RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
CHD4-211ENST00000544484 TRAV22A0A0B4J277 110 aa8.46□□□□□ -1.05
CHD4-211ENST00000544484 TRBV7-4A0A0J9YYF1 115 aa8.46□□□□□ -1.06
CHD4-211ENST00000544484 BRCA2P51587 3418 aa8.46□□□□□ -1.06
CHD4-211ENST00000544484 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.06
CHD4-211ENST00000544484 KRTAP1-3Q8IUG1 177 aa8.45□□□□□ -1.06
CHD4-211ENST00000544484 PLA2G1BP04054 148 aaKnown RBP8.45□□□□□ -1.06
CHD4-211ENST00000544484 KCNQ1DNQ9H478 68 aa8.45□□□□□ -1.06
CHD4-211ENST00000544484 A0A1B0GU69 56 aa8.45□□□□□ -1.06
CHD4-211ENST00000544484 K7EQZ3 153 aa8.45□□□□□ -1.06
CHD4-211ENST00000544484 ACYP2P14621 99 aa8.45□□□□□ -1.06
CHD4-211ENST00000544484 Q96NJ1 140 aa8.45□□□□□ -1.06
CHD4-211ENST00000544484 LINC00528Q8N1L1 170 aa8.44□□□□□ -1.06
CHD4-211ENST00000544484 A0A0G2JQZ4 141 aa8.44□□□□□ -1.06
CHD4-211ENST00000544484 A0A1W2PNN7 141 aa8.44□□□□□ -1.06
CHD4-211ENST00000544484 C9orf129Q5T035 196 aaKnown RBP8.43□□□□□ -1.06
CHD4-211ENST00000544484 LAMA2P24043 3122 aaKnown RBP8.42□□□□□ -1.06
CHD4-211ENST00000544484 LINC00612Q8N6U2 182 aa8.41□□□□□ -1.06
CHD4-211ENST00000544484 AKAP13Q12802 2813 aa8.41□□□□□ -1.06
CHD4-211ENST00000544484 MGAQ8IWI9 3026 aa8.41□□□□□ -1.06
CHD4-211ENST00000544484 KRTAP1-1Q07627 177 aa8.4□□□□□ -1.06
CHD4-211ENST00000544484 IGLV8-61A0A075B6I0 122 aa8.4□□□□□ -1.06
CHD4-211ENST00000544484 CASC10Q5T4H9 136 aa8.4□□□□□ -1.06
CHD4-211ENST00000544484 IGFL1Q6UW32 110 aa8.4□□□□□ -1.06
CHD4-211ENST00000544484 A8MWP4 228 aa8.39□□□□□ -1.07
CHD4-211ENST00000544484 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
CHD4-211ENST00000544484 C4orf26Q17RF5 130 aa8.38□□□□□ -1.07
CHD4-211ENST00000544484 Q8N377 158 aa8.38□□□□□ -1.07
CHD4-211ENST00000544484 A0A0C4DFX4 3053 aa8.37□□□□□ -1.07
CHD4-211ENST00000544484 SMR3BP02814 79 aaPredicted RBP8.37□□□□□ -1.07
CHD4-211ENST00000544484 A0A087WTM6 91 aa8.37□□□□□ -1.07
CHD4-211ENST00000544484 PRUNE2Q8WUY3 3088 aa8.37□□□□□ -1.07
CHD4-211ENST00000544484 H3BPC8 53 aa8.37□□□□□ -1.07
CHD4-211ENST00000544484 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
CHD4-211ENST00000544484 WDFY4Q6ZS81 3184 aa8.35□□□□□ -1.07
CHD4-211ENST00000544484 C9orf163Q8N9P6 203 aa8.34□□□□□ -1.07
CHD4-211ENST00000544484 DSCR10P59022 87 aa8.34□□□□□ -1.07
CHD4-211ENST00000544484 ZNF861PO60384 105 aa8.34□□□□□ -1.07
CHD4-211ENST00000544484 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
CHD4-211ENST00000544484 TEP1Q99973 2627 aaKnown RBP8.33□□□□□ -1.08
CHD4-211ENST00000544484 CHD6Q8TD26 2715 aa8.32□□□□□ -1.08
CHD4-211ENST00000544484 ERC2-IT1O76042 136 aa8.31□□□□□ -1.08
CHD4-211ENST00000544484 LOC101927531A0A1B0GV80 90 aa8.31□□□□□ -1.08
CHD4-211ENST00000544484 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
CHD4-211ENST00000544484 J3QL48 77 aa8.3□□□□□ -1.08
CHD4-211ENST00000544484 TLX1NBP0CAT3 122 aa8.29□□□□□ -1.08
CHD4-211ENST00000544484 APLNQ9ULZ1 77 aa8.29□□□□□ -1.08
CHD4-211ENST00000544484 C9orf92A6NGG3 77 aa8.29□□□□□ -1.08
CHD4-211ENST00000544484 RPS28P62857 69 aaKnown RBP8.29□□□□□ -1.08
CHD4-211ENST00000544484 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
CHD4-211ENST00000544484 C8orf17Q9NRJ1 99 aa8.29□□□□□ -1.08
CHD4-211ENST00000544484 OBSCN-AS1Q96MR7 158 aa8.28□□□□□ -1.08
CHD4-211ENST00000544484 PRO0628Q9UI54 55 aa8.28□□□□□ -1.08
CHD4-211ENST00000544484 LINC00304Q8N9R0 145 aa8.28□□□□□ -1.08
CHD4-211ENST00000544484 PSORS1C2Q9UIG4 136 aa8.28□□□□□ -1.08
CHD4-211ENST00000544484 XIRP2A4UGR9 3374 aa8.28□□□□□ -1.08
CHD4-211ENST00000544484 ZNF575Q86XF7 245 aa8.27□□□□□ -1.09
CHD4-211ENST00000544484 UNC80Q8N2C7 3258 aa8.27□□□□□ -1.09
CHD4-211ENST00000544484 TEX15Q9BXT5 2789 aa8.27□□□□□ -1.09
CHD4-211ENST00000544484 TRANK1O15050 2925 aa8.26□□□□□ -1.09
CHD4-211ENST00000544484 SSBP3-AS1Q7Z2R9 100 aa8.26□□□□□ -1.09
CHD4-211ENST00000544484 PLA2G2DQ9UNK4 145 aa8.25□□□□□ -1.09
CHD4-211ENST00000544484 SETXQ7Z333 2677 aaKnown RBP8.25□□□□□ -1.09
CHD4-211ENST00000544484 A0A1B0GVX0 72 aa8.25□□□□□ -1.09
CHD4-211ENST00000544484 COA5Q86WW8 74 aa8.25□□□□□ -1.09
CHD4-211ENST00000544484 MAP1AP78559 2803 aaPredicted RBP8.24□□□□□ -1.09
CHD4-211ENST00000544484 STAB1Q9NY15 2570 aa8.24□□□□□ -1.09
CHD4-211ENST00000544484 IGLV7-43P04211 117 aa8.24□□□□□ -1.09
CHD4-211ENST00000544484 ZNF292O60281 2723 aa8.23□□□□□ -1.09
CHD4-211ENST00000544484 A8MUN3 132 aa8.22□□□□□ -1.09
CHD4-211ENST00000544484 A0A1W2PNM2 257 aa8.22□□□□□ -1.09
CHD4-211ENST00000544484 LINC01600Q96MT4 127 aa8.21□□□□□ -1.1
CHD4-211ENST00000544484 CNBPP62633 177 aaKnown RBP8.21□□□□□ -1.1
CHD4-211ENST00000544484 TRIOO75962 3097 aa8.2□□□□□ -1.1
CHD4-211ENST00000544484 SPRR4Q96PI1 79 aa8.2□□□□□ -1.1
CHD4-211ENST00000544484 CR1P17927 2039 aa8.2□□□□□ -1.1
CHD4-211ENST00000544484 DSPP15924 2871 aaKnown RBP8.18□□□□□ -1.1
CHD4-211ENST00000544484 COX6B2Q6YFQ2 88 aa8.17□□□□□ -1.1
CHD4-211ENST00000544484 TNP2Q05952 138 aa8.16□□□□□ -1.1
CHD4-211ENST00000544484 KLKP1Q107X0 134 aa8.16□□□□□ -1.1
CHD4-211ENST00000544484 FAM104AQ969W3 186 aa8.14□□□□□ -1.11
CHD4-211ENST00000544484 VPS13AQ96RL7 3174 aa8.14□□□□□ -1.11
CHD4-211ENST00000544484 COL6A5A8TX70 2615 aa8.13□□□□□ -1.11
CHD4-211ENST00000544484 H7BZZ5 65 aa8.12□□□□□ -1.11
CHD4-211ENST00000544484 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
CHD4-211ENST00000544484 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
CHD4-211ENST00000544484 UQCR11O14957 56 aa8.09□□□□□ -1.11
CHD4-211ENST00000544484 NOTCH1P46531 2555 aa8.09□□□□□ -1.11
CHD4-211ENST00000544484 IGLV5-48A0A075B6I7 105 aa8.09□□□□□ -1.11
CHD4-211ENST00000544484 IGLV5-37A0A075B6J1 123 aa8.09□□□□□ -1.11
CHD4-211ENST00000544484 GCN1Q92616 2671 aaKnown RBP8.09□□□□□ -1.11
CHD4-211ENST00000544484 CDH23Q9H251 3354 aa8.09□□□□□ -1.12
CHD4-211ENST00000544484 CELSR3Q9NYQ7 3312 aa8.07□□□□□ -1.12
CHD4-211ENST00000544484 Q8N1X5 172 aa8.07□□□□□ -1.12
CHD4-211ENST00000544484 UNC79Q9P2D8 2635 aa8.06□□□□□ -1.12
CHD4-211ENST00000544484 NBEAL1Q6ZS30 2694 aa8.06□□□□□ -1.12
CHD4-211ENST00000544484 CYP4F30PQ9H0H9 118 aa8.05□□□□□ -1.12
CHD4-211ENST00000544484 FRYQ5TBA9 3013 aa8.04□□□□□ -1.12
CHD4-211ENST00000544484 FREM2Q5SZK8 3169 aa8.03□□□□□ -1.12
CHD4-211ENST00000544484 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 200.3 ms