RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 BOD1L2Q8IYS8 172 aa8.4□□□□□ -1.06
CD4-212ENST00000544344 CHCHD1Q96BP2 118 aaKnown RBP8.4□□□□□ -1.06
CD4-212ENST00000544344 Q9BRP9 147 aa8.39□□□□□ -1.07
CD4-212ENST00000544344 SMIM13P0DJ93 91 aa8.38□□□□□ -1.07
CD4-212ENST00000544344 TMEM170BQ5T4T1 132 aa8.38□□□□□ -1.07
CD4-212ENST00000544344 URB1-AS1Q96HZ7 61 aa8.38□□□□□ -1.07
CD4-212ENST00000544344 PCP4L1A6NKN8 68 aa8.36□□□□□ -1.07
CD4-212ENST00000544344 TSTD3H0UI37 97 aa8.36□□□□□ -1.07
CD4-212ENST00000544344 FLGP20930 4061 aaPredicted RBP8.35□□□□□ -1.07
CD4-212ENST00000544344 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
CD4-212ENST00000544344 HSBP1O75506 76 aa8.35□□□□□ -1.07
CD4-212ENST00000544344 MIR7-3HGQ8N6C7 128 aa8.35□□□□□ -1.07
CD4-212ENST00000544344 TMEM223A0PJW6 202 aa8.33□□□□□ -1.08
CD4-212ENST00000544344 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.33□□□□□ -1.08
CD4-212ENST00000544344 SCGB1D1O95968 90 aa8.33□□□□□ -1.08
CD4-212ENST00000544344 LINC00614P0C842 121 aa8.33□□□□□ -1.08
CD4-212ENST00000544344 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
CD4-212ENST00000544344 Q6ZRX8 168 aa8.33□□□□□ -1.08
CD4-212ENST00000544344 C9orf92A6NGG3 77 aa8.32□□□□□ -1.08
CD4-212ENST00000544344 HBDP02042 147 aa8.32□□□□□ -1.08
CD4-212ENST00000544344 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
CD4-212ENST00000544344 M0R2T5 61 aa8.31□□□□□ -1.08
CD4-212ENST00000544344 C9orf153Q5TBE3 101 aa8.31□□□□□ -1.08
CD4-212ENST00000544344 DDTP30046 118 aa8.3□□□□□ -1.08
CD4-212ENST00000544344 MEIG1Q5JSS6 88 aa8.3□□□□□ -1.08
CD4-212ENST00000544344 C20orf202A1L168 122 aa8.29□□□□□ -1.08
CD4-212ENST00000544344 C3orf79P0CE67 100 aa8.29□□□□□ -1.08
CD4-212ENST00000544344 CHTOPQ9Y3Y2 248 aaKnown RBP8.29□□□□□ -1.08
CD4-212ENST00000544344 HSPB8Q9UJY1 196 aa8.28□□□□□ -1.08
CD4-212ENST00000544344 LOC107984156A0A0G2JMH3 177 aa8.27□□□□□ -1.09
CD4-212ENST00000544344 KRTDAPP60985 99 aa8.27□□□□□ -1.09
CD4-212ENST00000544344 HERV-K104P63124 156 aa8.27□□□□□ -1.09
CD4-212ENST00000544344 PET117Q6UWS5 81 aa8.27□□□□□ -1.09
CD4-212ENST00000544344 ARL17AQ8IVW1 177 aa8.27□□□□□ -1.09
CD4-212ENST00000544344 ST20-AS1Q8NBB2 130 aa8.27□□□□□ -1.09
CD4-212ENST00000544344 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
CD4-212ENST00000544344 LEPROTL1O95214 131 aa8.26□□□□□ -1.09
CD4-212ENST00000544344 VAMP8Q9BV40 100 aa8.26□□□□□ -1.09
CD4-212ENST00000544344 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
CD4-212ENST00000544344 LIMD2Q9BT23 127 aa8.24□□□□□ -1.09
CD4-212ENST00000544344 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
CD4-212ENST00000544344 TRAV12-1A0A0B4J245 112 aa8.23□□□□□ -1.09
CD4-212ENST00000544344 SYS1-DBNDD2H3BUS1 97 aa8.23□□□□□ -1.09
CD4-212ENST00000544344 HRCT1Q6UXD1 115 aa8.23□□□□□ -1.09
CD4-212ENST00000544344 MIEN1Q9BRT3 115 aa8.23□□□□□ -1.09
CD4-212ENST00000544344 PRO1933Q9H354 126 aa8.23□□□□□ -1.09
CD4-212ENST00000544344 C14orf144Q96I85 54 aa8.22□□□□□ -1.09
CD4-212ENST00000544344 SSPOA2VEC9 5147 aa8.22□□□□□ -1.09
CD4-212ENST00000544344 TSPEAR-AS2P59090 65 aa8.21□□□□□ -1.1
CD4-212ENST00000544344 LINC01545Q5VT33 79 aa8.21□□□□□ -1.1
CD4-212ENST00000544344 COX6B2Q6YFQ2 88 aa8.21□□□□□ -1.1
CD4-212ENST00000544344 SPANXB1Q9NS25 103 aaPredicted RBP8.21□□□□□ -1.1
CD4-212ENST00000544344 MYMXA0A1B0GTQ4 84 aa8.2□□□□□ -1.1
CD4-212ENST00000544344 SPRR1BP22528 89 aa8.2□□□□□ -1.1
CD4-212ENST00000544344 TRAV23DV6A0A075B6W5 121 aa8.19□□□□□ -1.1
CD4-212ENST00000544344 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
CD4-212ENST00000544344 SPATA45Q537H7 98 aa8.19□□□□□ -1.1
CD4-212ENST00000544344 UQCR10Q9UDW1 63 aa8.19□□□□□ -1.1
CD4-212ENST00000544344 USH2AO75445 5202 aa8.19□□□□□ -1.1
CD4-212ENST00000544344 ZNF73O43830 326 aaPredicted RBP8.18□□□□□ -1.1
CD4-212ENST00000544344 IFI27L1Q96BM0 104 aa8.18□□□□□ -1.1
CD4-212ENST00000544344 PAM16Q9Y3D7 125 aa8.18□□□□□ -1.1
CD4-212ENST00000544344 NDUFC2O95298 119 aa8.17□□□□□ -1.1
CD4-212ENST00000544344 S100A7L2Q5SY68 101 aa8.17□□□□□ -1.1
CD4-212ENST00000544344 M0R143 59 aa8.16□□□□□ -1.1
CD4-212ENST00000544344 EIF4EBP3O60516 100 aaPredicted RBP8.16□□□□□ -1.1
CD4-212ENST00000544344 HSBP1L1C9JCN9 74 aa8.15□□□□□ -1.1
CD4-212ENST00000544344 CD164Q04900 197 aa8.14□□□□□ -1.11
CD4-212ENST00000544344 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
CD4-212ENST00000544344 PMCHL2Q9BQD1 86 aa8.14□□□□□ -1.11
CD4-212ENST00000544344 C1orf195Q5TG92 126 aa8.13□□□□□ -1.11
CD4-212ENST00000544344 LEPROTO15243 131 aa8.12□□□□□ -1.11
CD4-212ENST00000544344 Q5XG85 94 aa8.12□□□□□ -1.11
CD4-212ENST00000544344 H7C2G1 150 aa8.11□□□□□ -1.11
CD4-212ENST00000544344 SLC25A34Q6PIV7 304 aa8.11□□□□□ -1.11
CD4-212ENST00000544344 SNHG12Q9BXW3 62 aa8.1□□□□□ -1.11
CD4-212ENST00000544344 LAMTOR3Q9UHA4 124 aa8.1□□□□□ -1.11
CD4-212ENST00000544344 J3QQQ9 107 aa8.09□□□□□ -1.11
CD4-212ENST00000544344 DLEU1O43261 78 aa8.09□□□□□ -1.11
CD4-212ENST00000544344 ATOH7Q8N100 152 aa8.09□□□□□ -1.11
CD4-212ENST00000544344 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
CD4-212ENST00000544344 COX8AP10176 69 aa8.08□□□□□ -1.12
CD4-212ENST00000544344 ADAMTSL4-AS1Q5T5F5 129 aa8.08□□□□□ -1.12
CD4-212ENST00000544344 FCGBPQ9Y6R7 5405 aaPredicted RBP8.08□□□□□ -1.12
CD4-212ENST00000544344 NPC2P61916 151 aa8.07□□□□□ -1.12
CD4-212ENST00000544344 Q1RN00 199 aa8.07□□□□□ -1.12
CD4-212ENST00000544344 DHRS4-AS1Q9P1J3 65 aa8.07□□□□□ -1.12
CD4-212ENST00000544344 DPM2O94777 84 aa8.06□□□□□ -1.12
CD4-212ENST00000544344 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
CD4-212ENST00000544344 A0A0G2JQZ4 141 aa8.05□□□□□ -1.12
CD4-212ENST00000544344 PLNP26678 52 aa8.05□□□□□ -1.12
CD4-212ENST00000544344 NMUP48645 174 aa8.05□□□□□ -1.12
CD4-212ENST00000544344 COL5A1-AS1Q5SY13 56 aa8.05□□□□□ -1.12
CD4-212ENST00000544344 SMIM29Q86T20 159 aa8.05□□□□□ -1.12
CD4-212ENST00000544344 H0Y8G0 127 aa8.04□□□□□ -1.12
CD4-212ENST00000544344 IGKCP01834 107 aa8.04□□□□□ -1.12
CD4-212ENST00000544344 CFC1P0CG37 223 aa8.03□□□□□ -1.12
CD4-212ENST00000544344 A0A0J9YXY3 114 aa8.02□□□□□ -1.13
CD4-212ENST00000544344 LGALS3P17931 250 aaKnown RBP8.02□□□□□ -1.13
CD4-212ENST00000544344 ELOF1P60002 83 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms