RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 TLX1NBP0CAT3 122 aa4.31□□□□□ -1.72
PTPRO-208ENST00000542557 SYCNQ0VAF6 134 aa4.31□□□□□ -1.72
PTPRO-208ENST00000542557 LAMTOR3Q9UHA4 124 aa4.31□□□□□ -1.72
PTPRO-208ENST00000542557 HUWE1Q7Z6Z7 4374 aaKnown RBP4.31□□□□□ -1.72
PTPRO-208ENST00000542557 FBN1P35555 2871 aaKnown RBP4.31□□□□□ -1.72
PTPRO-208ENST00000542557 PKD1L1Q8TDX9 2849 aa4.3□□□□□ -1.72
PTPRO-208ENST00000542557 MAST4O15021 2626 aa4.3□□□□□ -1.72
PTPRO-208ENST00000542557 Q6ZRP5 223 aa4.3□□□□□ -1.72
PTPRO-208ENST00000542557 C3orf22Q8N5N4 141 aa4.3□□□□□ -1.72
PTPRO-208ENST00000542557 TM2D3Q9BRN9 247 aa4.3□□□□□ -1.72
PTPRO-208ENST00000542557 UBL5Q9BZL1 73 aa4.3□□□□□ -1.72
PTPRO-208ENST00000542557 STAB1Q9NY15 2570 aa4.3□□□□□ -1.72
PTPRO-208ENST00000542557 DSCR8Q96T75 97 aa4.29□□□□□ -1.72
PTPRO-208ENST00000542557 PLA2G2DQ9UNK4 145 aa4.29□□□□□ -1.72
PTPRO-208ENST00000542557 COX7CP15954 63 aa4.29□□□□□ -1.72
PTPRO-208ENST00000542557 TRBV7-4A0A0J9YYF1 115 aa4.28□□□□□ -1.72
PTPRO-208ENST00000542557 LINC00588Q9Y4M8 146 aa4.28□□□□□ -1.72
PTPRO-208ENST00000542557 RMI2Q96E14 147 aa4.28□□□□□ -1.72
PTPRO-208ENST00000542557 KCNQ1DNQ9H478 68 aa4.28□□□□□ -1.72
PTPRO-208ENST00000542557 BAHCC1Q9P281 2608 aa4.28□□□□□ -1.72
PTPRO-208ENST00000542557 UPK3BQ9BT76 320 aa4.28□□□□□ -1.72
PTPRO-208ENST00000542557 IGLV5-37A0A075B6J1 123 aa4.27□□□□□ -1.73
PTPRO-208ENST00000542557 A0A087WVE0 104 aa4.27□□□□□ -1.73
PTPRO-208ENST00000542557 J3KT08 172 aa4.27□□□□□ -1.73
PTPRO-208ENST00000542557 C9orf153Q5TBE3 101 aa4.27□□□□□ -1.73
PTPRO-208ENST00000542557 NKAPP1Q8N9T2 125 aa4.27□□□□□ -1.73
PTPRO-208ENST00000542557 K7EIL1 84 aa4.26□□□□□ -1.73
PTPRO-208ENST00000542557 CRYGAP11844 174 aa4.26□□□□□ -1.73
PTPRO-208ENST00000542557 M0R2N4 97 aa4.26□□□□□ -1.73
PTPRO-208ENST00000542557 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
PTPRO-208ENST00000542557 C7orf33Q8WU49 177 aa4.26□□□□□ -1.73
PTPRO-208ENST00000542557 A0A0U1RQV1 116 aa4.25□□□□□ -1.73
PTPRO-208ENST00000542557 Q6ZVQ6 151 aa4.25□□□□□ -1.73
PTPRO-208ENST00000542557 FLNBO75369 2602 aaKnown RBP4.25□□□□□ -1.73
PTPRO-208ENST00000542557 CXCL6P80162 114 aa4.25□□□□□ -1.73
PTPRO-208ENST00000542557 LINC01547P58512 204 aaPredicted RBP4.25□□□□□ -1.73
PTPRO-208ENST00000542557 BCE1O60756 84 aa4.24□□□□□ -1.73
PTPRO-208ENST00000542557 SPRR1AP35321 89 aa4.24□□□□□ -1.73
PTPRO-208ENST00000542557 CASC10Q5T4H9 136 aa4.24□□□□□ -1.73
PTPRO-208ENST00000542557 NOTCH1P46531 2555 aa4.24□□□□□ -1.73
PTPRO-208ENST00000542557 KRTAP4-16G5E9R7 235 aaPredicted RBP4.23□□□□□ -1.73
PTPRO-208ENST00000542557 PRB2P02812 416 aaPredicted RBP4.23□□□□□ -1.73
PTPRO-208ENST00000542557 DHRS4-AS1Q9P1J3 65 aa4.23□□□□□ -1.73
PTPRO-208ENST00000542557 IGLV1-50A0A075B6I6 118 aa4.23□□□□□ -1.73
PTPRO-208ENST00000542557 Q6ZRX8 168 aa4.23□□□□□ -1.73
PTPRO-208ENST00000542557 DNAH9Q9NYC9 4486 aa4.23□□□□□ -1.73
PTPRO-208ENST00000542557 LOC107984640A0A0U1RRK4 108 aa4.22□□□□□ -1.73
PTPRO-208ENST00000542557 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
PTPRO-208ENST00000542557 NBEAL1Q6ZS30 2694 aa4.22□□□□□ -1.73
PTPRO-208ENST00000542557 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
PTPRO-208ENST00000542557 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
PTPRO-208ENST00000542557 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
PTPRO-208ENST00000542557 HAMPP81172 84 aa4.22□□□□□ -1.73
PTPRO-208ENST00000542557 KRTAP7-1Q8IUC3 87 aa4.22□□□□□ -1.73
PTPRO-208ENST00000542557 Q8N377 158 aa4.21□□□□□ -1.74
PTPRO-208ENST00000542557 COL6A5A8TX70 2615 aa4.21□□□□□ -1.74
PTPRO-208ENST00000542557 ETDCA0A1B0GVM5 59 aa4.21□□□□□ -1.74
PTPRO-208ENST00000542557 A0A1B0GW54 56 aa4.21□□□□□ -1.74
PTPRO-208ENST00000542557 FAM168BA1KXE4 195 aa4.21□□□□□ -1.74
PTPRO-208ENST00000542557 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
PTPRO-208ENST00000542557 Q9BRP9 147 aa4.2□□□□□ -1.74
PTPRO-208ENST00000542557 PKIGQ9Y2B9 76 aa4.2□□□□□ -1.74
PTPRO-208ENST00000542557 FAM236DA0A1B0GTK5 79 aa4.19□□□□□ -1.74
PTPRO-208ENST00000542557 RPL37AP8A6NKH3 93 aa4.19□□□□□ -1.74
PTPRO-208ENST00000542557 FAM236CP0DP71 79 aa4.19□□□□□ -1.74
PTPRO-208ENST00000542557 CNBPP62633 177 aaKnown RBP4.19□□□□□ -1.74
PTPRO-208ENST00000542557 DNAH10Q8IVF4 4471 aa4.19□□□□□ -1.74
PTPRO-208ENST00000542557 TMEM258P61165 79 aa4.19□□□□□ -1.74
PTPRO-208ENST00000542557 TRAV7A0A075B6U4 112 aa4.18□□□□□ -1.74
PTPRO-208ENST00000542557 KRTAP1-5Q9BYS1 174 aa4.18□□□□□ -1.74
PTPRO-208ENST00000542557 CYSTM1Q9H1C7 97 aa4.18□□□□□ -1.74
PTPRO-208ENST00000542557 C16orf90A8MZG2 172 aa4.18□□□□□ -1.74
PTPRO-208ENST00000542557 DEFB105AQ8NG35 78 aa4.18□□□□□ -1.74
PTPRO-208ENST00000542557 LCE2CQ5TA81 110 aa4.17□□□□□ -1.74
PTPRO-208ENST00000542557 REG3GQ6UW15 175 aa4.17□□□□□ -1.74
PTPRO-208ENST00000542557 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
PTPRO-208ENST00000542557 NREPQ16612 68 aa4.17□□□□□ -1.74
PTPRO-208ENST00000542557 C14orf177Q52M58 125 aa4.17□□□□□ -1.74
PTPRO-208ENST00000542557 FUSP35637 526 aaKnown RBP eCLIP4.16□□□□□ -1.74
PTPRO-208ENST00000542557 SCXQ7RTU7 201 aa4.16□□□□□ -1.74
PTPRO-208ENST00000542557 UBE2DNLQ8IWF7 75 aa4.16□□□□□ -1.74
PTPRO-208ENST00000542557 ST20-AS1Q8NBB2 130 aa4.16□□□□□ -1.74
PTPRO-208ENST00000542557 MGAM2Q2M2H8 2515 aa4.16□□□□□ -1.74
PTPRO-208ENST00000542557 A0A096LNI7 61 aa4.15□□□□□ -1.74
PTPRO-208ENST00000542557 UBE2BP63146 152 aa4.15□□□□□ -1.74
PTPRO-208ENST00000542557 C1orf137Q5JT78 98 aa4.15□□□□□ -1.74
PTPRO-208ENST00000542557 Q8NBF4 154 aa4.15□□□□□ -1.74
PTPRO-208ENST00000542557 SPRR4Q96PI1 79 aa4.15□□□□□ -1.74
PTPRO-208ENST00000542557 B9D2Q9BPU9 175 aa4.15□□□□□ -1.74
PTPRO-208ENST00000542557 PLECQ15149 4684 aaKnown RBP4.15□□□□□ -1.74
PTPRO-208ENST00000542557 STAB2Q8WWQ8 2551 aa4.15□□□□□ -1.75
PTPRO-208ENST00000542557 A0A1W2PNM2 257 aa4.15□□□□□ -1.75
PTPRO-208ENST00000542557 PSCAO43653 123 aa4.15□□□□□ -1.75
PTPRO-208ENST00000542557 ERC2-IT1O76042 136 aa4.15□□□□□ -1.75
PTPRO-208ENST00000542557 IGKV4-1P06312 121 aa4.15□□□□□ -1.75
PTPRO-208ENST00000542557 C3orf84H3BNL1 204 aa4.15□□□□□ -1.75
PTPRO-208ENST00000542557 BPY2O14599 106 aa4.15□□□□□ -1.75
PTPRO-208ENST00000542557 KLKP1Q107X0 134 aa4.14□□□□□ -1.75
PTPRO-208ENST00000542557 C20orf197Q8N268 126 aa4.14□□□□□ -1.75
PTPRO-208ENST00000542557 A0A1W2PNN7 141 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms