RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 SPAG11AQ6PDA7 123 aa8.91□□□□□ -0.98
SCNN1A-217ENST00000542260 LINC00587B1AMM8 73 aa8.9□□□□□ -0.98
SCNN1A-217ENST00000542260 LINC00158P58513 81 aa8.9□□□□□ -0.98
SCNN1A-217ENST00000542260 MEIG1Q5JSS6 88 aa8.9□□□□□ -0.98
SCNN1A-217ENST00000542260 ZNF706Q9Y5V0 76 aaPredicted RBP8.9□□□□□ -0.98
SCNN1A-217ENST00000542260 MUC17Q685J3 4493 aa8.89□□□□□ -0.99
SCNN1A-217ENST00000542260 A0A0J9YXY3 114 aa8.89□□□□□ -0.99
SCNN1A-217ENST00000542260 C3orf22Q8N5N4 141 aa8.88□□□□□ -0.99
SCNN1A-217ENST00000542260 Q8NDZ9 215 aa8.88□□□□□ -0.99
SCNN1A-217ENST00000542260 TIMM17BO60830 172 aa8.87□□□□□ -0.99
SCNN1A-217ENST00000542260 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
SCNN1A-217ENST00000542260 HIGD1BQ9P298 99 aa8.87□□□□□ -0.99
SCNN1A-217ENST00000542260 LCE2AQ5TA79 106 aaPredicted RBP8.86□□□□□ -0.99
SCNN1A-217ENST00000542260 SPRR4Q96PI1 79 aa8.86□□□□□ -0.99
SCNN1A-217ENST00000542260 KRTAP9-2Q9BYQ4 174 aa8.86□□□□□ -0.99
SCNN1A-217ENST00000542260 PPDPFQ9H3Y8 114 aa8.86□□□□□ -0.99
SCNN1A-217ENST00000542260 PCP4L1A6NKN8 68 aa8.85□□□□□ -0.99
SCNN1A-217ENST00000542260 PRYO14603 147 aa8.85□□□□□ -0.99
SCNN1A-217ENST00000542260 DDTP30046 118 aa8.85□□□□□ -0.99
SCNN1A-217ENST00000542260 C2orf91Q6ZV80 131 aa8.85□□□□□ -0.99
SCNN1A-217ENST00000542260 FP248Q71RG6 208 aaPredicted RBP8.85□□□□□ -0.99
SCNN1A-217ENST00000542260 A0A0U1RRA0 63 aa8.84□□□□□ -0.99
SCNN1A-217ENST00000542260 SMIM13P0DJ93 91 aa8.84□□□□□ -0.99
SCNN1A-217ENST00000542260 FAT4Q6V0I7 4981 aa8.84□□□□□ -0.99
SCNN1A-217ENST00000542260 Q6ZVH6 145 aa8.83□□□□□ -1
SCNN1A-217ENST00000542260 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
SCNN1A-217ENST00000542260 HIST1H4GQ99525 98 aa8.83□□□□□ -1
SCNN1A-217ENST00000542260 SPANXB1Q9NS25 103 aaPredicted RBP8.83□□□□□ -1
SCNN1A-217ENST00000542260 TAL2Q16559 108 aa8.82□□□□□ -1
SCNN1A-217ENST00000542260 COPS9Q8WXC6 57 aa8.82□□□□□ -1
SCNN1A-217ENST00000542260 SPANXDQ9BXN6 97 aa8.82□□□□□ -1
SCNN1A-217ENST00000542260 SPANXCQ9NY87 97 aa8.82□□□□□ -1
SCNN1A-217ENST00000542260 ETDCA0A1B0GVM5 59 aa8.81□□□□□ -1
SCNN1A-217ENST00000542260 HSD52Q0P140 79 aa8.81□□□□□ -1
SCNN1A-217ENST00000542260 NCR3O14931 201 aa8.8□□□□□ -1
SCNN1A-217ENST00000542260 SPRR1AP35321 89 aa8.8□□□□□ -1
SCNN1A-217ENST00000542260 MIR7-3HGQ8N6C7 128 aa8.8□□□□□ -1
SCNN1A-217ENST00000542260 LITAFQ99732 161 aa8.8□□□□□ -1
SCNN1A-217ENST00000542260 KCNQ1DNQ9H478 68 aa8.8□□□□□ -1
SCNN1A-217ENST00000542260 IFITM1P13164 125 aa8.79□□□□□ -1
SCNN1A-217ENST00000542260 ADAMTSL4-AS1Q5T5F5 129 aa8.79□□□□□ -1
SCNN1A-217ENST00000542260 Q8NBF4 154 aa8.79□□□□□ -1
SCNN1A-217ENST00000542260 SPINK1P00995 79 aa8.78□□□□□ -1
SCNN1A-217ENST00000542260 DAND5Q8N907 189 aa8.78□□□□□ -1
SCNN1A-217ENST00000542260 SMCR5Q8TEV8 140 aa8.78□□□□□ -1
SCNN1A-217ENST00000542260 M0R143 59 aa8.77□□□□□ -1.01
SCNN1A-217ENST00000542260 NPC2P61916 151 aa8.77□□□□□ -1.01
SCNN1A-217ENST00000542260 MUSTN1Q8IVN3 82 aa8.76□□□□□ -1.01
SCNN1A-217ENST00000542260 CEND1Q8N111 149 aa8.76□□□□□ -1.01
SCNN1A-217ENST00000542260 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
SCNN1A-217ENST00000542260 TRBV10-3A0A0K0K1G6 114 aa8.75□□□□□ -1.01
SCNN1A-217ENST00000542260 TMEM238LA0A1B0GVL6 79 aa8.75□□□□□ -1.01
SCNN1A-217ENST00000542260 A6NJY4 79 aa8.75□□□□□ -1.01
SCNN1A-217ENST00000542260 KRTAP4-16G5E9R7 235 aaPredicted RBP8.75□□□□□ -1.01
SCNN1A-217ENST00000542260 HINT1P49773 126 aaPredicted RBP8.75□□□□□ -1.01
SCNN1A-217ENST00000542260 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
SCNN1A-217ENST00000542260 KRTAP13-3Q3SY46 172 aa8.73□□□□□ -1.01
SCNN1A-217ENST00000542260 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
SCNN1A-217ENST00000542260 BVES-AS1Q5T3Y7 98 aa8.72□□□□□ -1.01
SCNN1A-217ENST00000542260 GAGE2AQ6NT46 116 aa8.72□□□□□ -1.01
SCNN1A-217ENST00000542260 LOC107984156A0A0G2JMH3 177 aa8.71□□□□□ -1.02
SCNN1A-217ENST00000542260 TRBV10-2A0A0K0K1G8 114 aa8.71□□□□□ -1.02
SCNN1A-217ENST00000542260 B5MCH6 92 aa8.71□□□□□ -1.02
SCNN1A-217ENST00000542260 BATFQ16520 125 aa8.71□□□□□ -1.02
SCNN1A-217ENST00000542260 ASB16-AS1Q495Z4 193 aa8.71□□□□□ -1.02
SCNN1A-217ENST00000542260 SOSTDC1Q6X4U4 206 aa8.71□□□□□ -1.02
SCNN1A-217ENST00000542260 ARL17AQ8IVW1 177 aa8.71□□□□□ -1.02
SCNN1A-217ENST00000542260 IGLV9-49A0A0B4J1Y8 123 aa8.7□□□□□ -1.02
SCNN1A-217ENST00000542260 A4D1N5 150 aa8.7□□□□□ -1.02
SCNN1A-217ENST00000542260 FXYD2P54710 66 aa8.7□□□□□ -1.02
SCNN1A-217ENST00000542260 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
SCNN1A-217ENST00000542260 MOBPQ13875 183 aa8.7□□□□□ -1.02
SCNN1A-217ENST00000542260 SSBP3-AS1Q7Z2R9 100 aa8.7□□□□□ -1.02
SCNN1A-217ENST00000542260 A6NDN8 102 aa8.69□□□□□ -1.02
SCNN1A-217ENST00000542260 NDUFC2O95298 119 aa8.68□□□□□ -1.02
SCNN1A-217ENST00000542260 Q6ZRX8 168 aa8.68□□□□□ -1.02
SCNN1A-217ENST00000542260 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
SCNN1A-217ENST00000542260 S100A7L2Q5SY68 101 aa8.67□□□□□ -1.02
SCNN1A-217ENST00000542260 RAB37Q96AX2 223 aa8.67□□□□□ -1.02
SCNN1A-217ENST00000542260 NHP2Q9NX24 153 aaKnown RBP8.67□□□□□ -1.02
SCNN1A-217ENST00000542260 SLC25A20O43772 301 aa8.66□□□□□ -1.02
SCNN1A-217ENST00000542260 LINC01547P58512 204 aaPredicted RBP8.66□□□□□ -1.02
SCNN1A-217ENST00000542260 Q8N377 158 aa8.66□□□□□ -1.02
SCNN1A-217ENST00000542260 A0A0B4J2C4 111 aa8.65□□□□□ -1.02
SCNN1A-217ENST00000542260 ERC2-IT1O76042 136 aa8.65□□□□□ -1.02
SCNN1A-217ENST00000542260 Q9BRP9 147 aa8.65□□□□□ -1.02
SCNN1A-217ENST00000542260 SNHG12Q9BXW3 62 aa8.65□□□□□ -1.02
SCNN1A-217ENST00000542260 TRAV13-2A0A0B4J235 113 aa8.64□□□□□ -1.03
SCNN1A-217ENST00000542260 KRTAP9-6A0A140TA67 174 aa8.64□□□□□ -1.03
SCNN1A-217ENST00000542260 CFC1BP0CG36 223 aa8.64□□□□□ -1.03
SCNN1A-217ENST00000542260 CFC1P0CG37 223 aa8.64□□□□□ -1.03
SCNN1A-217ENST00000542260 TRAV23DV6A0A075B6W5 121 aa8.63□□□□□ -1.03
SCNN1A-217ENST00000542260 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
SCNN1A-217ENST00000542260 A0A1B0GWB2 263 aa8.62□□□□□ -1.03
SCNN1A-217ENST00000542260 IGLV6-57P01721 117 aa8.62□□□□□ -1.03
SCNN1A-217ENST00000542260 OR13C6PQ8NH95 151 aa8.62□□□□□ -1.03
SCNN1A-217ENST00000542260 CBY1Q9Y3M2 126 aa8.62□□□□□ -1.03
SCNN1A-217ENST00000542260 COL5A1-AS1Q5SY13 56 aa8.61□□□□□ -1.03
SCNN1A-217ENST00000542260 PRO1854Q9UHT4 67 aa8.61□□□□□ -1.03
SCNN1A-217ENST00000542260 K7ERJ3 54 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms