RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 RHPN1-AS1Q9BWJ2 59 aa3.4□□□□□ -1.87
DDB1-219ENST00000541513 COL7A1Q02388 2944 aa3.39□□□□□ -1.87
DDB1-219ENST00000541513 TGP01266 2768 aa3.39□□□□□ -1.87
DDB1-219ENST00000541513 NBEAL2Q6ZNJ1 2754 aa3.39□□□□□ -1.87
DDB1-219ENST00000541513 MYMXA0A1B0GTQ4 84 aa3.39□□□□□ -1.87
DDB1-219ENST00000541513 KRTAP29-1A8MX34 341 aaPredicted RBP3.39□□□□□ -1.87
DDB1-219ENST00000541513 KRTAP10-11P60412 298 aa3.39□□□□□ -1.87
DDB1-219ENST00000541513 Q6ZQT0 140 aa3.39□□□□□ -1.87
DDB1-219ENST00000541513 FAM19A2Q8N3H0 131 aa3.39□□□□□ -1.87
DDB1-219ENST00000541513 Q8N814 137 aa3.39□□□□□ -1.87
DDB1-219ENST00000541513 KIF25-AS1Q9Y6Z4 181 aa3.39□□□□□ -1.87
DDB1-219ENST00000541513 TRBV7-3A0A075B6L6 115 aa3.38□□□□□ -1.87
DDB1-219ENST00000541513 ROMO1P60602 79 aa3.38□□□□□ -1.87
DDB1-219ENST00000541513 SERF2P84101 59 aa3.38□□□□□ -1.87
DDB1-219ENST00000541513 C10orf113Q5VZT2 155 aa3.38□□□□□ -1.87
DDB1-219ENST00000541513 GNG13Q9P2W3 67 aa3.38□□□□□ -1.87
DDB1-219ENST00000541513 DNAH9Q9NYC9 4486 aa3.38□□□□□ -1.87
DDB1-219ENST00000541513 STAB2Q8WWQ8 2551 aa3.37□□□□□ -1.87
DDB1-219ENST00000541513 IGKV2D-26A0A0A0MRZ7 120 aa3.37□□□□□ -1.87
DDB1-219ENST00000541513 TRBV10-3A0A0K0K1G6 114 aa3.37□□□□□ -1.87
DDB1-219ENST00000541513 C11orf86A6NJI1 115 aa3.37□□□□□ -1.87
DDB1-219ENST00000541513 K7EIL1 84 aa3.37□□□□□ -1.87
DDB1-219ENST00000541513 C9orf116Q5BN46 136 aaPredicted RBP3.37□□□□□ -1.87
DDB1-219ENST00000541513 LINC00612Q8N6U2 182 aa3.37□□□□□ -1.87
DDB1-219ENST00000541513 FAM167A-AS1Q96KT0 104 aa3.37□□□□□ -1.87
DDB1-219ENST00000541513 PRO1854Q9UHT4 67 aa3.37□□□□□ -1.87
DDB1-219ENST00000541513 TENM3Q9P273 2699 aa3.37□□□□□ -1.87
DDB1-219ENST00000541513 HCG22E2RYF7 251 aa3.36□□□□□ -1.87
DDB1-219ENST00000541513 IGKV3-20P01619 116 aa3.36□□□□□ -1.87
DDB1-219ENST00000541513 PDE6HQ13956 83 aa3.36□□□□□ -1.87
DDB1-219ENST00000541513 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.36□□□□□ -1.87
DDB1-219ENST00000541513 SPTSSBQ8NFR3 76 aa3.36□□□□□ -1.87
DDB1-219ENST00000541513 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
DDB1-219ENST00000541513 TMEM14CQ9P0S9 112 aa3.36□□□□□ -1.87
DDB1-219ENST00000541513 IGKV3-7A0A075B6H7 116 aa3.35□□□□□ -1.87
DDB1-219ENST00000541513 PRB2P02812 416 aaPredicted RBP3.35□□□□□ -1.87
DDB1-219ENST00000541513 Q6JHZ5 121 aa3.35□□□□□ -1.87
DDB1-219ENST00000541513 HUWE1Q7Z6Z7 4374 aaKnown RBP3.34□□□□□ -1.87
DDB1-219ENST00000541513 TRBV25-1A0A075B6N4 114 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 IGHV3-64A0A075B6Q5 118 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 CTXND1A0A1B0GTU2 59 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 A8MTW9 85 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 H3BVH4 76 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 MIFP14174 115 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 IFI27P40305 119 aaPredicted RBP3.34□□□□□ -1.87
DDB1-219ENST00000541513 DEFB131AP59861 70 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 LINC00322Q6ZN03 302 aaPredicted RBP3.34□□□□□ -1.87
DDB1-219ENST00000541513 C20orf197Q8N268 126 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 LYPD1Q8N2G4 141 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 WFDC10AQ9H1F0 79 aa3.34□□□□□ -1.87
DDB1-219ENST00000541513 TRAV22A0A0B4J277 110 aa3.33□□□□□ -1.88
DDB1-219ENST00000541513 CRPP02741 224 aa3.33□□□□□ -1.88
DDB1-219ENST00000541513 ARL14EPLP0DKL9 152 aa3.33□□□□□ -1.88
DDB1-219ENST00000541513 C1orf134Q5TEV5 83 aa3.33□□□□□ -1.88
DDB1-219ENST00000541513 C14orf132Q9NPU4 83 aa3.33□□□□□ -1.88
DDB1-219ENST00000541513 TMEM167BQ9NRX6 74 aa3.33□□□□□ -1.88
DDB1-219ENST00000541513 A0A087WSZ3 146 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 TMSB15BA0A087X1C1 80 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 A0A0J9YX75 114 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 F8WEM9 126 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 COX6CP09669 75 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 ATXN8Q156A1 80 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 KRTAP25-1Q3LHN0 102 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 ATP5EP2Q5VTU8 51 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 CASC2Q6XLA1 102 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 LIMD2Q9BT23 127 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
DDB1-219ENST00000541513 M0R3E3 92 aa3.31□□□□□ -1.88
DDB1-219ENST00000541513 ERC2-IT1O76042 136 aa3.31□□□□□ -1.88
DDB1-219ENST00000541513 LEPROTL1O95214 131 aa3.31□□□□□ -1.88
DDB1-219ENST00000541513 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
DDB1-219ENST00000541513 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
DDB1-219ENST00000541513 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
DDB1-219ENST00000541513 SDHAF1A6NFY7 115 aa3.3□□□□□ -1.88
DDB1-219ENST00000541513 BAALC-AS2P0C853 105 aa3.3□□□□□ -1.88
DDB1-219ENST00000541513 UBE2D1P51668 147 aa3.3□□□□□ -1.88
DDB1-219ENST00000541513 DEFB1P60022 68 aa3.3□□□□□ -1.88
DDB1-219ENST00000541513 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
DDB1-219ENST00000541513 Q5VV11 94 aa3.3□□□□□ -1.88
DDB1-219ENST00000541513 TXNDC17Q9BRA2 123 aa3.3□□□□□ -1.88
DDB1-219ENST00000541513 UBE2D4Q9Y2X8 147 aa3.3□□□□□ -1.88
DDB1-219ENST00000541513 IGLV10-54A0A075B6I4 117 aa3.29□□□□□ -1.88
DDB1-219ENST00000541513 IGKV2-40A0A087WW87 121 aaPredicted RBP3.29□□□□□ -1.88
DDB1-219ENST00000541513 TEX49A0A1B0GTD5 131 aa3.29□□□□□ -1.88
DDB1-219ENST00000541513 ZNF815PA8K554 130 aa3.29□□□□□ -1.88
DDB1-219ENST00000541513 IGKV2D-40P01614 121 aaPredicted RBP3.29□□□□□ -1.88
DDB1-219ENST00000541513 LENEPQ9Y5L5 61 aa3.29□□□□□ -1.88
DDB1-219ENST00000541513 MUC4Q99102 2169 aa3.29□□□□□ -1.88
DDB1-219ENST00000541513 CHKB-CPT1BH3BT56 60 aa3.28□□□□□ -1.88
DDB1-219ENST00000541513 PSCAO43653 123 aa3.28□□□□□ -1.88
DDB1-219ENST00000541513 MOBPQ13875 183 aa3.28□□□□□ -1.88
DDB1-219ENST00000541513 SPINK13Q1W4C9 94 aa3.28□□□□□ -1.88
DDB1-219ENST00000541513 DEFB135Q30KP9 77 aa3.28□□□□□ -1.88
DDB1-219ENST00000541513 TRBV6-1A0A0K0K1D8 114 aa3.27□□□□□ -1.89
DDB1-219ENST00000541513 PRB4P10163 310 aaPredicted RBP3.27□□□□□ -1.89
DDB1-219ENST00000541513 LINC00483Q53H64 154 aa3.27□□□□□ -1.89
DDB1-219ENST00000541513 SFTA2Q6UW10 78 aa3.27□□□□□ -1.89
DDB1-219ENST00000541513 C2orf82Q6UX34 121 aa3.27□□□□□ -1.89
DDB1-219ENST00000541513 PSORS1C2Q9UIG4 136 aa3.27□□□□□ -1.89
DDB1-219ENST00000541513 KLK12Q9UKR0 248 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms