RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 LINC01556Q5JQF7 62 aa3.94□□□□□ -1.78
CPSF7-219ENST00000539952 C9orf153Q5TBE3 101 aa3.94□□□□□ -1.78
CPSF7-219ENST00000539952 LINC01561Q8N1V8 128 aa3.94□□□□□ -1.78
CPSF7-219ENST00000539952 CHCHD5Q9BSY4 110 aa3.94□□□□□ -1.78
CPSF7-219ENST00000539952 TMEM243Q9BU79 118 aa3.94□□□□□ -1.78
CPSF7-219ENST00000539952 HMCN2Q8NDA2 5059 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 FAM236AA0A1B0GUQ0 79 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 FAM236BA0A1B0GV22 79 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 TRBV6-4A0A1B0GX49 114 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 JMJD7-PLA2G4BH0Y9G9 81 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 CRYGAP11844 174 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 COX6A2Q02221 97 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 Q6JHZ5 121 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 SMIM20Q8N5G0 67 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 COX7B2Q8TF08 81 aa3.93□□□□□ -1.78
CPSF7-219ENST00000539952 BCE1O60756 84 aa3.92□□□□□ -1.78
CPSF7-219ENST00000539952 RNASE13Q5GAN3 156 aaKnown RBP3.92□□□□□ -1.78
CPSF7-219ENST00000539952 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
CPSF7-219ENST00000539952 OBSCN-AS1Q96MR7 158 aa3.92□□□□□ -1.78
CPSF7-219ENST00000539952 SND1-IT1Q9HBX3 110 aa3.92□□□□□ -1.78
CPSF7-219ENST00000539952 TRAV13-1A0A0B4J241 112 aa3.91□□□□□ -1.78
CPSF7-219ENST00000539952 TRBV10-3A0A0K0K1G6 114 aa3.91□□□□□ -1.78
CPSF7-219ENST00000539952 J3KT08 172 aa3.91□□□□□ -1.78
CPSF7-219ENST00000539952 LINC00158P58513 81 aa3.91□□□□□ -1.78
CPSF7-219ENST00000539952 KRTAP10-4P60372 401 aaPredicted RBP3.91□□□□□ -1.78
CPSF7-219ENST00000539952 HIST1H4AP62805 103 aaKnown RBP3.91□□□□□ -1.78
CPSF7-219ENST00000539952 ATP5EP2Q5VTU8 51 aa3.91□□□□□ -1.78
CPSF7-219ENST00000539952 GAGE2AQ6NT46 116 aa3.91□□□□□ -1.78
CPSF7-219ENST00000539952 SCXQ7RTU7 201 aa3.91□□□□□ -1.78
CPSF7-219ENST00000539952 Q9HAA7 133 aa3.91□□□□□ -1.78
CPSF7-219ENST00000539952 ORMDL1Q9P0S3 153 aa3.91□□□□□ -1.78
CPSF7-219ENST00000539952 A0A087WZ39 114 aa3.9□□□□□ -1.79
CPSF7-219ENST00000539952 TMEM256-PLSCR3K7ERE1 68 aa3.9□□□□□ -1.79
CPSF7-219ENST00000539952 NDUFC2O95298 119 aa3.9□□□□□ -1.79
CPSF7-219ENST00000539952 RPL18AQ02543 176 aaKnown RBP3.9□□□□□ -1.79
CPSF7-219ENST00000539952 COX17Q14061 63 aa3.9□□□□□ -1.79
CPSF7-219ENST00000539952 SOSTDC1Q6X4U4 206 aa3.9□□□□□ -1.79
CPSF7-219ENST00000539952 NTM-AS1Q6ZSK4 140 aa3.9□□□□□ -1.79
CPSF7-219ENST00000539952 OR13C6PQ8NH95 151 aa3.9□□□□□ -1.79
CPSF7-219ENST00000539952 CIRBP-AS1Q8TBR5 109 aa3.9□□□□□ -1.79
CPSF7-219ENST00000539952 LRP1Q07954 4544 aaKnown RBP3.89□□□□□ -1.79
CPSF7-219ENST00000539952 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 A0A1B0GUV1 79 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 NDUFC2-KCTD14E9PQ53 114 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 CCKP06307 115 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 TMEM258P61165 79 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 SS18Q15532 418 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 C6orf226Q5I0X4 101 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 LELP1Q5T871 98 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 Q6ZRU5 148 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 MIR7-3HGQ8N6C7 128 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 SERP2Q8N6R1 65 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 KRTAP3-1Q9BYR8 98 aa3.89□□□□□ -1.79
CPSF7-219ENST00000539952 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.88□□□□□ -1.79
CPSF7-219ENST00000539952 TRBV6-8A0A0A6YYG3 113 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 IGHV3OR16-9A0A0B4J2B5 98 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 A0A0U1RRA0 63 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 hADV29S1A0JD25 119 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 LINC00694P0DN24 101 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 PDE6GP18545 87 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 RPL37AP61513 92 aaKnown RBP3.88□□□□□ -1.79
CPSF7-219ENST00000539952 Q8IZM0 81 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 LINC00337Q8N6G1 96 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 SMIM11BQ8TCY0 68 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 SMCR5Q8TEV8 140 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 RMI2Q96E14 147 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 LINC00167Q96N53 147 aa3.88□□□□□ -1.79
CPSF7-219ENST00000539952 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
CPSF7-219ENST00000539952 IGKV2D-28P01615 120 aa3.87□□□□□ -1.79
CPSF7-219ENST00000539952 C5orf47Q569G3 176 aa3.87□□□□□ -1.79
CPSF7-219ENST00000539952 C2orf48Q96LS8 159 aa3.87□□□□□ -1.79
CPSF7-219ENST00000539952 FAM218AQ96MZ4 157 aa3.87□□□□□ -1.79
CPSF7-219ENST00000539952 TOMM7Q9P0U1 55 aa3.87□□□□□ -1.79
CPSF7-219ENST00000539952 Q9UF83 564 aa3.87□□□□□ -1.79
CPSF7-219ENST00000539952 C22orf24Q9Y442 160 aa3.87□□□□□ -1.79
CPSF7-219ENST00000539952 DNAH8Q96JB1 4490 aa3.87□□□□□ -1.79
CPSF7-219ENST00000539952 LOC100131303A0A0U1RQF7 123 aa3.86□□□□□ -1.79
CPSF7-219ENST00000539952 LECT2O14960 151 aa3.86□□□□□ -1.79
CPSF7-219ENST00000539952 MT1HL1P0DM35 61 aa3.86□□□□□ -1.79
CPSF7-219ENST00000539952 C14orf177Q52M58 125 aa3.86□□□□□ -1.79
CPSF7-219ENST00000539952 UBL5Q9BZL1 73 aa3.86□□□□□ -1.79
CPSF7-219ENST00000539952 LINC00959A0A1B0GUT2 108 aa3.85□□□□□ -1.79
CPSF7-219ENST00000539952 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.79
CPSF7-219ENST00000539952 A0A087WYN8 130 aa3.84□□□□□ -1.79
CPSF7-219ENST00000539952 LOC107984640A0A0U1RRK4 108 aa3.84□□□□□ -1.79
CPSF7-219ENST00000539952 USP17L23D6RBM5 183 aa3.84□□□□□ -1.79
CPSF7-219ENST00000539952 C14orf132Q9NPU4 83 aa3.84□□□□□ -1.79
CPSF7-219ENST00000539952 LINC00846Q9NV44 126 aa3.84□□□□□ -1.79
CPSF7-219ENST00000539952 IGKV2D-24A0A075B6R9 120 aa3.83□□□□□ -1.8
CPSF7-219ENST00000539952 PFN2P35080 140 aa3.83□□□□□ -1.8
CPSF7-219ENST00000539952 RBM3P98179 157 aaKnown RBP3.83□□□□□ -1.8
CPSF7-219ENST00000539952 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
CPSF7-219ENST00000539952 CD164L2Q6UWJ8 174 aa3.83□□□□□ -1.8
CPSF7-219ENST00000539952 DPH3Q96FX2 82 aa3.83□□□□□ -1.8
CPSF7-219ENST00000539952 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
CPSF7-219ENST00000539952 LOC110117498A0A087WWA1 95 aa3.82□□□□□ -1.8
CPSF7-219ENST00000539952 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
CPSF7-219ENST00000539952 TRAV7A0A075B6U4 112 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms