RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 M0R2T5 61 aa13.21□□□□□ -0.3
BPTF-208ENST00000544778 TLN2Q9Y4G6 2542 aa13.2□□□□□ -0.3
BPTF-208ENST00000544778 A0A087WTM6 91 aa13.2□□□□□ -0.3
BPTF-208ENST00000544778 F8P00451 2351 aa13.2□□□□□ -0.3
BPTF-208ENST00000544778 NCOR2Q9Y618 2525 aa13.19□□□□□ -0.3
BPTF-208ENST00000544778 ACANP16112 2415 aa13.18□□□□□ -0.3
BPTF-208ENST00000544778 ERC2-IT1O76042 136 aa13.17□□□□□ -0.3
BPTF-208ENST00000544778 IGLV7-43P04211 117 aa13.15□□□□□ -0.3
BPTF-208ENST00000544778 Q8N377 158 aa13.14□□□□□ -0.31
BPTF-208ENST00000544778 LINC00528Q8N1L1 170 aa13.12□□□□□ -0.31
BPTF-208ENST00000544778 FAM104AQ969W3 186 aa13.12□□□□□ -0.31
BPTF-208ENST00000544778 C10orf142B7Z368 130 aa13.11□□□□□ -0.31
BPTF-208ENST00000544778 LITAFQ99732 161 aa13.11□□□□□ -0.31
BPTF-208ENST00000544778 ANKRD17O75179 2603 aaKnown RBP13.1□□□□□ -0.31
BPTF-208ENST00000544778 PSORS1C2Q9UIG4 136 aa13.09□□□□□ -0.31
BPTF-208ENST00000544778 Q6ZSA8 131 aa13.09□□□□□ -0.31
BPTF-208ENST00000544778 CAMK2N1Q7Z7J9 78 aa13.09□□□□□ -0.31
BPTF-208ENST00000544778 LINC00336Q6ZUF6 198 aa13.06□□□□□ -0.32
BPTF-208ENST00000544778 LINC00483Q53H64 154 aa13.05□□□□□ -0.32
BPTF-208ENST00000544778 KTN1-AS1Q86SY8 53 aa12.98□□□□□ -0.33
BPTF-208ENST00000544778 C9orf163Q8N9P6 203 aa12.98□□□□□ -0.33
BPTF-208ENST00000544778 C19orf73Q9NVV2 129 aa12.98□□□□□ -0.33
BPTF-208ENST00000544778 SPRR4Q96PI1 79 aa12.98□□□□□ -0.33
BPTF-208ENST00000544778 LCA10Q71F78 164 aa12.96□□□□□ -0.33
BPTF-208ENST00000544778 CR1P17927 2039 aa12.96□□□□□ -0.34
BPTF-208ENST00000544778 CD164Q04900 197 aa12.95□□□□□ -0.34
BPTF-208ENST00000544778 PRR34Q9NV39 138 aa12.95□□□□□ -0.34
BPTF-208ENST00000544778 PLA2G2DQ9UNK4 145 aa12.94□□□□□ -0.34
BPTF-208ENST00000544778 SETD2Q9BYW2 2564 aaPredicted RBP12.94□□□□□ -0.34
BPTF-208ENST00000544778 PRR26Q8N8Z3 221 aa12.94□□□□□ -0.34
BPTF-208ENST00000544778 PIEZO1Q92508 2521 aa12.94□□□□□ -0.34
BPTF-208ENST00000544778 KRTAP10-3P60369 221 aa12.93□□□□□ -0.34
BPTF-208ENST00000544778 TLX1NBP0CAT3 122 aa12.92□□□□□ -0.34
BPTF-208ENST00000544778 CASC10Q5T4H9 136 aa12.92□□□□□ -0.34
BPTF-208ENST00000544778 IGLV7-46A0A075B6I9 117 aa12.9□□□□□ -0.34
BPTF-208ENST00000544778 EIF4EBP3O60516 100 aaPredicted RBP12.9□□□□□ -0.34
BPTF-208ENST00000544778 PKD1L2Q7Z442 2459 aa12.89□□□□□ -0.35
BPTF-208ENST00000544778 KLKP1Q107X0 134 aa12.89□□□□□ -0.35
BPTF-208ENST00000544778 USP9XQ93008 2570 aaPredicted RBP12.88□□□□□ -0.35
BPTF-208ENST00000544778 ZNF462Q96JM2 2506 aa12.87□□□□□ -0.35
BPTF-208ENST00000544778 LINC00612Q8N6U2 182 aa12.86□□□□□ -0.35
BPTF-208ENST00000544778 Q1T7F1 81 aa12.86□□□□□ -0.35
BPTF-208ENST00000544778 H7BZZ5 65 aa12.83□□□□□ -0.36
BPTF-208ENST00000544778 SPANXA2-OT1Q8N9U9 137 aa12.79□□□□□ -0.36
BPTF-208ENST00000544778 CNBPP62633 177 aaKnown RBP12.78□□□□□ -0.36
BPTF-208ENST00000544778 A0A1B0GU33 70 aa12.77□□□□□ -0.37
BPTF-208ENST00000544778 GIG44P09565 113 aaPredicted RBP12.77□□□□□ -0.37
BPTF-208ENST00000544778 A0A1W2PNM2 257 aa12.76□□□□□ -0.37
BPTF-208ENST00000544778 TNP2Q05952 138 aa12.76□□□□□ -0.37
BPTF-208ENST00000544778 S4R3F8 94 aa12.74□□□□□ -0.37
BPTF-208ENST00000544778 HRES1P13985 223 aa12.72□□□□□ -0.37
BPTF-208ENST00000544778 ANKRD11Q6UB99 2663 aaPredicted RBP12.71□□□□□ -0.38
BPTF-208ENST00000544778 WIPF1O43516 503 aa12.7□□□□□ -0.38
BPTF-208ENST00000544778 CENPFP49454 3210 aa12.7□□□□□ -0.38
BPTF-208ENST00000544778 KLK9Q2XQG4 91 aa12.66□□□□□ -0.38
BPTF-208ENST00000544778 CSAG1Q6PB30 78 aa12.62□□□□□ -0.39
BPTF-208ENST00000544778 MTORP42345 2549 aa12.59□□□□□ -0.39
BPTF-208ENST00000544778 SPTBN4Q9H254 2564 aa12.58□□□□□ -0.4
BPTF-208ENST00000544778 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.58□□□□□ -0.4
BPTF-208ENST00000544778 USP9YO00507 2555 aaPredicted RBP12.56□□□□□ -0.4
BPTF-208ENST00000544778 CHD8Q9HCK8 2581 aa12.56□□□□□ -0.4
BPTF-208ENST00000544778 EP400Q96L91 3159 aa12.55□□□□□ -0.4
BPTF-208ENST00000544778 DMAC1Q96GE9 116 aa12.54□□□□□ -0.4
BPTF-208ENST00000544778 R4GN34 69 aa12.54□□□□□ -0.4
BPTF-208ENST00000544778 POLQO75417 2590 aa12.54□□□□□ -0.4
BPTF-208ENST00000544778 BPTFQ12830 3046 aa12.54□□□□□ -0.4
BPTF-208ENST00000544778 ZCCHC13Q8WW36 166 aaKnown RBP12.51□□□□□ -0.41
BPTF-208ENST00000544778 A0A096LNT2 108 aa12.51□□□□□ -0.41
BPTF-208ENST00000544778 A0A0A0MQY5 61 aa12.49□□□□□ -0.41
BPTF-208ENST00000544778 OCR1Q9BZK8 76 aa12.46□□□□□ -0.42
BPTF-208ENST00000544778 SPINK7P58062 85 aa12.45□□□□□ -0.42
BPTF-208ENST00000544778 USP24Q9UPU5 2620 aa12.42□□□□□ -0.42
BPTF-208ENST00000544778 FAM229BQ4G0N7 80 aa12.41□□□□□ -0.42
BPTF-208ENST00000544778 Q75L30 129 aa12.41□□□□□ -0.42
BPTF-208ENST00000544778 FLG2Q5D862 2391 aaPredicted RBP12.4□□□□□ -0.42
BPTF-208ENST00000544778 Q8N9P0 234 aaPredicted RBP12.39□□□□□ -0.43
BPTF-208ENST00000544778 SEC61BP60468 96 aaKnown RBP12.38□□□□□ -0.43
BPTF-208ENST00000544778 FASNP49327 2511 aaKnown RBP12.36□□□□□ -0.43
BPTF-208ENST00000544778 PRAC1Q96KF2 57 aa12.35□□□□□ -0.43
BPTF-208ENST00000544778 PLAC4Q8WY50 150 aa12.35□□□□□ -0.43
BPTF-208ENST00000544778 KRTAP1-3Q8IUG1 177 aa12.34□□□□□ -0.43
BPTF-208ENST00000544778 H1FX-AS1Q4G0G2 97 aa12.33□□□□□ -0.44
BPTF-208ENST00000544778 Q5VSD8 79 aa12.32□□□□□ -0.44
BPTF-208ENST00000544778 Q5W150 140 aa12.29□□□□□ -0.44
BPTF-208ENST00000544778 PLAC8Q9NZF1 115 aa12.29□□□□□ -0.44
BPTF-208ENST00000544778 M0QZ58 72 aa12.28□□□□□ -0.44
BPTF-208ENST00000544778 MMP24-AS1A0A0U1RRL7 71 aa12.28□□□□□ -0.44
BPTF-208ENST00000544778 H3BS24 57 aa12.25□□□□□ -0.45
BPTF-208ENST00000544778 KRTAP1-1Q07627 177 aa12.25□□□□□ -0.45
BPTF-208ENST00000544778 GOLGB1Q14789 3259 aaKnown RBP12.24□□□□□ -0.45
BPTF-208ENST00000544778 LINC01558Q9Y6Z2 57 aa12.23□□□□□ -0.45
BPTF-208ENST00000544778 CEP295Q9C0D2 2601 aa12.21□□□□□ -0.45
BPTF-208ENST00000544778 ROMO1P60602 79 aa12.19□□□□□ -0.46
BPTF-208ENST00000544778 RPL37P61927 97 aaKnown RBP12.14□□□□□ -0.47
BPTF-208ENST00000544778 ADM2Q7Z4H4 148 aa12.14□□□□□ -0.47
BPTF-208ENST00000544778 Q5VV11 94 aa12.06□□□□□ -0.48
BPTF-208ENST00000544778 MGAM2Q2M2H8 2515 aa12.03□□□□□ -0.48
BPTF-208ENST00000544778 LINC00472Q9H8W2 130 aa12.01□□□□□ -0.49
BPTF-208ENST00000544778 SPATA8Q6RVD6 105 aa12.01□□□□□ -0.49
BPTF-208ENST00000544778 KRTAP10-1P60331 282 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms