RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 Q6ZRX8 168 aa9.41□□□□□ -0.9
CCND1-205ENST00000542367 TRAV23DV6A0A075B6W5 121 aa9.4□□□□□ -0.9
CCND1-205ENST00000542367 Q8NBF4 154 aa9.4□□□□□ -0.9
CCND1-205ENST00000542367 C3orf79P0CE67 100 aa9.39□□□□□ -0.91
CCND1-205ENST00000542367 LITAFQ99732 161 aa9.39□□□□□ -0.91
CCND1-205ENST00000542367 TPRXLQ17RH7 258 aa9.37□□□□□ -0.91
CCND1-205ENST00000542367 COA6Q5JTJ3 125 aaKnown RBP9.37□□□□□ -0.91
CCND1-205ENST00000542367 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
CCND1-205ENST00000542367 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
CCND1-205ENST00000542367 MUC2Q02817 5179 aa9.36□□□□□ -0.91
CCND1-205ENST00000542367 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
CCND1-205ENST00000542367 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
CCND1-205ENST00000542367 ZNF73O43830 326 aaPredicted RBP9.36□□□□□ -0.91
CCND1-205ENST00000542367 TIMM17BO60830 172 aa9.36□□□□□ -0.91
CCND1-205ENST00000542367 JOSD1Q15040 202 aaPredicted RBP9.36□□□□□ -0.91
CCND1-205ENST00000542367 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
CCND1-205ENST00000542367 KRTDAPP60985 99 aa9.35□□□□□ -0.91
CCND1-205ENST00000542367 MOBPQ13875 183 aa9.35□□□□□ -0.91
CCND1-205ENST00000542367 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
CCND1-205ENST00000542367 SPINK1P00995 79 aa9.34□□□□□ -0.91
CCND1-205ENST00000542367 OR13C6PQ8NH95 151 aa9.34□□□□□ -0.91
CCND1-205ENST00000542367 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
CCND1-205ENST00000542367 SSBP3-AS1Q7Z2R9 100 aa9.33□□□□□ -0.92
CCND1-205ENST00000542367 CBY1Q9Y3M2 126 aa9.33□□□□□ -0.92
CCND1-205ENST00000542367 FP248Q71RG6 208 aaPredicted RBP9.32□□□□□ -0.92
CCND1-205ENST00000542367 ST20-AS1Q8NBB2 130 aa9.31□□□□□ -0.92
CCND1-205ENST00000542367 MUC17Q685J3 4493 aa9.31□□□□□ -0.92
CCND1-205ENST00000542367 C20orf202A1L168 122 aa9.29□□□□□ -0.92
CCND1-205ENST00000542367 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
CCND1-205ENST00000542367 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
CCND1-205ENST00000542367 SCGB1D4Q6XE38 83 aa9.28□□□□□ -0.92
CCND1-205ENST00000542367 LINC00518Q8N0U6 118 aa9.28□□□□□ -0.92
CCND1-205ENST00000542367 C5orf52A6NGY3 159 aa9.27□□□□□ -0.93
CCND1-205ENST00000542367 C9orf153Q5TBE3 101 aa9.27□□□□□ -0.93
CCND1-205ENST00000542367 ATOH7Q8N100 152 aa9.27□□□□□ -0.93
CCND1-205ENST00000542367 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
CCND1-205ENST00000542367 RPS29P62273 56 aaKnown RBP9.26□□□□□ -0.93
CCND1-205ENST00000542367 Q8N377 158 aa9.25□□□□□ -0.93
CCND1-205ENST00000542367 DHRS4-AS1Q9P1J3 65 aa9.25□□□□□ -0.93
CCND1-205ENST00000542367 KRTAP13-3Q3SY46 172 aa9.23□□□□□ -0.93
CCND1-205ENST00000542367 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
CCND1-205ENST00000542367 SPRR1BP22528 89 aa9.22□□□□□ -0.93
CCND1-205ENST00000542367 COX7BP24311 80 aa9.22□□□□□ -0.93
CCND1-205ENST00000542367 ELOF1P60002 83 aaKnown RBP9.22□□□□□ -0.93
CCND1-205ENST00000542367 PCP2Q8IVA1 136 aa9.22□□□□□ -0.93
CCND1-205ENST00000542367 SLC25A20O43772 301 aa9.21□□□□□ -0.94
CCND1-205ENST00000542367 IFITM1P13164 125 aa9.21□□□□□ -0.94
CCND1-205ENST00000542367 AKR1D1P51857 326 aa9.21□□□□□ -0.94
CCND1-205ENST00000542367 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
CCND1-205ENST00000542367 Q6ZVH6 145 aa9.2□□□□□ -0.94
CCND1-205ENST00000542367 MUSTN1Q8IVN3 82 aa9.2□□□□□ -0.94
CCND1-205ENST00000542367 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
CCND1-205ENST00000542367 A6NDN8 102 aa9.18□□□□□ -0.94
CCND1-205ENST00000542367 LAMTOR3Q9UHA4 124 aa9.18□□□□□ -0.94
CCND1-205ENST00000542367 TRBV7-6A0A0J9YX20 115 aa9.17□□□□□ -0.94
CCND1-205ENST00000542367 SNRPEP62304 92 aaKnown RBP9.17□□□□□ -0.94
CCND1-205ENST00000542367 TAL2Q16559 108 aa9.17□□□□□ -0.94
CCND1-205ENST00000542367 HIST3H2BBQ8N257 126 aa9.17□□□□□ -0.94
CCND1-205ENST00000542367 DEFB105AQ8NG35 78 aa9.17□□□□□ -0.94
CCND1-205ENST00000542367 A0A1B0GWB2 263 aa9.15□□□□□ -0.94
CCND1-205ENST00000542367 S100A2P29034 98 aa9.15□□□□□ -0.94
CCND1-205ENST00000542367 HIST1H2BLQ99880 126 aa9.15□□□□□ -0.94
CCND1-205ENST00000542367 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
CCND1-205ENST00000542367 HRCT1Q6UXD1 115 aa9.14□□□□□ -0.95
CCND1-205ENST00000542367 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
CCND1-205ENST00000542367 Q1RN00 199 aa9.13□□□□□ -0.95
CCND1-205ENST00000542367 ASB16-AS1Q495Z4 193 aa9.13□□□□□ -0.95
CCND1-205ENST00000542367 TRAV13-2A0A0B4J235 113 aa9.11□□□□□ -0.95
CCND1-205ENST00000542367 S100A1P23297 94 aa9.11□□□□□ -0.95
CCND1-205ENST00000542367 HSBP1L1C9JCN9 74 aa9.1□□□□□ -0.95
CCND1-205ENST00000542367 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
CCND1-205ENST00000542367 SMIM11BQ8TCY0 68 aa9.1□□□□□ -0.95
CCND1-205ENST00000542367 LIMD2Q9BT23 127 aa9.1□□□□□ -0.95
CCND1-205ENST00000542367 A4D1N5 150 aa9.09□□□□□ -0.95
CCND1-205ENST00000542367 LINC01547P58512 204 aaPredicted RBP9.09□□□□□ -0.95
CCND1-205ENST00000542367 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
CCND1-205ENST00000542367 SMIM29Q86T20 159 aa9.09□□□□□ -0.95
CCND1-205ENST00000542367 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
CCND1-205ENST00000542367 S100A6P06703 90 aa9.08□□□□□ -0.96
CCND1-205ENST00000542367 IGLV5-48A0A075B6I7 105 aa9.07□□□□□ -0.96
CCND1-205ENST00000542367 CD164Q04900 197 aa9.06□□□□□ -0.96
CCND1-205ENST00000542367 NHP2Q9NX24 153 aaKnown RBP9.06□□□□□ -0.96
CCND1-205ENST00000542367 XP32Q5T750 250 aa9.05□□□□□ -0.96
CCND1-205ENST00000542367 H7C2G1 150 aa9.04□□□□□ -0.96
CCND1-205ENST00000542367 KRTAP4-1Q9BYQ7 146 aa9.04□□□□□ -0.96
CCND1-205ENST00000542367 VAMP3Q15836 100 aa9.03□□□□□ -0.96
CCND1-205ENST00000542367 A0A0G2JQZ4 141 aa9.02□□□□□ -0.97
CCND1-205ENST00000542367 SCGB1D1O95968 90 aa9.02□□□□□ -0.97
CCND1-205ENST00000542367 LINC00575Q6W349 94 aa9□□□□□ -0.97
CCND1-205ENST00000542367 C9orf92A6NGG3 77 aa8.99□□□□□ -0.97
CCND1-205ENST00000542367 Q5XG85 94 aa8.98□□□□□ -0.97
CCND1-205ENST00000542367 HIST1H4GQ99525 98 aa8.98□□□□□ -0.97
CCND1-205ENST00000542367 hADV29S1A0JD25 119 aa8.97□□□□□ -0.97
CCND1-205ENST00000542367 C12orf57Q99622 126 aa8.97□□□□□ -0.97
CCND1-205ENST00000542367 COX8AP10176 69 aa8.96□□□□□ -0.98
CCND1-205ENST00000542367 C1orf195Q5TG92 126 aa8.96□□□□□ -0.98
CCND1-205ENST00000542367 Q6ZQY7 126 aa8.95□□□□□ -0.98
CCND1-205ENST00000542367 F8WEM9 126 aa8.93□□□□□ -0.98
CCND1-205ENST00000542367 DLEU1O43261 78 aa8.92□□□□□ -0.98
CCND1-205ENST00000542367 PCOTHQ58A44 107 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms