RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, human

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00943-206	ENST00000540250	LRCOL1	A6NCL2	159 aa		5.06	□□□□□ -1.6
LINC00943-206	ENST00000540250	NCR3	O14931	201 aa		5.06	□□□□□ -1.6
LINC00943-206	ENST00000540250	LY6G6C	O95867	125 aa		5.06	□□□□□ -1.6
LINC00943-206	ENST00000540250	CNBP	P62633	177 aa	Known RBP	5.06	□□□□□ -1.6
LINC00943-206	ENST00000540250	RPL18A	Q02543	176 aa	Known RBP	5.06	□□□□□ -1.6
LINC00943-206	ENST00000540250		Q6ZRP5	223 aa		5.06	□□□□□ -1.6
LINC00943-206	ENST00000540250		Q8NDZ9	215 aa		5.06	□□□□□ -1.6
LINC00943-206	ENST00000540250	XAGE1A	Q9HD64	81 aa		5.06	□□□□□ -1.6
LINC00943-206	ENST00000540250	TRBV20-1	A0A075B6N2	111 aa		5.05	□□□□□ -1.6
LINC00943-206	ENST00000540250	LOC107984640	A0A0U1RRK4	108 aa		5.05	□□□□□ -1.6
LINC00943-206	ENST00000540250	COX6C	P09669	75 aa		5.05	□□□□□ -1.6
LINC00943-206	ENST00000540250	SCGB1C2	P0DMR2	95 aa		5.05	□□□□□ -1.6
LINC00943-206	ENST00000540250	OR13C6P	Q8NH95	151 aa		5.05	□□□□□ -1.6
LINC00943-206	ENST00000540250	LYST	Q99698	3801 aa		5.05	□□□□□ -1.6
LINC00943-206	ENST00000540250	DNAH1	Q9P2D7	4330 aa		5.04	□□□□□ -1.6
LINC00943-206	ENST00000540250	TRBV10-2	A0A0K0K1G8	114 aa		5.04	□□□□□ -1.6
LINC00943-206	ENST00000540250	TCL1B	O95988	128 aa		5.04	□□□□□ -1.6
LINC00943-206	ENST00000540250	RPL28	P46779	137 aa	Known RBP	5.04	□□□□□ -1.6
LINC00943-206	ENST00000540250	PRR3	P79522	188 aa	Known RBP	5.04	□□□□□ -1.6
LINC00943-206	ENST00000540250	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.03	□□□□□ -1.6
LINC00943-206	ENST00000540250	S100A7L2	Q5SY68	101 aa		5.03	□□□□□ -1.6
LINC00943-206	ENST00000540250	C9orf129	Q5T035	196 aa	Known RBP	5.03	□□□□□ -1.6
LINC00943-206	ENST00000540250	C1orf134	Q5TEV5	83 aa		5.03	□□□□□ -1.6
LINC00943-206	ENST00000540250	SMIM11B	Q8TCY0	68 aa		5.03	□□□□□ -1.6
LINC00943-206	ENST00000540250	TMEM126A	Q9H061	195 aa		5.03	□□□□□ -1.6
LINC00943-206	ENST00000540250	TENM2	Q9NT68	2774 aa		5.03	□□□□□ -1.6
LINC00943-206	ENST00000540250		A0A087WTM6	91 aa		5.02	□□□□□ -1.61
LINC00943-206	ENST00000540250		H3BMG7	143 aa		5.02	□□□□□ -1.61
LINC00943-206	ENST00000540250	ATXN8	Q156A1	80 aa		5.02	□□□□□ -1.61
LINC00943-206	ENST00000540250	LINC01620	Q4KN68	170 aa		5.02	□□□□□ -1.61
LINC00943-206	ENST00000540250	NOTCH2NL	Q7Z3S9	236 aa		5.02	□□□□□ -1.61
LINC00943-206	ENST00000540250		Q8N814	137 aa		5.02	□□□□□ -1.61
LINC00943-206	ENST00000540250	PKIG	Q9Y2B9	76 aa		5.02	□□□□□ -1.61
LINC00943-206	ENST00000540250	PLEC	Q15149	4684 aa	Known RBP	5.02	□□□□□ -1.61
LINC00943-206	ENST00000540250		M0R378	163 aa		5.01	□□□□□ -1.61
LINC00943-206	ENST00000540250	LST1	O00453	97 aa		5.01	□□□□□ -1.61
LINC00943-206	ENST00000540250	IGLV6-57	P01721	117 aa		5.01	□□□□□ -1.61
LINC00943-206	ENST00000540250	CLEC2B	Q92478	149 aa		5.01	□□□□□ -1.61
LINC00943-206	ENST00000540250		A0A087X002	238 aa		5	□□□□□ -1.61
LINC00943-206	ENST00000540250	TRBV10-3	A0A0K0K1G6	114 aa		5	□□□□□ -1.61
LINC00943-206	ENST00000540250	C16orf90	A8MZG2	172 aa		5	□□□□□ -1.61
LINC00943-206	ENST00000540250	C9orf163	Q8N9P6	203 aa		5	□□□□□ -1.61
LINC00943-206	ENST00000540250	NKAPP1	Q8N9T2	125 aa		5	□□□□□ -1.61
LINC00943-206	ENST00000540250	ALMS1	Q8TCU4	4167 aa		5	□□□□□ -1.61
LINC00943-206	ENST00000540250	TRAV23DV6	A0A075B6W5	121 aa		4.99	□□□□□ -1.61
LINC00943-206	ENST00000540250		A0A096LNI7	61 aa		4.99	□□□□□ -1.61
LINC00943-206	ENST00000540250		F8W1H4	67 aa		4.99	□□□□□ -1.61
LINC00943-206	ENST00000540250		H0YGX0	51 aa		4.99	□□□□□ -1.61
LINC00943-206	ENST00000540250	SEC61G	P60059	68 aa		4.99	□□□□□ -1.61
LINC00943-206	ENST00000540250	PRO0461	Q9UI25	63 aa		4.99	□□□□□ -1.61
LINC00943-206	ENST00000540250	CBY1	Q9Y3M2	126 aa		4.99	□□□□□ -1.61
LINC00943-206	ENST00000540250	VPS13D	Q5THJ4	4388 aa		4.99	□□□□□ -1.61
LINC00943-206	ENST00000540250	TG	P01266	2768 aa		4.98	□□□□□ -1.61
LINC00943-206	ENST00000540250	FAM168B	A1KXE4	195 aa		4.98	□□□□□ -1.61
LINC00943-206	ENST00000540250		C9JAW5	83 aa		4.98	□□□□□ -1.61
LINC00943-206	ENST00000540250	TRAC	P01848	142 aa		4.98	□□□□□ -1.61
LINC00943-206	ENST00000540250	MTURN	Q8N3F0	131 aa		4.98	□□□□□ -1.61
LINC00943-206	ENST00000540250	DNAH6	Q9C0G6	4158 aa		4.98	□□□□□ -1.61
LINC00943-206	ENST00000540250	IGLV7-46	A0A075B6I9	117 aa		4.97	□□□□□ -1.61
LINC00943-206	ENST00000540250	IGKV2-24	A0A0C4DH68	120 aa		4.97	□□□□□ -1.61
LINC00943-206	ENST00000540250	C6orf99	Q4VX62	202 aa		4.97	□□□□□ -1.61
LINC00943-206	ENST00000540250	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.97	□□□□□ -1.61
LINC00943-206	ENST00000540250	C7orf33	Q8WU49	177 aa		4.97	□□□□□ -1.61
LINC00943-206	ENST00000540250	DIRC1	Q969H9	104 aa		4.97	□□□□□ -1.61
LINC00943-206	ENST00000540250	RTL8C	O15255	209 aa		4.96	□□□□□ -1.62
LINC00943-206	ENST00000540250	SLC25A20	O43772	301 aa		4.96	□□□□□ -1.62
LINC00943-206	ENST00000540250	ZNF73	O43830	326 aa	Predicted RBP	4.96	□□□□□ -1.62
LINC00943-206	ENST00000540250	SDIM1	Q6ZPB5	146 aa		4.96	□□□□□ -1.62
LINC00943-206	ENST00000540250	MRPL55	Q7Z7F7	128 aa	Known RBP	4.96	□□□□□ -1.62
LINC00943-206	ENST00000540250	KRTAP7-1	Q8IUC3	87 aa		4.96	□□□□□ -1.62
LINC00943-206	ENST00000540250	LINC00474	Q9P2X8	69 aa		4.96	□□□□□ -1.62
LINC00943-206	ENST00000540250	C22orf24	Q9Y442	160 aa		4.96	□□□□□ -1.62
LINC00943-206	ENST00000540250	TRBV7-6	A0A0J9YX20	115 aa		4.95	□□□□□ -1.62
LINC00943-206	ENST00000540250		A0A1B0GX51	115 aa		4.95	□□□□□ -1.62
LINC00943-206	ENST00000540250		H3BT86	120 aa		4.95	□□□□□ -1.62
LINC00943-206	ENST00000540250		M0QXV9	152 aa		4.95	□□□□□ -1.62
LINC00943-206	ENST00000540250	CHTF8	P0CG12	524 aa		4.95	□□□□□ -1.62
LINC00943-206	ENST00000540250	KCNQ1DN	Q9H478	68 aa		4.95	□□□□□ -1.62
LINC00943-206	ENST00000540250	IGLV1-50	A0A075B6I6	118 aa		4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250	LCE6A	A0A183	80 aa		4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250		A0A1W2PNN7	141 aa		4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250	DNAL4	O96015	105 aa		4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250	COX7B	P24311	80 aa		4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250	ELOF1	P60002	83 aa	Known RBP	4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250	KRTAP10-12	P60413	245 aa		4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250	ANKRD29	Q8N6D5	301 aa		4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250	LINC01600	Q96MT4	127 aa		4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250	LINC00167	Q96N53	147 aa		4.94	□□□□□ -1.62
LINC00943-206	ENST00000540250	RPL37AP8	A6NKH3	93 aa		4.93	□□□□□ -1.62
LINC00943-206	ENST00000540250	SNCG	O76070	127 aa		4.93	□□□□□ -1.62
LINC00943-206	ENST00000540250	LINC00575	Q6W349	94 aa		4.93	□□□□□ -1.62
LINC00943-206	ENST00000540250	DNAH10	Q8IVF4	4471 aa		4.92	□□□□□ -1.62
LINC00943-206	ENST00000540250	FUS	P35637	526 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
LINC00943-206	ENST00000540250	ETDB	Q3ZM63	59 aa		4.92	□□□□□ -1.62
LINC00943-206	ENST00000540250	TEN1	Q86WV5	123 aa		4.92	□□□□□ -1.62
LINC00943-206	ENST00000540250	SPACA4	Q8TDM5	124 aa		4.92	□□□□□ -1.62
LINC00943-206	ENST00000540250	KMT2A	Q03164	3969 aa		4.92	□□□□□ -1.62
LINC00943-206	ENST00000540250	hADV29S1	A0JD25	119 aa		4.91	□□□□□ -1.62
LINC00943-206	ENST00000540250	PANO1	I0J062	215 aa		4.91	□□□□□ -1.62
LINC00943-206	ENST00000540250	BAALC-AS2	P0C853	105 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms