RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 WWC2-AS2Q96NR7 200 aa4.37□□□□□ -1.71
LSAMP-207ENST00000539563 MYO9AB2RTY4 2548 aa4.37□□□□□ -1.71
LSAMP-207ENST00000539563 PIEZO1Q92508 2521 aa4.36□□□□□ -1.71
LSAMP-207ENST00000539563 A8MWP4 228 aa4.36□□□□□ -1.71
LSAMP-207ENST00000539563 CSNK1G2-AS1Q8NCQ2 148 aa4.36□□□□□ -1.71
LSAMP-207ENST00000539563 SMG1Q96Q15 3661 aaKnown RBP4.36□□□□□ -1.71
LSAMP-207ENST00000539563 ST20-AS1Q8NBB2 130 aa4.36□□□□□ -1.71
LSAMP-207ENST00000539563 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
LSAMP-207ENST00000539563 LOC101927531A0A1B0GV80 90 aa4.35□□□□□ -1.71
LSAMP-207ENST00000539563 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
LSAMP-207ENST00000539563 ERC2-IT1O76042 136 aa4.35□□□□□ -1.71
LSAMP-207ENST00000539563 ABCA12Q86UK0 2595 aa4.35□□□□□ -1.71
LSAMP-207ENST00000539563 Q96NJ1 140 aa4.34□□□□□ -1.71
LSAMP-207ENST00000539563 LITAFQ99732 161 aa4.34□□□□□ -1.71
LSAMP-207ENST00000539563 KCNQ1DNQ9H478 68 aa4.34□□□□□ -1.71
LSAMP-207ENST00000539563 ATP11AUNQ6ZP68 121 aa4.34□□□□□ -1.72
LSAMP-207ENST00000539563 MRPL34Q9BQ48 92 aaKnown RBP4.34□□□□□ -1.72
LSAMP-207ENST00000539563 IGLV1-50A0A075B6I6 118 aa4.33□□□□□ -1.72
LSAMP-207ENST00000539563 PLA2G2DQ9UNK4 145 aa4.33□□□□□ -1.72
LSAMP-207ENST00000539563 NBEAQ8NFP9 2946 aa4.33□□□□□ -1.72
LSAMP-207ENST00000539563 TM2D3Q9BRN9 247 aa4.33□□□□□ -1.72
LSAMP-207ENST00000539563 KALRNO60229 2985 aa4.33□□□□□ -1.72
LSAMP-207ENST00000539563 C19orf73Q9NVV2 129 aa4.32□□□□□ -1.72
LSAMP-207ENST00000539563 NCOR2Q9Y618 2525 aa4.32□□□□□ -1.72
LSAMP-207ENST00000539563 ITPR1Q14643 2758 aa4.32□□□□□ -1.72
LSAMP-207ENST00000539563 FAM168BA1KXE4 195 aa4.32□□□□□ -1.72
LSAMP-207ENST00000539563 PRR34Q9NV39 138 aa4.32□□□□□ -1.72
LSAMP-207ENST00000539563 NBPF19A0A087WUL8 3843 aa4.32□□□□□ -1.72
LSAMP-207ENST00000539563 SERTAD4-AS1Q5TG53 156 aa4.32□□□□□ -1.72
LSAMP-207ENST00000539563 TLX1NBP0CAT3 122 aa4.31□□□□□ -1.72
LSAMP-207ENST00000539563 SSBP3-AS1Q7Z2R9 100 aa4.31□□□□□ -1.72
LSAMP-207ENST00000539563 TLN2Q9Y4G6 2542 aa4.3□□□□□ -1.72
LSAMP-207ENST00000539563 BOD1L1Q8NFC6 3051 aa4.3□□□□□ -1.72
LSAMP-207ENST00000539563 LINC00528Q8N1L1 170 aa4.3□□□□□ -1.72
LSAMP-207ENST00000539563 ANKRD11Q6UB99 2663 aaPredicted RBP4.3□□□□□ -1.72
LSAMP-207ENST00000539563 K7EQZ3 153 aa4.3□□□□□ -1.72
LSAMP-207ENST00000539563 ATMQ13315 3056 aa4.3□□□□□ -1.72
LSAMP-207ENST00000539563 ZNF861PO60384 105 aa4.3□□□□□ -1.72
LSAMP-207ENST00000539563 C4orf26Q17RF5 130 aa4.3□□□□□ -1.72
LSAMP-207ENST00000539563 KRTAP10-11P60412 298 aa4.29□□□□□ -1.72
LSAMP-207ENST00000539563 DMXL2Q8TDJ6 3036 aa4.29□□□□□ -1.72
LSAMP-207ENST00000539563 C15orf56Q8N910 161 aa4.29□□□□□ -1.72
LSAMP-207ENST00000539563 CYP4F30PQ9H0H9 118 aa4.29□□□□□ -1.72
LSAMP-207ENST00000539563 K7EIL1 84 aa4.29□□□□□ -1.72
LSAMP-207ENST00000539563 VPS13CQ709C8 3753 aa4.28□□□□□ -1.72
LSAMP-207ENST00000539563 IGFL1Q6UW32 110 aa4.28□□□□□ -1.72
LSAMP-207ENST00000539563 USP9XQ93008 2570 aaPredicted RBP4.28□□□□□ -1.72
LSAMP-207ENST00000539563 A0A096LNT2 108 aa4.28□□□□□ -1.72
LSAMP-207ENST00000539563 LINC00612Q8N6U2 182 aa4.28□□□□□ -1.72
LSAMP-207ENST00000539563 PRR15Q8IV56 129 aa4.28□□□□□ -1.72
LSAMP-207ENST00000539563 Q8N377 158 aa4.28□□□□□ -1.72
LSAMP-207ENST00000539563 CR1P17927 2039 aa4.27□□□□□ -1.73
LSAMP-207ENST00000539563 COA5Q86WW8 74 aa4.27□□□□□ -1.73
LSAMP-207ENST00000539563 LINC00304Q8N9R0 145 aa4.27□□□□□ -1.73
LSAMP-207ENST00000539563 A0A1B0GVX0 72 aa4.27□□□□□ -1.73
LSAMP-207ENST00000539563 C8orf17Q9NRJ1 99 aa4.27□□□□□ -1.73
LSAMP-207ENST00000539563 DOPEY1Q5JWR5 2465 aa4.26□□□□□ -1.73
LSAMP-207ENST00000539563 J3QL48 77 aa4.26□□□□□ -1.73
LSAMP-207ENST00000539563 A0A087WTM6 91 aa4.26□□□□□ -1.73
LSAMP-207ENST00000539563 GIG44P09565 113 aaPredicted RBP4.26□□□□□ -1.73
LSAMP-207ENST00000539563 C9orf129Q5T035 196 aaKnown RBP4.26□□□□□ -1.73
LSAMP-207ENST00000539563 C9orf163Q8N9P6 203 aa4.25□□□□□ -1.73
LSAMP-207ENST00000539563 IGLV8-61A0A075B6I0 122 aa4.25□□□□□ -1.73
LSAMP-207ENST00000539563 UQCR11O14957 56 aa4.25□□□□□ -1.73
LSAMP-207ENST00000539563 KRTAP10-3P60369 221 aa4.25□□□□□ -1.73
LSAMP-207ENST00000539563 JMJD1CQ15652 2540 aa4.25□□□□□ -1.73
LSAMP-207ENST00000539563 LINC00336Q6ZUF6 198 aa4.24□□□□□ -1.73
LSAMP-207ENST00000539563 DSCR10P59022 87 aa4.24□□□□□ -1.73
LSAMP-207ENST00000539563 KLKP1Q107X0 134 aa4.23□□□□□ -1.73
LSAMP-207ENST00000539563 LINC01600Q96MT4 127 aa4.23□□□□□ -1.73
LSAMP-207ENST00000539563 MGAQ8IWI9 3026 aa4.23□□□□□ -1.73
LSAMP-207ENST00000539563 CNBPP62633 177 aaKnown RBP4.23□□□□□ -1.73
LSAMP-207ENST00000539563 IGLV7-43P04211 117 aa4.23□□□□□ -1.73
LSAMP-207ENST00000539563 F8P00451 2351 aa4.22□□□□□ -1.73
LSAMP-207ENST00000539563 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
LSAMP-207ENST00000539563 DCHS2Q6V1P9 2916 aa4.22□□□□□ -1.73
LSAMP-207ENST00000539563 SPTBN4Q9H254 2564 aa4.21□□□□□ -1.74
LSAMP-207ENST00000539563 ZNF575Q86XF7 245 aa4.21□□□□□ -1.74
LSAMP-207ENST00000539563 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
LSAMP-207ENST00000539563 EIF4EBP3O60516 100 aaPredicted RBP4.21□□□□□ -1.74
LSAMP-207ENST00000539563 OBSCN-AS1Q96MR7 158 aa4.21□□□□□ -1.74
LSAMP-207ENST00000539563 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
LSAMP-207ENST00000539563 MIR22HGQ0VDD5 57 aa4.2□□□□□ -1.74
LSAMP-207ENST00000539563 USP9YO00507 2555 aaPredicted RBP4.2□□□□□ -1.74
LSAMP-207ENST00000539563 APLNQ9ULZ1 77 aa4.2□□□□□ -1.74
LSAMP-207ENST00000539563 A0A1W2PNN7 141 aa4.2□□□□□ -1.74
LSAMP-207ENST00000539563 COX6B2Q6YFQ2 88 aa4.2□□□□□ -1.74
LSAMP-207ENST00000539563 PSORS1C2Q9UIG4 136 aa4.2□□□□□ -1.74
LSAMP-207ENST00000539563 KRTAP1-3Q8IUG1 177 aa4.2□□□□□ -1.74
LSAMP-207ENST00000539563 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
LSAMP-207ENST00000539563 CSMD1Q96PZ7 3565 aa4.19□□□□□ -1.74
LSAMP-207ENST00000539563 PKD1L2Q7Z442 2459 aa4.19□□□□□ -1.74
LSAMP-207ENST00000539563 A8MUN3 132 aa4.19□□□□□ -1.74
LSAMP-207ENST00000539563 SPANXA2-OT1Q8N9U9 137 aa4.19□□□□□ -1.74
LSAMP-207ENST00000539563 C9orf92A6NGG3 77 aa4.18□□□□□ -1.74
LSAMP-207ENST00000539563 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
LSAMP-207ENST00000539563 ZNF292O60281 2723 aa4.18□□□□□ -1.74
LSAMP-207ENST00000539563 SETD2Q9BYW2 2564 aaPredicted RBP4.16□□□□□ -1.74
LSAMP-207ENST00000539563 H7BZZ5 65 aa4.16□□□□□ -1.74
LSAMP-207ENST00000539563 CD164Q04900 197 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms