RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 HECTD1Q9ULT8 2610 aa6.94□□□□□ -1.3
PCDH9-204ENST00000544246 DOPEY1Q5JWR5 2465 aa6.93□□□□□ -1.3
PCDH9-204ENST00000544246 AGRNO00468 2067 aa6.93□□□□□ -1.3
PCDH9-204ENST00000544246 KCNQ1DNQ9H478 68 aa6.93□□□□□ -1.3
PCDH9-204ENST00000544246 FAM104AQ969W3 186 aa6.92□□□□□ -1.3
PCDH9-204ENST00000544246 DNAH10OSP0CZ25 163 aa6.92□□□□□ -1.3
PCDH9-204ENST00000544246 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
PCDH9-204ENST00000544246 Q8NAQ8 132 aa6.92□□□□□ -1.3
PCDH9-204ENST00000544246 KLKP1Q107X0 134 aa6.91□□□□□ -1.3
PCDH9-204ENST00000544246 IGLV5-48A0A075B6I7 105 aa6.91□□□□□ -1.3
PCDH9-204ENST00000544246 LITAFQ99732 161 aa6.9□□□□□ -1.3
PCDH9-204ENST00000544246 CPAMD8Q8IZJ3 1885 aa6.9□□□□□ -1.3
PCDH9-204ENST00000544246 MTORP42345 2549 aa6.9□□□□□ -1.3
PCDH9-204ENST00000544246 LINC00336Q6ZUF6 198 aa6.9□□□□□ -1.3
PCDH9-204ENST00000544246 HTTP42858 3142 aa6.9□□□□□ -1.3
PCDH9-204ENST00000544246 PLXNB1O43157 2135 aa6.9□□□□□ -1.31
PCDH9-204ENST00000544246 USP9XQ93008 2570 aaPredicted RBP6.9□□□□□ -1.31
PCDH9-204ENST00000544246 ZNF575Q86XF7 245 aa6.89□□□□□ -1.31
PCDH9-204ENST00000544246 RANBP2P49792 3224 aaKnown RBP6.89□□□□□ -1.31
PCDH9-204ENST00000544246 ANKRD17O75179 2603 aaKnown RBP6.88□□□□□ -1.31
PCDH9-204ENST00000544246 ZNF861PO60384 105 aa6.88□□□□□ -1.31
PCDH9-204ENST00000544246 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
PCDH9-204ENST00000544246 MKI67P46013 3256 aaKnown RBP6.88□□□□□ -1.31
PCDH9-204ENST00000544246 FN1P02751 2386 aaKnown RBP6.88□□□□□ -1.31
PCDH9-204ENST00000544246 CSNK1G2-AS1Q8NCQ2 148 aa6.87□□□□□ -1.31
PCDH9-204ENST00000544246 USP9YO00507 2555 aaPredicted RBP6.87□□□□□ -1.31
PCDH9-204ENST00000544246 Q1T7F1 81 aa6.87□□□□□ -1.31
PCDH9-204ENST00000544246 MYO9AB2RTY4 2548 aa6.86□□□□□ -1.31
PCDH9-204ENST00000544246 Q8N1X5 172 aa6.86□□□□□ -1.31
PCDH9-204ENST00000544246 CHD7Q9P2D1 2997 aa6.85□□□□□ -1.31
PCDH9-204ENST00000544246 HELZ2Q9BYK8 2649 aaKnown RBP6.85□□□□□ -1.31
PCDH9-204ENST00000544246 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
PCDH9-204ENST00000544246 ACANP16112 2415 aa6.85□□□□□ -1.31
PCDH9-204ENST00000544246 H7BZZ5 65 aa6.84□□□□□ -1.31
PCDH9-204ENST00000544246 Q8N377 158 aa6.83□□□□□ -1.32
PCDH9-204ENST00000544246 C15orf56Q8N910 161 aa6.83□□□□□ -1.32
PCDH9-204ENST00000544246 CAMK2N1Q7Z7J9 78 aa6.82□□□□□ -1.32
PCDH9-204ENST00000544246 MUC4Q99102 2169 aa6.82□□□□□ -1.32
PCDH9-204ENST00000544246 TET2Q6N021 2002 aaPredicted RBP6.81□□□□□ -1.32
PCDH9-204ENST00000544246 LAMA3Q16787 3333 aa6.8□□□□□ -1.32
PCDH9-204ENST00000544246 A0A0G2JQZ4 141 aa6.8□□□□□ -1.32
PCDH9-204ENST00000544246 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
PCDH9-204ENST00000544246 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
PCDH9-204ENST00000544246 IGLV7-43P04211 117 aa6.79□□□□□ -1.32
PCDH9-204ENST00000544246 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
PCDH9-204ENST00000544246 BAHCC1Q9P281 2608 aa6.79□□□□□ -1.32
PCDH9-204ENST00000544246 C5orf42Q9H799 3197 aa6.78□□□□□ -1.32
PCDH9-204ENST00000544246 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
PCDH9-204ENST00000544246 ANAPC11Q9NYG5 84 aa6.78□□□□□ -1.32
PCDH9-204ENST00000544246 A0A087WTM6 91 aa6.76□□□□□ -1.33
PCDH9-204ENST00000544246 TLX1NBP0CAT3 122 aa6.76□□□□□ -1.33
PCDH9-204ENST00000544246 C9orf163Q8N9P6 203 aa6.76□□□□□ -1.33
PCDH9-204ENST00000544246 CHD9Q3L8U1 2897 aa6.76□□□□□ -1.33
PCDH9-204ENST00000544246 SPRR4Q96PI1 79 aa6.75□□□□□ -1.33
PCDH9-204ENST00000544246 A0A0C4DFX4 3053 aa6.75□□□□□ -1.33
PCDH9-204ENST00000544246 Q6ZSA8 131 aa6.75□□□□□ -1.33
PCDH9-204ENST00000544246 PCSK5Q92824 1860 aa6.74□□□□□ -1.33
PCDH9-204ENST00000544246 A0A1B0GU33 70 aa6.74□□□□□ -1.33
PCDH9-204ENST00000544246 PRR26Q8N8Z3 221 aa6.73□□□□□ -1.33
PCDH9-204ENST00000544246 PRR34Q9NV39 138 aa6.73□□□□□ -1.33
PCDH9-204ENST00000544246 SETD2Q9BYW2 2564 aaPredicted RBP6.72□□□□□ -1.33
PCDH9-204ENST00000544246 PSORS1C2Q9UIG4 136 aa6.72□□□□□ -1.33
PCDH9-204ENST00000544246 PRUNE2Q8WUY3 3088 aa6.71□□□□□ -1.34
PCDH9-204ENST00000544246 USP24Q9UPU5 2620 aa6.71□□□□□ -1.34
PCDH9-204ENST00000544246 BRCA2P51587 3418 aa6.7□□□□□ -1.34
PCDH9-204ENST00000544246 M0R2T5 61 aa6.7□□□□□ -1.34
PCDH9-204ENST00000544246 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
PCDH9-204ENST00000544246 WIPF1O43516 503 aa6.69□□□□□ -1.34
PCDH9-204ENST00000544246 HRES1P13985 223 aa6.69□□□□□ -1.34
PCDH9-204ENST00000544246 KRTAP10-11P60412 298 aa6.69□□□□□ -1.34
PCDH9-204ENST00000544246 EIF4EBP3O60516 100 aaPredicted RBP6.68□□□□□ -1.34
PCDH9-204ENST00000544246 CFAP46Q8IYW2 2715 aa6.68□□□□□ -1.34
PCDH9-204ENST00000544246 H3BS24 57 aa6.68□□□□□ -1.34
PCDH9-204ENST00000544246 K7EIL1 84 aa6.68□□□□□ -1.34
PCDH9-204ENST00000544246 Q75L30 129 aa6.67□□□□□ -1.34
PCDH9-204ENST00000544246 TRANK1O15050 2925 aa6.66□□□□□ -1.34
PCDH9-204ENST00000544246 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
PCDH9-204ENST00000544246 C19orf73Q9NVV2 129 aa6.66□□□□□ -1.34
PCDH9-204ENST00000544246 KLK9Q2XQG4 91 aa6.65□□□□□ -1.34
PCDH9-204ENST00000544246 ZNF292O60281 2723 aa6.65□□□□□ -1.34
PCDH9-204ENST00000544246 COL27A1Q8IZC6 1860 aaPredicted RBP6.65□□□□□ -1.34
PCDH9-204ENST00000544246 KRTAP1-3Q8IUG1 177 aa6.65□□□□□ -1.34
PCDH9-204ENST00000544246 CNBPP62633 177 aaKnown RBP6.64□□□□□ -1.35
PCDH9-204ENST00000544246 IGLV7-46A0A075B6I9 117 aa6.64□□□□□ -1.35
PCDH9-204ENST00000544246 S4R3F8 94 aa6.64□□□□□ -1.35
PCDH9-204ENST00000544246 TNRC18O15417 2968 aaPredicted RBP6.63□□□□□ -1.35
PCDH9-204ENST00000544246 LINC00612Q8N6U2 182 aa6.62□□□□□ -1.35
PCDH9-204ENST00000544246 A0A096LNT2 108 aa6.62□□□□□ -1.35
PCDH9-204ENST00000544246 SPINK7P58062 85 aa6.61□□□□□ -1.35
PCDH9-204ENST00000544246 OCR1Q9BZK8 76 aa6.61□□□□□ -1.35
PCDH9-204ENST00000544246 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
PCDH9-204ENST00000544246 GIG44P09565 113 aaPredicted RBP6.59□□□□□ -1.35
PCDH9-204ENST00000544246 KRTAP1-1Q07627 177 aa6.58□□□□□ -1.36
PCDH9-204ENST00000544246 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
PCDH9-204ENST00000544246 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
PCDH9-204ENST00000544246 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
PCDH9-204ENST00000544246 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
PCDH9-204ENST00000544246 ITPR3Q14573 2671 aa6.55□□□□□ -1.36
PCDH9-204ENST00000544246 PRRC2CQ9Y520 2896 aaKnown RBP6.54□□□□□ -1.36
PCDH9-204ENST00000544246 R4GN34 69 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms