RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 KRTAP10-1P60331 282 aa6□□□□□ -1.45
YBX3-215ENST00000544504 LYRM7Q5U5X0 104 aa6□□□□□ -1.45
YBX3-215ENST00000544504 C7orf33Q8WU49 177 aa6□□□□□ -1.45
YBX3-215ENST00000544504 LINC00167Q96N53 147 aa6□□□□□ -1.45
YBX3-215ENST00000544504 TRAV23DV6A0A075B6W5 121 aa5.99□□□□□ -1.45
YBX3-215ENST00000544504 TRBV10-3A0A0K0K1G6 114 aa5.99□□□□□ -1.45
YBX3-215ENST00000544504 KRTAP29-1A8MX34 341 aaPredicted RBP5.99□□□□□ -1.45
YBX3-215ENST00000544504 H7C2G1 150 aa5.99□□□□□ -1.45
YBX3-215ENST00000544504 PRYO14603 147 aa5.99□□□□□ -1.45
YBX3-215ENST00000544504 SMR3BP02814 79 aaPredicted RBP5.99□□□□□ -1.45
YBX3-215ENST00000544504 COX6CP09669 75 aa5.99□□□□□ -1.45
YBX3-215ENST00000544504 RPL28P46779 137 aaKnown RBP5.99□□□□□ -1.45
YBX3-215ENST00000544504 UBE2BP63146 152 aa5.99□□□□□ -1.45
YBX3-215ENST00000544504 VAMP3Q15836 100 aa5.99□□□□□ -1.45
YBX3-215ENST00000544504 KCNQ1DNQ9H478 68 aa5.99□□□□□ -1.45
YBX3-215ENST00000544504 FAT3Q8TDW7 4589 aa5.99□□□□□ -1.45
YBX3-215ENST00000544504 IGLV1-50A0A075B6I6 118 aa5.98□□□□□ -1.45
YBX3-215ENST00000544504 GAGE10A6NGK3 116 aa5.98□□□□□ -1.45
YBX3-215ENST00000544504 PANO1I0J062 215 aa5.98□□□□□ -1.45
YBX3-215ENST00000544504 PSMB2P49721 201 aa5.98□□□□□ -1.45
YBX3-215ENST00000544504 KRTAP7-1Q8IUC3 87 aa5.98□□□□□ -1.45
YBX3-215ENST00000544504 TRBV7-6A0A0J9YX20 115 aa5.97□□□□□ -1.45
YBX3-215ENST00000544504 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
YBX3-215ENST00000544504 H0YGX0 51 aa5.97□□□□□ -1.45
YBX3-215ENST00000544504 SNCGO76070 127 aa5.97□□□□□ -1.45
YBX3-215ENST00000544504 TSPAN13O95857 204 aa5.97□□□□□ -1.45
YBX3-215ENST00000544504 SMIM11BQ8TCY0 68 aa5.97□□□□□ -1.45
YBX3-215ENST00000544504 DIRC1Q969H9 104 aa5.97□□□□□ -1.45
YBX3-215ENST00000544504 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
YBX3-215ENST00000544504 RPL37AP8A6NKH3 93 aa5.96□□□□□ -1.46
YBX3-215ENST00000544504 TAX1BP3O14907 124 aa5.96□□□□□ -1.46
YBX3-215ENST00000544504 ZNF73O43830 326 aaPredicted RBP5.96□□□□□ -1.46
YBX3-215ENST00000544504 SCXQ7RTU7 201 aa5.96□□□□□ -1.46
YBX3-215ENST00000544504 PHF5AQ7RTV0 110 aaKnown RBP5.96□□□□□ -1.46
YBX3-215ENST00000544504 CIRBP-AS1Q8TBR5 109 aa5.96□□□□□ -1.46
YBX3-215ENST00000544504 FAM30AQ9NZY2 134 aa5.96□□□□□ -1.46
YBX3-215ENST00000544504 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
YBX3-215ENST00000544504 SCGB1C2P0DMR2 95 aa5.95□□□□□ -1.46
YBX3-215ENST00000544504 C6orf99Q4VX62 202 aa5.95□□□□□ -1.46
YBX3-215ENST00000544504 REG3GQ6UW15 175 aa5.95□□□□□ -1.46
YBX3-215ENST00000544504 H3BUT2 72 aa5.94□□□□□ -1.46
YBX3-215ENST00000544504 FABP2P12104 132 aa5.94□□□□□ -1.46
YBX3-215ENST00000544504 LRP2P98164 4655 aa5.94□□□□□ -1.46
YBX3-215ENST00000544504 TRBV20-1A0A075B6N2 111 aa5.93□□□□□ -1.46
YBX3-215ENST00000544504 A0A1W2PPM0 123 aa5.93□□□□□ -1.46
YBX3-215ENST00000544504 TRIAP1O43715 76 aa5.93□□□□□ -1.46
YBX3-215ENST00000544504 SLC25A20O43772 301 aa5.93□□□□□ -1.46
YBX3-215ENST00000544504 COX7BP24311 80 aa5.93□□□□□ -1.46
YBX3-215ENST00000544504 SPRR1AP35321 89 aa5.93□□□□□ -1.46
YBX3-215ENST00000544504 A0A1B0GX51 115 aa5.92□□□□□ -1.46
YBX3-215ENST00000544504 ELOF1P60002 83 aaKnown RBP5.92□□□□□ -1.46
YBX3-215ENST00000544504 H0Y9J4 135 aa5.91□□□□□ -1.46
YBX3-215ENST00000544504 BCE1O60756 84 aa5.91□□□□□ -1.46
YBX3-215ENST00000544504 PLA2G1BP04054 148 aaKnown RBP5.91□□□□□ -1.46
YBX3-215ENST00000544504 DHRS4-AS1Q9P1J3 65 aa5.91□□□□□ -1.46
YBX3-215ENST00000544504 KRTAP4-16G5E9R7 235 aaPredicted RBP5.9□□□□□ -1.46
YBX3-215ENST00000544504 GHRHP01286 108 aa5.9□□□□□ -1.46
YBX3-215ENST00000544504 UBE2AP49459 152 aa5.9□□□□□ -1.46
YBX3-215ENST00000544504 HAMPP81172 84 aa5.9□□□□□ -1.46
YBX3-215ENST00000544504 Q6ZRX8 168 aa5.9□□□□□ -1.46
YBX3-215ENST00000544504 FAM19A1Q7Z5A9 133 aa5.9□□□□□ -1.46
YBX3-215ENST00000544504 NAA38Q9BRA0 125 aaKnown RBP5.9□□□□□ -1.46
YBX3-215ENST00000544504 B5MCH6 92 aa5.89□□□□□ -1.47
YBX3-215ENST00000544504 ATXN8Q156A1 80 aa5.89□□□□□ -1.47
YBX3-215ENST00000544504 GTF2H5Q6ZYL4 71 aa5.89□□□□□ -1.47
YBX3-215ENST00000544504 LINC00528Q8N1L1 170 aa5.89□□□□□ -1.47
YBX3-215ENST00000544504 PSORS1C2Q9UIG4 136 aa5.89□□□□□ -1.47
YBX3-215ENST00000544504 DNAL4O96015 105 aa5.88□□□□□ -1.47
YBX3-215ENST00000544504 TRACP01848 142 aa5.88□□□□□ -1.47
YBX3-215ENST00000544504 LINC00575Q6W349 94 aa5.88□□□□□ -1.47
YBX3-215ENST00000544504 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
YBX3-215ENST00000544504 hADV29S1A0JD25 119 aa5.87□□□□□ -1.47
YBX3-215ENST00000544504 H3BQ85 93 aa5.87□□□□□ -1.47
YBX3-215ENST00000544504 LST1O00453 97 aa5.87□□□□□ -1.47
YBX3-215ENST00000544504 OXTP01178 125 aa5.87□□□□□ -1.47
YBX3-215ENST00000544504 C1orf137Q5JT78 98 aa5.87□□□□□ -1.47
YBX3-215ENST00000544504 TCL1BO95988 128 aa5.86□□□□□ -1.47
YBX3-215ENST00000544504 OCIAD2Q56VL3 154 aa5.86□□□□□ -1.47
YBX3-215ENST00000544504 KRTAP11-1Q8IUC1 163 aa5.86□□□□□ -1.47
YBX3-215ENST00000544504 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
YBX3-215ENST00000544504 K7EP34 96 aa5.85□□□□□ -1.47
YBX3-215ENST00000544504 IGLV7-43P04211 117 aa5.85□□□□□ -1.47
YBX3-215ENST00000544504 RPL37AP61513 92 aaKnown RBP5.85□□□□□ -1.47
YBX3-215ENST00000544504 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
YBX3-215ENST00000544504 ZNF861PO60384 105 aa5.84□□□□□ -1.47
YBX3-215ENST00000544504 PRLHP81277 87 aa5.84□□□□□ -1.47
YBX3-215ENST00000544504 KRTAP13-1Q8IUC0 172 aa5.84□□□□□ -1.47
YBX3-215ENST00000544504 HIGD2AQ9BW72 106 aa5.84□□□□□ -1.47
YBX3-215ENST00000544504 ZNF706Q9Y5V0 76 aaPredicted RBP5.84□□□□□ -1.47
YBX3-215ENST00000544504 PKHD1L1Q86WI1 4243 aa5.84□□□□□ -1.48
YBX3-215ENST00000544504 PPDPFLQ8WWR9 84 aa5.83□□□□□ -1.48
YBX3-215ENST00000544504 FAM218AQ96MZ4 157 aa5.83□□□□□ -1.48
YBX3-215ENST00000544504 Q9BRP9 147 aa5.83□□□□□ -1.48
YBX3-215ENST00000544504 A0A1B0GV90 55 aa5.82□□□□□ -1.48
YBX3-215ENST00000544504 SMCR5Q8TEV8 140 aa5.82□□□□□ -1.48
YBX3-215ENST00000544504 ORMDL1Q9P0S3 153 aa5.82□□□□□ -1.48
YBX3-215ENST00000544504 H3BMG7 143 aa5.81□□□□□ -1.48
YBX3-215ENST00000544504 Q6ZQY7 126 aa5.81□□□□□ -1.48
YBX3-215ENST00000544504 C9JAW5 83 aa5.8□□□□□ -1.48
YBX3-215ENST00000544504 H3BT86 120 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms