RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 HERVK_113P61574 105 aa3.42□□□□□ -1.86
SUDS3-202ENST00000541280 S100A12P80511 92 aa3.42□□□□□ -1.86
SUDS3-202ENST00000541280 KRTAP11-1Q8IUC1 163 aa3.42□□□□□ -1.86
SUDS3-202ENST00000541280 PLEKHB2Q96CS7 222 aa3.42□□□□□ -1.86
SUDS3-202ENST00000541280 IGKV2D-26A0A0A0MRZ7 120 aa3.41□□□□□ -1.86
SUDS3-202ENST00000541280 SERF1AO75920 110 aa3.41□□□□□ -1.86
SUDS3-202ENST00000541280 DPM2O94777 84 aa3.41□□□□□ -1.86
SUDS3-202ENST00000541280 UBE2AP49459 152 aa3.41□□□□□ -1.86
SUDS3-202ENST00000541280 MEIG1Q5JSS6 88 aa3.41□□□□□ -1.86
SUDS3-202ENST00000541280 FAM19A2Q8N3H0 131 aa3.41□□□□□ -1.86
SUDS3-202ENST00000541280 LOC107984156A0A0G2JMH3 177 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 RPL37AP8A6NKH3 93 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 M0R378 163 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 LEPROTO15243 131 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 IGKCP01834 107 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 CRYGAP11844 174 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 AKR1D1P51857 326 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 ARL17AQ8IVW1 177 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 NDUFA12Q9UI09 145 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 CBY1Q9Y3M2 126 aa3.4□□□□□ -1.87
SUDS3-202ENST00000541280 MYCBP2O75592 4640 aa3.39□□□□□ -1.87
SUDS3-202ENST00000541280 FABP4P15090 132 aa3.39□□□□□ -1.87
SUDS3-202ENST00000541280 LGALS3P17931 250 aaKnown RBP3.39□□□□□ -1.87
SUDS3-202ENST00000541280 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
SUDS3-202ENST00000541280 IGKV2-28A0A075B6P5 120 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 TRBV10-2A0A0K0K1G8 114 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 PCP4L1A6NKN8 68 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 H0Y8G0 127 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 J3QQQ9 107 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 IGKV2D-28P01615 120 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 SMIM13P0DJ93 91 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 PET117Q6UWS5 81 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 FAM19A1Q7Z5A9 133 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 BOD1L2Q8IYS8 172 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 TMEM126AQ9H061 195 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 KCNQ1DNQ9H478 68 aa3.38□□□□□ -1.87
SUDS3-202ENST00000541280 ZNF706Q9Y5V0 76 aaPredicted RBP3.38□□□□□ -1.87
SUDS3-202ENST00000541280 A0A0U1RRA0 63 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 E9PLD3 99 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 SYS1-DBNDD2H3BUS1 97 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST1H2BKO60814 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 NDUFC2O95298 119 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST1H2BJP06899 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST1H2BOP23527 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST1H2BBP33778 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST1H2BDP58876 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST1H2BCP62807 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST2H2BEQ16778 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 COA6Q5JTJ3 125 aaKnown RBP3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.37□□□□□ -1.87
SUDS3-202ENST00000541280 KRTAP13-1Q8IUC0 172 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 MIR7-3HGQ8N6C7 128 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 LINC00337Q8N6G1 96 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 TYMSOSQ8TAI1 123 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST1H2BHQ93079 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST1H2BNQ99877 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 HIST1H2BMQ99879 126 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 MIEN1Q9BRT3 115 aa3.37□□□□□ -1.87
SUDS3-202ENST00000541280 C20orf202A1L168 122 aa3.36□□□□□ -1.87
SUDS3-202ENST00000541280 SPAG11AQ6PDA7 123 aa3.36□□□□□ -1.87
SUDS3-202ENST00000541280 LINC00518Q8N0U6 118 aa3.36□□□□□ -1.87
SUDS3-202ENST00000541280 FAM218AQ96MZ4 157 aa3.36□□□□□ -1.87
SUDS3-202ENST00000541280 HERC1Q15751 4861 aa3.36□□□□□ -1.87
SUDS3-202ENST00000541280 ETDCA0A1B0GVM5 59 aa3.35□□□□□ -1.87
SUDS3-202ENST00000541280 TMEM238C9JI98 176 aa3.35□□□□□ -1.87
SUDS3-202ENST00000541280 TIMM17BO60830 172 aa3.35□□□□□ -1.87
SUDS3-202ENST00000541280 SPRR1AP35321 89 aa3.35□□□□□ -1.87
SUDS3-202ENST00000541280 HINT1P49773 126 aaPredicted RBP3.35□□□□□ -1.87
SUDS3-202ENST00000541280 JOSD1Q15040 202 aaPredicted RBP3.35□□□□□ -1.87
SUDS3-202ENST00000541280 LINC01545Q5VT33 79 aa3.35□□□□□ -1.87
SUDS3-202ENST00000541280 COPS9Q8WXC6 57 aa3.35□□□□□ -1.87
SUDS3-202ENST00000541280 SPANXB1Q9NS25 103 aaPredicted RBP3.35□□□□□ -1.87
SUDS3-202ENST00000541280 C5orf52A6NGY3 159 aa3.34□□□□□ -1.87
SUDS3-202ENST00000541280 DDTP30046 118 aa3.34□□□□□ -1.87
SUDS3-202ENST00000541280 PRLHP81277 87 aa3.34□□□□□ -1.87
SUDS3-202ENST00000541280 S100A7L2Q5SY68 101 aa3.34□□□□□ -1.87
SUDS3-202ENST00000541280 LRP1Q07954 4544 aaKnown RBP3.34□□□□□ -1.88
SUDS3-202ENST00000541280 A0A0J9YXY3 114 aa3.33□□□□□ -1.88
SUDS3-202ENST00000541280 NCR3O14931 201 aa3.33□□□□□ -1.88
SUDS3-202ENST00000541280 TSPEAR-AS2P59090 65 aa3.33□□□□□ -1.88
SUDS3-202ENST00000541280 Q6ZVH6 145 aa3.33□□□□□ -1.88
SUDS3-202ENST00000541280 Q8NDZ9 215 aa3.33□□□□□ -1.88
SUDS3-202ENST00000541280 PMCHL2Q9BQD1 86 aa3.33□□□□□ -1.88
SUDS3-202ENST00000541280 HIGD2AQ9BW72 106 aa3.33□□□□□ -1.88
SUDS3-202ENST00000541280 TRBV10-3A0A0K0K1G6 114 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 KRTAP4-16G5E9R7 235 aaPredicted RBP3.32□□□□□ -1.88
SUDS3-202ENST00000541280 IGLV6-57P01721 117 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 C3orf79P0CE67 100 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 PRR4Q16378 134 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
SUDS3-202ENST00000541280 SSBP3-AS1Q7Z2R9 100 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 LINC00304Q8N9R0 145 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 SPRR4Q96PI1 79 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 PPDPFQ9H3Y8 114 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 SPANXCQ9NY87 97 aa3.32□□□□□ -1.88
SUDS3-202ENST00000541280 TRAV23DV6A0A075B6W5 121 aa3.31□□□□□ -1.88
SUDS3-202ENST00000541280 ZNF815PA8K554 130 aa3.31□□□□□ -1.88
SUDS3-202ENST00000541280 TSPAN13O95857 204 aa3.31□□□□□ -1.88
SUDS3-202ENST00000541280 IFITM1P13164 125 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms