RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 LINC00308Q8TCZ7 52 aa13.54□□□□□ -0.24
CHFR-222ENST00000544093 JOSD1Q15040 202 aaPredicted RBP13.53□□□□□ -0.24
CHFR-222ENST00000544093 EIF4EBP3O60516 100 aaPredicted RBP13.52□□□□□ -0.25
CHFR-222ENST00000544093 SPAG11AQ6PDA7 123 aa13.52□□□□□ -0.25
CHFR-222ENST00000544093 C3orf22Q8N5N4 141 aa13.51□□□□□ -0.25
CHFR-222ENST00000544093 LPAP08519 4548 aa13.51□□□□□ -0.25
CHFR-222ENST00000544093 ZNF73O43830 326 aaPredicted RBP13.5□□□□□ -0.25
CHFR-222ENST00000544093 LINC00483Q53H64 154 aa13.5□□□□□ -0.25
CHFR-222ENST00000544093 HINT1P49773 126 aaPredicted RBP13.49□□□□□ -0.25
CHFR-222ENST00000544093 COPS9Q8WXC6 57 aa13.49□□□□□ -0.25
CHFR-222ENST00000544093 SCGB1D4Q6XE38 83 aa13.48□□□□□ -0.25
CHFR-222ENST00000544093 SNRPEP62304 92 aaKnown RBP13.47□□□□□ -0.25
CHFR-222ENST00000544093 LINC00518Q8N0U6 118 aa13.47□□□□□ -0.25
CHFR-222ENST00000544093 Q9BRP9 147 aa13.47□□□□□ -0.25
CHFR-222ENST00000544093 TTTY13Q9BZ97 58 aa13.47□□□□□ -0.25
CHFR-222ENST00000544093 C4orf48Q5BLP8 95 aa13.46□□□□□ -0.25
CHFR-222ENST00000544093 SPANXDQ9BXN6 97 aa13.46□□□□□ -0.25
CHFR-222ENST00000544093 GAGE2AQ6NT46 116 aa13.45□□□□□ -0.26
CHFR-222ENST00000544093 OR13C6PQ8NH95 151 aa13.45□□□□□ -0.26
CHFR-222ENST00000544093 PPDPFQ9H3Y8 114 aa13.45□□□□□ -0.26
CHFR-222ENST00000544093 RNF213Q63HN8 5207 aa13.44□□□□□ -0.26
CHFR-222ENST00000544093 S100A2P29034 98 aa13.44□□□□□ -0.26
CHFR-222ENST00000544093 C5orf52A6NGY3 159 aa13.43□□□□□ -0.26
CHFR-222ENST00000544093 ERC2-IT1O76042 136 aa13.43□□□□□ -0.26
CHFR-222ENST00000544093 ANKRD39Q53RE8 183 aa13.43□□□□□ -0.26
CHFR-222ENST00000544093 Q6ZVH6 145 aa13.43□□□□□ -0.26
CHFR-222ENST00000544093 ATOH7Q8N100 152 aa13.42□□□□□ -0.26
CHFR-222ENST00000544093 IFITM1P13164 125 aa13.41□□□□□ -0.26
CHFR-222ENST00000544093 HIST3H2BBQ8N257 126 aa13.4□□□□□ -0.26
CHFR-222ENST00000544093 Q8NBF4 154 aa13.4□□□□□ -0.26
CHFR-222ENST00000544093 S100A6P06703 90 aa13.39□□□□□ -0.27
CHFR-222ENST00000544093 HIST1H2BLQ99880 126 aa13.38□□□□□ -0.27
CHFR-222ENST00000544093 RETNLBQ9BQ08 111 aa13.38□□□□□ -0.27
CHFR-222ENST00000544093 SPINK1P00995 79 aa13.37□□□□□ -0.27
CHFR-222ENST00000544093 SSBP3-AS1Q7Z2R9 100 aa13.37□□□□□ -0.27
CHFR-222ENST00000544093 DHRS4-AS1Q9P1J3 65 aa13.37□□□□□ -0.27
CHFR-222ENST00000544093 PCP2Q8IVA1 136 aa13.35□□□□□ -0.27
CHFR-222ENST00000544093 IGLV9-49A0A0B4J1Y8 123 aa13.34□□□□□ -0.27
CHFR-222ENST00000544093 HSBP1L1C9JCN9 74 aa13.34□□□□□ -0.27
CHFR-222ENST00000544093 MOBPQ13875 183 aa13.34□□□□□ -0.27
CHFR-222ENST00000544093 IGLV7-46A0A075B6I9 117 aa13.32□□□□□ -0.28
CHFR-222ENST00000544093 TPRXLQ17RH7 258 aa13.32□□□□□ -0.28
CHFR-222ENST00000544093 ELOF1P60002 83 aaKnown RBP13.31□□□□□ -0.28
CHFR-222ENST00000544093 SLC25A34Q6PIV7 304 aa13.31□□□□□ -0.28
CHFR-222ENST00000544093 FP248Q71RG6 208 aaPredicted RBP13.31□□□□□ -0.28
CHFR-222ENST00000544093 TRBV7-6A0A0J9YX20 115 aa13.3□□□□□ -0.28
CHFR-222ENST00000544093 COX7BP24311 80 aa13.3□□□□□ -0.28
CHFR-222ENST00000544093 RPS29P62273 56 aaKnown RBP13.3□□□□□ -0.28
CHFR-222ENST00000544093 C6orf99Q4VX62 202 aa13.3□□□□□ -0.28
CHFR-222ENST00000544093 MUSTN1Q8IVN3 82 aa13.28□□□□□ -0.28
CHFR-222ENST00000544093 ST20-AS1Q8NBB2 130 aa13.28□□□□□ -0.28
CHFR-222ENST00000544093 A6NDN8 102 aa13.27□□□□□ -0.29
CHFR-222ENST00000544093 C9orf153Q5TBE3 101 aa13.27□□□□□ -0.29
CHFR-222ENST00000544093 SPRR1BP22528 89 aa13.26□□□□□ -0.29
CHFR-222ENST00000544093 TRAV13-2A0A0B4J235 113 aa13.25□□□□□ -0.29
CHFR-222ENST00000544093 CDIP1Q9H305 208 aa13.25□□□□□ -0.29
CHFR-222ENST00000544093 A0A1B0GWB2 263 aa13.24□□□□□ -0.29
CHFR-222ENST00000544093 A4D1N5 150 aa13.21□□□□□ -0.29
CHFR-222ENST00000544093 LAMTOR3Q9UHA4 124 aa13.21□□□□□ -0.29
CHFR-222ENST00000544093 SLC25A20O43772 301 aa13.19□□□□□ -0.3
CHFR-222ENST00000544093 SCGB1D1O95968 90 aa13.19□□□□□ -0.3
CHFR-222ENST00000544093 TAL2Q16559 108 aa13.17□□□□□ -0.3
CHFR-222ENST00000544093 Q8N377 158 aa13.17□□□□□ -0.3
CHFR-222ENST00000544093 NHP2Q9NX24 153 aaKnown RBP13.17□□□□□ -0.3
CHFR-222ENST00000544093 TEX49A0A1B0GTD5 131 aa13.16□□□□□ -0.3
CHFR-222ENST00000544093 SMIM11BQ8TCY0 68 aa13.13□□□□□ -0.31
CHFR-222ENST00000544093 DEFB105AQ8NG35 78 aa13.12□□□□□ -0.31
CHFR-222ENST00000544093 A0A0U1RQV1 116 aa13.11□□□□□ -0.31
CHFR-222ENST00000544093 VAMP3Q15836 100 aa13.11□□□□□ -0.31
CHFR-222ENST00000544093 IGLV5-48A0A075B6I7 105 aa13.1□□□□□ -0.31
CHFR-222ENST00000544093 COX8AP10176 69 aa13.09□□□□□ -0.31
CHFR-222ENST00000544093 KRTAP13-3Q3SY46 172 aa13.09□□□□□ -0.31
CHFR-222ENST00000544093 LIMD2Q9BT23 127 aa13.09□□□□□ -0.31
CHFR-222ENST00000544093 MUC2Q02817 5179 aa13.09□□□□□ -0.31
CHFR-222ENST00000544093 DLEU1O43261 78 aa13.08□□□□□ -0.32
CHFR-222ENST00000544093 Q1RN00 199 aa13.07□□□□□ -0.32
CHFR-222ENST00000544093 PRO1933Q9H354 126 aa13.07□□□□□ -0.32
CHFR-222ENST00000544093 HIST1H4GQ99525 98 aa13.06□□□□□ -0.32
CHFR-222ENST00000544093 CD164Q04900 197 aa13.05□□□□□ -0.32
CHFR-222ENST00000544093 LINC01547P58512 204 aaPredicted RBP13.03□□□□□ -0.32
CHFR-222ENST00000544093 SMIM29Q86T20 159 aa13.02□□□□□ -0.33
CHFR-222ENST00000544093 H7C2G1 150 aa12.99□□□□□ -0.33
CHFR-222ENST00000544093 HRCT1Q6UXD1 115 aa12.99□□□□□ -0.33
CHFR-222ENST00000544093 LINC00575Q6W349 94 aa12.99□□□□□ -0.33
CHFR-222ENST00000544093 hADV29S1A0JD25 119 aa12.97□□□□□ -0.33
CHFR-222ENST00000544093 BVES-AS1Q5T3Y7 98 aa12.97□□□□□ -0.33
CHFR-222ENST00000544093 VAMP8Q9BV40 100 aa12.97□□□□□ -0.33
CHFR-222ENST00000544093 HIGD1BQ9P298 99 aa12.97□□□□□ -0.33
CHFR-222ENST00000544093 PAM16Q9Y3D7 125 aa12.97□□□□□ -0.33
CHFR-222ENST00000544093 SPATA45Q537H7 98 aa12.96□□□□□ -0.33
CHFR-222ENST00000544093 C14orf144Q96I85 54 aa12.95□□□□□ -0.34
CHFR-222ENST00000544093 F8WEM9 126 aa12.94□□□□□ -0.34
CHFR-222ENST00000544093 Q5XG85 94 aa12.94□□□□□ -0.34
CHFR-222ENST00000544093 C12orf57Q99622 126 aa12.94□□□□□ -0.34
CHFR-222ENST00000544093 MUC17Q685J3 4493 aa12.94□□□□□ -0.34
CHFR-222ENST00000544093 SEC61BP60468 96 aaKnown RBP12.92□□□□□ -0.34
CHFR-222ENST00000544093 ASB16-AS1Q495Z4 193 aa12.92□□□□□ -0.34
CHFR-222ENST00000544093 Q6ZQY7 126 aa12.92□□□□□ -0.34
CHFR-222ENST00000544093 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.89□□□□□ -0.35
CHFR-222ENST00000544093 RAB37Q96AX2 223 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms