RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
CPSF7-223ENST00000544669 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
CPSF7-223ENST00000544669 LINC00588Q9Y4M8 146 aa8.5□□□□□ -1.05
CPSF7-223ENST00000544669 M0R2N4 97 aa8.49□□□□□ -1.05
CPSF7-223ENST00000544669 ERC2-IT1O76042 136 aa8.49□□□□□ -1.05
CPSF7-223ENST00000544669 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
CPSF7-223ENST00000544669 DPH3Q96FX2 82 aa8.49□□□□□ -1.05
CPSF7-223ENST00000544669 SERTAD4-AS1Q5TG53 156 aa8.47□□□□□ -1.05
CPSF7-223ENST00000544669 C20orf197Q8N268 126 aa8.47□□□□□ -1.05
CPSF7-223ENST00000544669 PKIGQ9Y2B9 76 aa8.47□□□□□ -1.05
CPSF7-223ENST00000544669 BPY2O14599 106 aa8.46□□□□□ -1.06
CPSF7-223ENST00000544669 Q8N377 158 aa8.46□□□□□ -1.06
CPSF7-223ENST00000544669 OTOGQ6ZRI0 2925 aa8.46□□□□□ -1.06
CPSF7-223ENST00000544669 KRTAP4-16G5E9R7 235 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-223ENST00000544669 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
CPSF7-223ENST00000544669 TEP1Q99973 2627 aaKnown RBP8.45□□□□□ -1.06
CPSF7-223ENST00000544669 ATP5EP56381 51 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-223ENST00000544669 DEFB105AQ8NG35 78 aa8.43□□□□□ -1.06
CPSF7-223ENST00000544669 C14orf177Q52M58 125 aa8.43□□□□□ -1.06
CPSF7-223ENST00000544669 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
CPSF7-223ENST00000544669 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
CPSF7-223ENST00000544669 VWFP04275 2813 aa8.42□□□□□ -1.06
CPSF7-223ENST00000544669 REG3GQ6UW15 175 aa8.41□□□□□ -1.06
CPSF7-223ENST00000544669 F8WEM9 126 aa8.4□□□□□ -1.06
CPSF7-223ENST00000544669 C1orf137Q5JT78 98 aa8.4□□□□□ -1.06
CPSF7-223ENST00000544669 CYSTM1Q9H1C7 97 aa8.4□□□□□ -1.06
CPSF7-223ENST00000544669 ATRQ13535 2644 aa8.4□□□□□ -1.06
CPSF7-223ENST00000544669 HECTD1Q9ULT8 2610 aa8.4□□□□□ -1.06
CPSF7-223ENST00000544669 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.07
CPSF7-223ENST00000544669 TNP2Q05952 138 aa8.4□□□□□ -1.07
CPSF7-223ENST00000544669 Q8NBF4 154 aa8.4□□□□□ -1.07
CPSF7-223ENST00000544669 SPRR4Q96PI1 79 aa8.4□□□□□ -1.07
CPSF7-223ENST00000544669 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
CPSF7-223ENST00000544669 FAM19A5Q7Z5A7 132 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-223ENST00000544669 Q9BRP9 147 aa8.39□□□□□ -1.07
CPSF7-223ENST00000544669 H7BZZ5 65 aa8.38□□□□□ -1.07
CPSF7-223ENST00000544669 UBE2BP63146 152 aa8.38□□□□□ -1.07
CPSF7-223ENST00000544669 SERP1Q9Y6X1 66 aa8.38□□□□□ -1.07
CPSF7-223ENST00000544669 C16orf90A8MZG2 172 aa8.38□□□□□ -1.07
CPSF7-223ENST00000544669 IGKV4-1P06312 121 aa8.38□□□□□ -1.07
CPSF7-223ENST00000544669 SCXQ7RTU7 201 aa8.37□□□□□ -1.07
CPSF7-223ENST00000544669 HIVEP1P15822 2718 aa8.37□□□□□ -1.07
CPSF7-223ENST00000544669 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
CPSF7-223ENST00000544669 TENM1Q9UKZ4 2725 aa8.36□□□□□ -1.07
CPSF7-223ENST00000544669 FAM168BA1KXE4 195 aa8.35□□□□□ -1.07
CPSF7-223ENST00000544669 K7EIL1 84 aa8.35□□□□□ -1.07
CPSF7-223ENST00000544669 PSCAO43653 123 aa8.35□□□□□ -1.07
CPSF7-223ENST00000544669 TMEM254Q8TBM7 123 aa8.34□□□□□ -1.07
CPSF7-223ENST00000544669 A0A1W2PNM2 257 aa8.33□□□□□ -1.08
CPSF7-223ENST00000544669 CASC10Q5T4H9 136 aa8.33□□□□□ -1.08
CPSF7-223ENST00000544669 H0Y9J4 135 aa8.32□□□□□ -1.08
CPSF7-223ENST00000544669 KRTAP7-1Q8IUC3 87 aa8.32□□□□□ -1.08
CPSF7-223ENST00000544669 UBE2DNLQ8IWF7 75 aa8.32□□□□□ -1.08
CPSF7-223ENST00000544669 OCR1Q9BZK8 76 aa8.32□□□□□ -1.08
CPSF7-223ENST00000544669 IGLV8-61A0A075B6I0 122 aa8.31□□□□□ -1.08
CPSF7-223ENST00000544669 LINC00474Q9P2X8 69 aa8.31□□□□□ -1.08
CPSF7-223ENST00000544669 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
CPSF7-223ENST00000544669 ST20-AS1Q8NBB2 130 aa8.3□□□□□ -1.08
CPSF7-223ENST00000544669 SNURFQ9Y675 71 aa8.3□□□□□ -1.08
CPSF7-223ENST00000544669 C5orf47Q569G3 176 aa8.29□□□□□ -1.08
CPSF7-223ENST00000544669 A0A0U1RQV1 116 aa8.27□□□□□ -1.09
CPSF7-223ENST00000544669 SMIM29Q86T20 159 aa8.27□□□□□ -1.09
CPSF7-223ENST00000544669 A0A096LNI7 61 aa8.26□□□□□ -1.09
CPSF7-223ENST00000544669 SMIM26A0A096LP01 95 aa8.26□□□□□ -1.09
CPSF7-223ENST00000544669 Q8N9L7 120 aa8.26□□□□□ -1.09
CPSF7-223ENST00000544669 LINC00476Q8WZB0 136 aa8.26□□□□□ -1.09
CPSF7-223ENST00000544669 SPRR1BP22528 89 aa8.25□□□□□ -1.09
CPSF7-223ENST00000544669 APLNQ9ULZ1 77 aa8.25□□□□□ -1.09
CPSF7-223ENST00000544669 PRB2P02812 416 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-223ENST00000544669 LCE6AA0A183 80 aa8.24□□□□□ -1.09
CPSF7-223ENST00000544669 IGKV2-24A0A0C4DH68 120 aa8.23□□□□□ -1.09
CPSF7-223ENST00000544669 UBE2AP49459 152 aa8.23□□□□□ -1.09
CPSF7-223ENST00000544669 DSCR10P59022 87 aa8.22□□□□□ -1.09
CPSF7-223ENST00000544669 IGFL1Q6UW32 110 aa8.22□□□□□ -1.09
CPSF7-223ENST00000544669 C9orf163Q8N9P6 203 aa8.22□□□□□ -1.09
CPSF7-223ENST00000544669 F8P00451 2351 aa8.22□□□□□ -1.09
CPSF7-223ENST00000544669 A0A1W2PNN7 141 aa8.22□□□□□ -1.09
CPSF7-223ENST00000544669 NUPR2A6NF83 97 aa8.22□□□□□ -1.09
CPSF7-223ENST00000544669 B9D2Q9BPU9 175 aa8.22□□□□□ -1.09
CPSF7-223ENST00000544669 TRRAPQ9Y4A5 3859 aa8.21□□□□□ -1.09
CPSF7-223ENST00000544669 HCG22E2RYF7 251 aa8.21□□□□□ -1.1
CPSF7-223ENST00000544669 OXTP01178 125 aa8.21□□□□□ -1.1
CPSF7-223ENST00000544669 HIGD2AQ9BW72 106 aa8.21□□□□□ -1.1
CPSF7-223ENST00000544669 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-223ENST00000544669 NDUFB1O75438 58 aa8.19□□□□□ -1.1
CPSF7-223ENST00000544669 PRLHP81277 87 aa8.19□□□□□ -1.1
CPSF7-223ENST00000544669 Q5XG85 94 aa8.18□□□□□ -1.1
CPSF7-223ENST00000544669 KRTAP1-5Q9BYS1 174 aa8.18□□□□□ -1.1
CPSF7-223ENST00000544669 K7EQZ3 153 aa8.17□□□□□ -1.1
CPSF7-223ENST00000544669 NBDYA0A0U1RRE5 68 aa8.17□□□□□ -1.1
CPSF7-223ENST00000544669 RPL37AP61513 92 aaKnown RBP8.16□□□□□ -1.1
CPSF7-223ENST00000544669 FAM30AQ9NZY2 134 aa8.16□□□□□ -1.1
CPSF7-223ENST00000544669 A0A087WSZ3 146 aa8.15□□□□□ -1.1
CPSF7-223ENST00000544669 H3BPC8 53 aa8.15□□□□□ -1.1
CPSF7-223ENST00000544669 MP68P56378 58 aa8.15□□□□□ -1.11
CPSF7-223ENST00000544669 LRCOL1A6NCL2 159 aa8.13□□□□□ -1.11
CPSF7-223ENST00000544669 PHF5AQ7RTV0 110 aaKnown RBP8.13□□□□□ -1.11
CPSF7-223ENST00000544669 DNAH3Q8TD57 4116 aa8.12□□□□□ -1.11
CPSF7-223ENST00000544669 C4orf26Q17RF5 130 aa8.12□□□□□ -1.11
CPSF7-223ENST00000544669 TENM3Q9P273 2699 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms