RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 NDUFC2O95298 119 aa6.29□□□□□ -1.4
HMGA2-209ENST00000539662 IGLV6-57P01721 117 aa6.29□□□□□ -1.4
HMGA2-209ENST00000539662 S100A2P29034 98 aa6.29□□□□□ -1.4
HMGA2-209ENST00000539662 LINC00337Q8N6G1 96 aa6.29□□□□□ -1.4
HMGA2-209ENST00000539662 SMCR5Q8TEV8 140 aa6.29□□□□□ -1.4
HMGA2-209ENST00000539662 MIEN1Q9BRT3 115 aa6.29□□□□□ -1.4
HMGA2-209ENST00000539662 SPANXB1Q9NS25 103 aaPredicted RBP6.29□□□□□ -1.4
HMGA2-209ENST00000539662 C5orf52A6NGY3 159 aa6.28□□□□□ -1.4
HMGA2-209ENST00000539662 B5MCH6 92 aa6.28□□□□□ -1.4
HMGA2-209ENST00000539662 ERC2-IT1O76042 136 aa6.28□□□□□ -1.4
HMGA2-209ENST00000539662 S100A6P06703 90 aa6.28□□□□□ -1.4
HMGA2-209ENST00000539662 ETDCA0A1B0GVM5 59 aa6.27□□□□□ -1.41
HMGA2-209ENST00000539662 CRYGAP11844 174 aa6.27□□□□□ -1.41
HMGA2-209ENST00000539662 RPL13AP40429 203 aaKnown RBP6.27□□□□□ -1.41
HMGA2-209ENST00000539662 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
HMGA2-209ENST00000539662 C3orf22Q8N5N4 141 aa6.27□□□□□ -1.41
HMGA2-209ENST00000539662 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
HMGA2-209ENST00000539662 Q9BRP9 147 aa6.27□□□□□ -1.41
HMGA2-209ENST00000539662 TSPAN13O95857 204 aa6.26□□□□□ -1.41
HMGA2-209ENST00000539662 S100A7L2Q5SY68 101 aa6.26□□□□□ -1.41
HMGA2-209ENST00000539662 SCGB1D4Q6XE38 83 aa6.26□□□□□ -1.41
HMGA2-209ENST00000539662 TYMSOSQ8TAI1 123 aa6.26□□□□□ -1.41
HMGA2-209ENST00000539662 PPDPFQ9H3Y8 114 aa6.26□□□□□ -1.41
HMGA2-209ENST00000539662 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
HMGA2-209ENST00000539662 H3BS24 57 aa6.25□□□□□ -1.41
HMGA2-209ENST00000539662 FAM229BQ4G0N7 80 aa6.25□□□□□ -1.41
HMGA2-209ENST00000539662 SPANXDQ9BXN6 97 aa6.25□□□□□ -1.41
HMGA2-209ENST00000539662 SPANXCQ9NY87 97 aa6.25□□□□□ -1.41
HMGA2-209ENST00000539662 PCP4P48539 62 aa6.24□□□□□ -1.41
HMGA2-209ENST00000539662 MUSTN1Q8IVN3 82 aa6.24□□□□□ -1.41
HMGA2-209ENST00000539662 ZNF73O43830 326 aaPredicted RBP6.23□□□□□ -1.41
HMGA2-209ENST00000539662 Q6ZRX8 168 aa6.23□□□□□ -1.41
HMGA2-209ENST00000539662 OR13C6PQ8NH95 151 aa6.23□□□□□ -1.41
HMGA2-209ENST00000539662 GAGE2AQ6NT46 116 aa6.21□□□□□ -1.42
HMGA2-209ENST00000539662 ST20-AS1Q8NBB2 130 aa6.21□□□□□ -1.42
HMGA2-209ENST00000539662 S100A12P80511 92 aa6.2□□□□□ -1.42
HMGA2-209ENST00000539662 AKR1D1P51857 326 aa6.19□□□□□ -1.42
HMGA2-209ENST00000539662 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
HMGA2-209ENST00000539662 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
HMGA2-209ENST00000539662 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
HMGA2-209ENST00000539662 HSBP1L1C9JCN9 74 aa6.18□□□□□ -1.42
HMGA2-209ENST00000539662 IFITM1P13164 125 aa6.18□□□□□ -1.42
HMGA2-209ENST00000539662 PRR4Q16378 134 aa6.18□□□□□ -1.42
HMGA2-209ENST00000539662 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
HMGA2-209ENST00000539662 RNF213Q63HN8 5207 aa6.17□□□□□ -1.42
HMGA2-209ENST00000539662 C6orf99Q4VX62 202 aa6.17□□□□□ -1.42
HMGA2-209ENST00000539662 LINC00518Q8N0U6 118 aa6.17□□□□□ -1.42
HMGA2-209ENST00000539662 A6NDN8 102 aa6.16□□□□□ -1.42
HMGA2-209ENST00000539662 Q6ZVH6 145 aa6.16□□□□□ -1.42
HMGA2-209ENST00000539662 Q8NBF4 154 aa6.16□□□□□ -1.42
HMGA2-209ENST00000539662 C14orf144Q96I85 54 aa6.16□□□□□ -1.42
HMGA2-209ENST00000539662 IGLV9-49A0A0B4J1Y8 123 aa6.15□□□□□ -1.42
HMGA2-209ENST00000539662 COX8AP10176 69 aa6.15□□□□□ -1.42
HMGA2-209ENST00000539662 ELOF1P60002 83 aaKnown RBP6.15□□□□□ -1.42
HMGA2-209ENST00000539662 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
HMGA2-209ENST00000539662 COX7BP24311 80 aa6.14□□□□□ -1.43
HMGA2-209ENST00000539662 MOBPQ13875 183 aa6.14□□□□□ -1.43
HMGA2-209ENST00000539662 JOSD1Q15040 202 aaPredicted RBP6.14□□□□□ -1.43
HMGA2-209ENST00000539662 SPATA45Q537H7 98 aa6.13□□□□□ -1.43
HMGA2-209ENST00000539662 SMIM11BQ8TCY0 68 aa6.13□□□□□ -1.43
HMGA2-209ENST00000539662 C12orf57Q99622 126 aa6.13□□□□□ -1.43
HMGA2-209ENST00000539662 HINT1P49773 126 aaPredicted RBP6.12□□□□□ -1.43
HMGA2-209ENST00000539662 COPS9Q8WXC6 57 aa6.12□□□□□ -1.43
HMGA2-209ENST00000539662 PYY3Q5JQD4 70 aa6.11□□□□□ -1.43
HMGA2-209ENST00000539662 C2orf91Q6ZV80 131 aa6.11□□□□□ -1.43
HMGA2-209ENST00000539662 TRAV13-2A0A0B4J235 113 aa6.1□□□□□ -1.43
HMGA2-209ENST00000539662 DLEU1O43261 78 aa6.1□□□□□ -1.43
HMGA2-209ENST00000539662 SPRR1BP22528 89 aa6.1□□□□□ -1.43
HMGA2-209ENST00000539662 LINC01547P58512 204 aaPredicted RBP6.1□□□□□ -1.43
HMGA2-209ENST00000539662 DEFB105AQ8NG35 78 aa6.1□□□□□ -1.43
HMGA2-209ENST00000539662 HIST1H4GQ99525 98 aa6.1□□□□□ -1.43
HMGA2-209ENST00000539662 DHRS4-AS1Q9P1J3 65 aa6.1□□□□□ -1.43
HMGA2-209ENST00000539662 CBY1Q9Y3M2 126 aa6.1□□□□□ -1.43
HMGA2-209ENST00000539662 TRBV7-6A0A0J9YX20 115 aa6.09□□□□□ -1.43
HMGA2-209ENST00000539662 C9orf153Q5TBE3 101 aa6.09□□□□□ -1.43
HMGA2-209ENST00000539662 VAMP8Q9BV40 100 aa6.09□□□□□ -1.43
HMGA2-209ENST00000539662 A0A1B0GWB2 263 aa6.08□□□□□ -1.44
HMGA2-209ENST00000539662 SSBP3-AS1Q7Z2R9 100 aa6.08□□□□□ -1.44
HMGA2-209ENST00000539662 SMIM29Q86T20 159 aa6.08□□□□□ -1.44
HMGA2-209ENST00000539662 A0A0G2JQZ4 141 aa6.07□□□□□ -1.44
HMGA2-209ENST00000539662 Q1RN00 199 aa6.07□□□□□ -1.44
HMGA2-209ENST00000539662 LCE2CQ5TA81 110 aa6.07□□□□□ -1.44
HMGA2-209ENST00000539662 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
HMGA2-209ENST00000539662 TAL2Q16559 108 aa6.06□□□□□ -1.44
HMGA2-209ENST00000539662 SLC25A34Q6PIV7 304 aa6.06□□□□□ -1.44
HMGA2-209ENST00000539662 HIGD1BQ9P298 99 aa6.06□□□□□ -1.44
HMGA2-209ENST00000539662 IGLV7-46A0A075B6I9 117 aa6.05□□□□□ -1.44
HMGA2-209ENST00000539662 CFC1BP0CG36 223 aa6.05□□□□□ -1.44
HMGA2-209ENST00000539662 CFC1P0CG37 223 aa6.05□□□□□ -1.44
HMGA2-209ENST00000539662 IGLV5-48A0A075B6I7 105 aa6.04□□□□□ -1.44
HMGA2-209ENST00000539662 H7C2G1 150 aa6.04□□□□□ -1.44
HMGA2-209ENST00000539662 SPINK1P00995 79 aa6.04□□□□□ -1.44
HMGA2-209ENST00000539662 HRCT1Q6UXD1 115 aa6.04□□□□□ -1.44
HMGA2-209ENST00000539662 LINC00575Q6W349 94 aa6.04□□□□□ -1.44
HMGA2-209ENST00000539662 Q8N377 158 aa6.04□□□□□ -1.44
HMGA2-209ENST00000539662 MUC2Q02817 5179 aa6.04□□□□□ -1.44
HMGA2-209ENST00000539662 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
HMGA2-209ENST00000539662 TEX49A0A1B0GTD5 131 aa6.03□□□□□ -1.44
HMGA2-209ENST00000539662 CTAG1AP78358 180 aa6.03□□□□□ -1.44
HMGA2-209ENST00000539662 LAMTOR3Q9UHA4 124 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms