221ENST00000544983 LYRM7Q5U5X0 104 aa6.92□□□□□ -1.3
SNHG1-221ENST00000544983 DEFB105AQ8NG35 78 aa6.92□□□□□ -1.3
SNHG1-221ENST00000544983 LINC01547P58512 204 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-221ENST00000544983 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
SNHG1-221ENST00000544983 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms