RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	COPS9	Q8WXC6	57 aa		11.67	□□□□□ -0.54
ARF3-208	ENST00000541959		A0A087X002	238 aa		11.66	□□□□□ -0.54
ARF3-208	ENST00000541959	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.65	□□□□□ -0.54
ARF3-208	ENST00000541959		B5MCH6	92 aa		11.64	□□□□□ -0.55
ARF3-208	ENST00000541959	IFITM1	P13164	125 aa		11.64	□□□□□ -0.55
ARF3-208	ENST00000541959	TYMSOS	Q8TAI1	123 aa		11.64	□□□□□ -0.55
ARF3-208	ENST00000541959	SMCR5	Q8TEV8	140 aa		11.64	□□□□□ -0.55
ARF3-208	ENST00000541959	CBY1	Q9Y3M2	126 aa		11.64	□□□□□ -0.55
ARF3-208	ENST00000541959		Q6ZVH6	145 aa		11.63	□□□□□ -0.55
ARF3-208	ENST00000541959	MUSTN1	Q8IVN3	82 aa		11.63	□□□□□ -0.55
ARF3-208	ENST00000541959	LINC00518	Q8N0U6	118 aa		11.63	□□□□□ -0.55
ARF3-208	ENST00000541959	TMA7	Q9Y2S6	64 aa	Known RBP	11.63	□□□□□ -0.55
ARF3-208	ENST00000541959	ZNF73	O43830	326 aa	Predicted RBP	11.62	□□□□□ -0.55
ARF3-208	ENST00000541959	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.62	□□□□□ -0.55
ARF3-208	ENST00000541959	LRP2	P98164	4655 aa		11.61	□□□□□ -0.55
ARF3-208	ENST00000541959	HINT1	P49773	126 aa	Predicted RBP	11.61	□□□□□ -0.55
ARF3-208	ENST00000541959	FAM229B	Q4G0N7	80 aa		11.61	□□□□□ -0.55
ARF3-208	ENST00000541959	SPRR4	Q96PI1	79 aa		11.6	□□□□□ -0.55
ARF3-208	ENST00000541959		Q6ZRX8	168 aa		11.59	□□□□□ -0.55
ARF3-208	ENST00000541959	PPDPF	Q9H3Y8	114 aa		11.59	□□□□□ -0.55
ARF3-208	ENST00000541959	JOSD1	Q15040	202 aa	Predicted RBP	11.58	□□□□□ -0.56
ARF3-208	ENST00000541959	KRTAP13-2	Q52LG2	175 aa		11.58	□□□□□ -0.56
ARF3-208	ENST00000541959		A6NDN8	102 aa		11.57	□□□□□ -0.56
ARF3-208	ENST00000541959		Q9BRP9	147 aa		11.57	□□□□□ -0.56
ARF3-208	ENST00000541959	PAM16	Q9Y3D7	125 aa		11.57	□□□□□ -0.56
ARF3-208	ENST00000541959	ERC2-IT1	O76042	136 aa		11.56	□□□□□ -0.56
ARF3-208	ENST00000541959	COX8A	P10176	69 aa		11.55	□□□□□ -0.56
ARF3-208	ENST00000541959	SPATA45	Q537H7	98 aa		11.55	□□□□□ -0.56
ARF3-208	ENST00000541959	GAGE2A	Q6NT46	116 aa		11.55	□□□□□ -0.56
ARF3-208	ENST00000541959	VAMP8	Q9BV40	100 aa		11.55	□□□□□ -0.56
ARF3-208	ENST00000541959	TSPAN13	O95857	204 aa		11.54	□□□□□ -0.56
ARF3-208	ENST00000541959	C3orf22	Q8N5N4	141 aa		11.54	□□□□□ -0.56
ARF3-208	ENST00000541959	C14orf144	Q96I85	54 aa		11.53	□□□□□ -0.56
ARF3-208	ENST00000541959	C6orf99	Q4VX62	202 aa		11.52	□□□□□ -0.57
ARF3-208	ENST00000541959	COX7B	P24311	80 aa		11.51	□□□□□ -0.57
ARF3-208	ENST00000541959	HIST1H4G	Q99525	98 aa		11.51	□□□□□ -0.57
ARF3-208	ENST00000541959	TRAV13-2	A0A0B4J235	113 aa		11.5	□□□□□ -0.57
ARF3-208	ENST00000541959	LINC00304	Q8N9R0	145 aa		11.5	□□□□□ -0.57
ARF3-208	ENST00000541959		A4D1N5	150 aa		11.48	□□□□□ -0.57
ARF3-208	ENST00000541959	DLEU1	O43261	78 aa		11.47	□□□□□ -0.57
ARF3-208	ENST00000541959	ELOF1	P60002	83 aa	Known RBP	11.46	□□□□□ -0.57
ARF3-208	ENST00000541959	SLC25A34	Q6PIV7	304 aa		11.46	□□□□□ -0.57
ARF3-208	ENST00000541959	ST20-AS1	Q8NBB2	130 aa		11.46	□□□□□ -0.57
ARF3-208	ENST00000541959	DHRS4-AS1	Q9P1J3	65 aa		11.46	□□□□□ -0.57
ARF3-208	ENST00000541959	IGLV9-49	A0A0B4J1Y8	123 aa		11.45	□□□□□ -0.58
ARF3-208	ENST00000541959	LINC00483	Q53H64	154 aa		11.45	□□□□□ -0.58
ARF3-208	ENST00000541959	C12orf57	Q99622	126 aa		11.45	□□□□□ -0.58
ARF3-208	ENST00000541959	PRR4	Q16378	134 aa		11.43	□□□□□ -0.58
ARF3-208	ENST00000541959	PYY3	Q5JQD4	70 aa		11.43	□□□□□ -0.58
ARF3-208	ENST00000541959	SMIM11B	Q8TCY0	68 aa		11.43	□□□□□ -0.58
ARF3-208	ENST00000541959	LPA	P08519	4548 aa		11.42	□□□□□ -0.58
ARF3-208	ENST00000541959		A0A1B0GWB2	263 aa		11.42	□□□□□ -0.58
ARF3-208	ENST00000541959	MOBP	Q13875	183 aa		11.41	□□□□□ -0.58
ARF3-208	ENST00000541959		Q8NBF4	154 aa		11.41	□□□□□ -0.58
ARF3-208	ENST00000541959	RNF213	Q63HN8	5207 aa		11.4	□□□□□ -0.58
ARF3-208	ENST00000541959	TRBV7-6	A0A0J9YX20	115 aa		11.4	□□□□□ -0.58
ARF3-208	ENST00000541959	C4orf48	Q5BLP8	95 aa		11.4	□□□□□ -0.58
ARF3-208	ENST00000541959	C9orf153	Q5TBE3	101 aa		11.39	□□□□□ -0.59
ARF3-208	ENST00000541959	HIGD1B	Q9P298	99 aa		11.39	□□□□□ -0.59
ARF3-208	ENST00000541959	DEFB105A	Q8NG35	78 aa		11.38	□□□□□ -0.59
ARF3-208	ENST00000541959	TAL2	Q16559	108 aa		11.37	□□□□□ -0.59
ARF3-208	ENST00000541959	C2orf91	Q6ZV80	131 aa		11.37	□□□□□ -0.59
ARF3-208	ENST00000541959	VAMP3	Q15836	100 aa		11.36	□□□□□ -0.59
ARF3-208	ENST00000541959	SPAG11A	Q6PDA7	123 aa		11.35	□□□□□ -0.59
ARF3-208	ENST00000541959	RETNLB	Q9BQ08	111 aa		11.35	□□□□□ -0.59
ARF3-208	ENST00000541959		H7C2G1	150 aa		11.34	□□□□□ -0.59
ARF3-208	ENST00000541959	RAB37	Q96AX2	223 aa		11.34	□□□□□ -0.59
ARF3-208	ENST00000541959	SSBP3-AS1	Q7Z2R9	100 aa		11.33	□□□□□ -0.6
ARF3-208	ENST00000541959	NHP2	Q9NX24	153 aa	Known RBP	11.33	□□□□□ -0.6
ARF3-208	ENST00000541959	SLC25A20	O43772	301 aa		11.32	□□□□□ -0.6
ARF3-208	ENST00000541959	LAMTOR3	Q9UHA4	124 aa		11.32	□□□□□ -0.6
ARF3-208	ENST00000541959	SPRR1B	P22528	89 aa		11.31	□□□□□ -0.6
ARF3-208	ENST00000541959	CFC1B	P0CG36	223 aa		11.3	□□□□□ -0.6
ARF3-208	ENST00000541959	CFC1	P0CG37	223 aa		11.3	□□□□□ -0.6
ARF3-208	ENST00000541959		Q1RN00	199 aa		11.3	□□□□□ -0.6
ARF3-208	ENST00000541959	CEND1	Q8N111	149 aa		11.3	□□□□□ -0.6
ARF3-208	ENST00000541959	TEX49	A0A1B0GTD5	131 aa		11.29	□□□□□ -0.6
ARF3-208	ENST00000541959	TMEM238L	A0A1B0GVL6	79 aa		11.27	□□□□□ -0.61
ARF3-208	ENST00000541959		A6NJY4	79 aa		11.27	□□□□□ -0.61
ARF3-208	ENST00000541959	CTAG1A	P78358	180 aa		11.27	□□□□□ -0.61
ARF3-208	ENST00000541959		A0A0B4J2C4	111 aa		11.26	□□□□□ -0.61
ARF3-208	ENST00000541959	SPINK1	P00995	79 aa		11.26	□□□□□ -0.61
ARF3-208	ENST00000541959	BVES-AS1	Q5T3Y7	98 aa		11.26	□□□□□ -0.61
ARF3-208	ENST00000541959	LINC00575	Q6W349	94 aa		11.26	□□□□□ -0.61
ARF3-208	ENST00000541959	FXYD2	P54710	66 aa		11.25	□□□□□ -0.61
ARF3-208	ENST00000541959	hADV29S1	A0JD25	119 aa		11.24	□□□□□ -0.61
ARF3-208	ENST00000541959	UQCR10	Q9UDW1	63 aa		11.24	□□□□□ -0.61
ARF3-208	ENST00000541959	HSD52	Q0P140	79 aa		11.23	□□□□□ -0.61
ARF3-208	ENST00000541959	IGLV5-48	A0A075B6I7	105 aa		11.22	□□□□□ -0.61
ARF3-208	ENST00000541959	LINC01547	P58512	204 aa	Predicted RBP	11.22	□□□□□ -0.61
ARF3-208	ENST00000541959	HRCT1	Q6UXD1	115 aa		11.21	□□□□□ -0.61
ARF3-208	ENST00000541959		Q6ZQY7	126 aa		11.21	□□□□□ -0.61
ARF3-208	ENST00000541959	IGLV7-46	A0A075B6I9	117 aa		11.19	□□□□□ -0.62
ARF3-208	ENST00000541959	SMIM29	Q86T20	159 aa		11.19	□□□□□ -0.62
ARF3-208	ENST00000541959		Q8N377	158 aa		11.19	□□□□□ -0.62
ARF3-208	ENST00000541959	PRO1854	Q9UHT4	67 aa		11.19	□□□□□ -0.62
ARF3-208	ENST00000541959	PRO1933	Q9H354	126 aa		11.17	□□□□□ -0.62
ARF3-208	ENST00000541959		F8WEM9	126 aa		11.16	□□□□□ -0.62
ARF3-208	ENST00000541959	SNCG	O76070	127 aa		11.15	□□□□□ -0.62
ARF3-208	ENST00000541959	RPS29	P62273	56 aa	Known RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms