RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 LCE2AQ5TA79 106 aaPredicted RBP7.89□□□□□ -1.15
SUDS3-203ENST00000541591 SYS1-DBNDD2H3BUS1 97 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST1H2BKO60814 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 NDUFC2O95298 119 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST1H2BJP06899 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST1H2BOP23527 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST1H2BBP33778 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST1H2BDP58876 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST1H2BCP62807 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST2H2BEQ16778 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST1H2BHQ93079 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST1H2BNQ99877 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 HIST1H2BMQ99879 126 aa7.88□□□□□ -1.15
SUDS3-203ENST00000541591 ZNF73O43830 326 aaPredicted RBP7.87□□□□□ -1.15
SUDS3-203ENST00000541591 SPINK1P00995 79 aa7.87□□□□□ -1.15
SUDS3-203ENST00000541591 FP248Q71RG6 208 aaPredicted RBP7.87□□□□□ -1.15
SUDS3-203ENST00000541591 Q8N377 158 aa7.87□□□□□ -1.15
SUDS3-203ENST00000541591 OR13C6PQ8NH95 151 aa7.87□□□□□ -1.15
SUDS3-203ENST00000541591 LITAFQ99732 161 aa7.87□□□□□ -1.15
SUDS3-203ENST00000541591 CTAG1AP78358 180 aa7.86□□□□□ -1.15
SUDS3-203ENST00000541591 LINC00308Q8TCZ7 52 aa7.85□□□□□ -1.15
SUDS3-203ENST00000541591 KRTAP4-1Q9BYQ7 146 aa7.85□□□□□ -1.15
SUDS3-203ENST00000541591 ZNF815PA8K554 130 aa7.84□□□□□ -1.15
SUDS3-203ENST00000541591 HRCT1Q6UXD1 115 aa7.84□□□□□ -1.15
SUDS3-203ENST00000541591 KRTAP9-2Q9BYQ4 174 aa7.84□□□□□ -1.15
SUDS3-203ENST00000541591 LINC01545Q5VT33 79 aa7.83□□□□□ -1.16
SUDS3-203ENST00000541591 SSBP3-AS1Q7Z2R9 100 aa7.83□□□□□ -1.16
SUDS3-203ENST00000541591 C3orf79P0CE67 100 aa7.82□□□□□ -1.16
SUDS3-203ENST00000541591 JOSD1Q15040 202 aaPredicted RBP7.82□□□□□ -1.16
SUDS3-203ENST00000541591 SPANXCQ9NY87 97 aa7.82□□□□□ -1.16
SUDS3-203ENST00000541591 KRTDAPP60985 99 aa7.81□□□□□ -1.16
SUDS3-203ENST00000541591 SLC25A20O43772 301 aa7.79□□□□□ -1.16
SUDS3-203ENST00000541591 ASB16-AS1Q495Z4 193 aa7.79□□□□□ -1.16
SUDS3-203ENST00000541591 PET117Q6UWS5 81 aa7.79□□□□□ -1.16
SUDS3-203ENST00000541591 ATOH7Q8N100 152 aa7.79□□□□□ -1.16
SUDS3-203ENST00000541591 ANKRD39Q53RE8 183 aa7.78□□□□□ -1.16
SUDS3-203ENST00000541591 DEFB105AQ8NG35 78 aa7.78□□□□□ -1.16
SUDS3-203ENST00000541591 TIMM17BO60830 172 aa7.77□□□□□ -1.17
SUDS3-203ENST00000541591 HINT1P49773 126 aaPredicted RBP7.77□□□□□ -1.17
SUDS3-203ENST00000541591 Q1RN00 199 aa7.77□□□□□ -1.17
SUDS3-203ENST00000541591 C6orf99Q4VX62 202 aa7.77□□□□□ -1.17
SUDS3-203ENST00000541591 COX7BP24311 80 aa7.76□□□□□ -1.17
SUDS3-203ENST00000541591 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
SUDS3-203ENST00000541591 A0A0G2JQZ4 141 aa7.75□□□□□ -1.17
SUDS3-203ENST00000541591 XP32Q5T750 250 aa7.75□□□□□ -1.17
SUDS3-203ENST00000541591 SPANXDQ9BXN6 97 aa7.75□□□□□ -1.17
SUDS3-203ENST00000541591 C9orf92A6NGG3 77 aa7.74□□□□□ -1.17
SUDS3-203ENST00000541591 H7C2G1 150 aa7.74□□□□□ -1.17
SUDS3-203ENST00000541591 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
SUDS3-203ENST00000541591 SCGB1D4Q6XE38 83 aa7.74□□□□□ -1.17
SUDS3-203ENST00000541591 SPRR1BP22528 89 aa7.73□□□□□ -1.17
SUDS3-203ENST00000541591 SEC61BP60468 96 aaKnown RBP7.73□□□□□ -1.17
SUDS3-203ENST00000541591 DHRS4-AS1Q9P1J3 65 aa7.73□□□□□ -1.17
SUDS3-203ENST00000541591 TAL2Q16559 108 aa7.72□□□□□ -1.17
SUDS3-203ENST00000541591 PCP2Q8IVA1 136 aa7.72□□□□□ -1.17
SUDS3-203ENST00000541591 CBY1Q9Y3M2 126 aa7.72□□□□□ -1.17
SUDS3-203ENST00000541591 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.18
SUDS3-203ENST00000541591 A6NDN8 102 aa7.7□□□□□ -1.18
SUDS3-203ENST00000541591 MUSTN1Q8IVN3 82 aa7.7□□□□□ -1.18
SUDS3-203ENST00000541591 COA6Q5JTJ3 125 aaKnown RBP7.69□□□□□ -1.18
SUDS3-203ENST00000541591 LINC00518Q8N0U6 118 aa7.69□□□□□ -1.18
SUDS3-203ENST00000541591 C20orf202A1L168 122 aa7.68□□□□□ -1.18
SUDS3-203ENST00000541591 C5orf52A6NGY3 159 aa7.68□□□□□ -1.18
SUDS3-203ENST00000541591 LIMD2Q9BT23 127 aa7.68□□□□□ -1.18
SUDS3-203ENST00000541591 LINC01547P58512 204 aaPredicted RBP7.67□□□□□ -1.18
SUDS3-203ENST00000541591 SLC25A34Q6PIV7 304 aa7.67□□□□□ -1.18
SUDS3-203ENST00000541591 SMIM29Q86T20 159 aa7.67□□□□□ -1.18
SUDS3-203ENST00000541591 TEX49A0A1B0GTD5 131 aa7.65□□□□□ -1.18
SUDS3-203ENST00000541591 PCOTHQ58A44 107 aa7.65□□□□□ -1.18
SUDS3-203ENST00000541591 A0A1B0GWB2 263 aa7.64□□□□□ -1.19
SUDS3-203ENST00000541591 PRO1933Q9H354 126 aa7.64□□□□□ -1.19
SUDS3-203ENST00000541591 IFITM1P13164 125 aa7.63□□□□□ -1.19
SUDS3-203ENST00000541591 SMIM11BQ8TCY0 68 aa7.63□□□□□ -1.19
SUDS3-203ENST00000541591 IGLV8-61A0A075B6I0 122 aa7.61□□□□□ -1.19
SUDS3-203ENST00000541591 TRBV7-6A0A0J9YX20 115 aa7.61□□□□□ -1.19
SUDS3-203ENST00000541591 IGLV5-48A0A075B6I7 105 aa7.6□□□□□ -1.19
SUDS3-203ENST00000541591 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
SUDS3-203ENST00000541591 LCE2CQ5TA81 110 aa7.6□□□□□ -1.19
SUDS3-203ENST00000541591 COPS9Q8WXC6 57 aa7.6□□□□□ -1.19
SUDS3-203ENST00000541591 AKR1D1P51857 326 aa7.59□□□□□ -1.19
SUDS3-203ENST00000541591 CD164Q04900 197 aa7.58□□□□□ -1.2
SUDS3-203ENST00000541591 KRTAP19-2Q3LHN2 52 aa7.58□□□□□ -1.2
SUDS3-203ENST00000541591 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
SUDS3-203ENST00000541591 HIST3H2BBQ8N257 126 aa7.58□□□□□ -1.2
SUDS3-203ENST00000541591 C12orf57Q99622 126 aa7.58□□□□□ -1.2
SUDS3-203ENST00000541591 TRAV13-2A0A0B4J235 113 aa7.57□□□□□ -1.2
SUDS3-203ENST00000541591 Q6ZVH6 145 aa7.57□□□□□ -1.2
SUDS3-203ENST00000541591 HIST1H2BLQ99880 126 aa7.57□□□□□ -1.2
SUDS3-203ENST00000541591 A4D1N5 150 aa7.55□□□□□ -1.2
SUDS3-203ENST00000541591 S100A2P29034 98 aa7.55□□□□□ -1.2
SUDS3-203ENST00000541591 Q6ZQY7 126 aa7.53□□□□□ -1.2
SUDS3-203ENST00000541591 NHP2Q9NX24 153 aaKnown RBP7.53□□□□□ -1.2
SUDS3-203ENST00000541591 MT1HP80294 61 aa7.52□□□□□ -1.21
SUDS3-203ENST00000541591 LINC00575Q6W349 94 aa7.52□□□□□ -1.21
SUDS3-203ENST00000541591 HSBP1L1C9JCN9 74 aa7.51□□□□□ -1.21
SUDS3-203ENST00000541591 F8WEM9 126 aa7.51□□□□□ -1.21
SUDS3-203ENST00000541591 SNRPEP62304 92 aaKnown RBP7.5□□□□□ -1.21
SUDS3-203ENST00000541591 Q5XG85 94 aa7.5□□□□□ -1.21
SUDS3-203ENST00000541591 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms