RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 KRTAP1-5Q9BYS1 174 aa5.9□□□□□ -1.46
GGA3-202ENST00000538886 SRRM2Q9UQ35 2752 aaKnown RBP5.9□□□□□ -1.46
GGA3-202ENST00000538886 A0A087WYN8 130 aa5.9□□□□□ -1.47
GGA3-202ENST00000538886 PSPHP1O15172 72 aa5.9□□□□□ -1.47
GGA3-202ENST00000538886 COX6A2Q02221 97 aa5.9□□□□□ -1.47
GGA3-202ENST00000538886 IBA57-AS1B1ANH7 110 aa5.89□□□□□ -1.47
GGA3-202ENST00000538886 UBE2BP63146 152 aa5.89□□□□□ -1.47
GGA3-202ENST00000538886 MRPS36P82909 103 aaKnown RBP5.89□□□□□ -1.47
GGA3-202ENST00000538886 C14orf177Q52M58 125 aa5.89□□□□□ -1.47
GGA3-202ENST00000538886 XAGE1AQ9HD64 81 aa5.89□□□□□ -1.47
GGA3-202ENST00000538886 TRAV7A0A075B6U4 112 aa5.89□□□□□ -1.47
GGA3-202ENST00000538886 CD164L2Q6UWJ8 174 aa5.89□□□□□ -1.47
GGA3-202ENST00000538886 LITAFQ99732 161 aa5.89□□□□□ -1.47
GGA3-202ENST00000538886 SND1-IT1Q9HBX3 110 aa5.89□□□□□ -1.47
GGA3-202ENST00000538886 C9orf129Q5T035 196 aaKnown RBP5.89□□□□□ -1.47
GGA3-202ENST00000538886 NDUFA1O15239 70 aa5.88□□□□□ -1.47
GGA3-202ENST00000538886 SYCNQ0VAF6 134 aa5.88□□□□□ -1.47
GGA3-202ENST00000538886 LINC01600Q96MT4 127 aa5.88□□□□□ -1.47
GGA3-202ENST00000538886 A0A1B0GUV1 79 aa5.87□□□□□ -1.47
GGA3-202ENST00000538886 C9orf116Q5BN46 136 aaPredicted RBP5.87□□□□□ -1.47
GGA3-202ENST00000538886 SMR3BP02814 79 aaPredicted RBP5.87□□□□□ -1.47
GGA3-202ENST00000538886 UNQ6190/PRO20217Q6UXQ8 127 aa5.86□□□□□ -1.47
GGA3-202ENST00000538886 LINC00242Q5T6M2 205 aa5.86□□□□□ -1.47
GGA3-202ENST00000538886 ATP5EP2Q5VTU8 51 aa5.86□□□□□ -1.47
GGA3-202ENST00000538886 H0YGX0 51 aa5.85□□□□□ -1.47
GGA3-202ENST00000538886 COX7B2Q8TF08 81 aa5.85□□□□□ -1.47
GGA3-202ENST00000538886 SMIM11BQ8TCY0 68 aa5.85□□□□□ -1.47
GGA3-202ENST00000538886 FLG2Q5D862 2391 aaPredicted RBP5.84□□□□□ -1.47
GGA3-202ENST00000538886 RTL8CO15255 209 aa5.84□□□□□ -1.47
GGA3-202ENST00000538886 PRR4Q16378 134 aa5.84□□□□□ -1.47
GGA3-202ENST00000538886 NKAPP1Q8N9T2 125 aa5.84□□□□□ -1.47
GGA3-202ENST00000538886 A0A087WTM6 91 aa5.84□□□□□ -1.47
GGA3-202ENST00000538886 CD164Q04900 197 aa5.84□□□□□ -1.47
GGA3-202ENST00000538886 CHTF8P0CG12 524 aa5.83□□□□□ -1.48
GGA3-202ENST00000538886 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
GGA3-202ENST00000538886 NDUFC1O43677 76 aa5.83□□□□□ -1.48
GGA3-202ENST00000538886 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
GGA3-202ENST00000538886 Q6ZRU5 148 aa5.81□□□□□ -1.48
GGA3-202ENST00000538886 FAM229BQ4G0N7 80 aa5.81□□□□□ -1.48
GGA3-202ENST00000538886 LINC00337Q8N6G1 96 aa5.81□□□□□ -1.48
GGA3-202ENST00000538886 TMEM254Q8TBM7 123 aa5.81□□□□□ -1.48
GGA3-202ENST00000538886 NREPQ16612 68 aa5.8□□□□□ -1.48
GGA3-202ENST00000538886 KLKP1Q107X0 134 aa5.79□□□□□ -1.48
GGA3-202ENST00000538886 HUWE1Q7Z6Z7 4374 aaKnown RBP5.78□□□□□ -1.48
GGA3-202ENST00000538886 C10orf25Q5T742 122 aa5.78□□□□□ -1.48
GGA3-202ENST00000538886 DMBT1Q9UGM3 2413 aaPredicted RBP5.78□□□□□ -1.48
GGA3-202ENST00000538886 IGHV3OR16-9A0A0B4J2B5 98 aa5.78□□□□□ -1.48
GGA3-202ENST00000538886 TMEM256-PLSCR3K7ERE1 68 aa5.78□□□□□ -1.48
GGA3-202ENST00000538886 KRTAP10-2P60368 255 aa5.78□□□□□ -1.48
GGA3-202ENST00000538886 Q8N814 137 aa5.78□□□□□ -1.48
GGA3-202ENST00000538886 IGKV2-28A0A075B6P5 120 aa5.78□□□□□ -1.48
GGA3-202ENST00000538886 RPL37AP8A6NKH3 93 aa5.78□□□□□ -1.48
GGA3-202ENST00000538886 IGKV2D-28P01615 120 aa5.78□□□□□ -1.48
GGA3-202ENST00000538886 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
GGA3-202ENST00000538886 DNAH9Q9NYC9 4486 aa5.77□□□□□ -1.49
GGA3-202ENST00000538886 J3QL48 77 aa5.77□□□□□ -1.49
GGA3-202ENST00000538886 PRR34Q9NV39 138 aa5.77□□□□□ -1.49
GGA3-202ENST00000538886 C22orf24Q9Y442 160 aa5.77□□□□□ -1.49
GGA3-202ENST00000538886 CSMD3Q7Z407 3707 aa5.77□□□□□ -1.49
GGA3-202ENST00000538886 PRYO14603 147 aa5.77□□□□□ -1.49
GGA3-202ENST00000538886 SMIM1B2RUZ4 78 aa5.76□□□□□ -1.49
GGA3-202ENST00000538886 C7orf33Q8WU49 177 aa5.76□□□□□ -1.49
GGA3-202ENST00000538886 BPY2O14599 106 aa5.76□□□□□ -1.49
GGA3-202ENST00000538886 CHKB-CPT1BH3BT56 60 aa5.76□□□□□ -1.49
GGA3-202ENST00000538886 Q6ZR54 194 aa5.76□□□□□ -1.49
GGA3-202ENST00000538886 Q8N9L7 120 aa5.75□□□□□ -1.49
GGA3-202ENST00000538886 Q6ZVQ6 151 aa5.74□□□□□ -1.49
GGA3-202ENST00000538886 PRR15Q8IV56 129 aa5.73□□□□□ -1.49
GGA3-202ENST00000538886 HIGD2AQ9BW72 106 aa5.73□□□□□ -1.49
GGA3-202ENST00000538886 RBM12B-AS1Q9P1G2 102 aa5.73□□□□□ -1.49
GGA3-202ENST00000538886 PRR3P79522 188 aaKnown RBP5.73□□□□□ -1.49
GGA3-202ENST00000538886 FAM19A3Q7Z5A8 133 aa5.73□□□□□ -1.49
GGA3-202ENST00000538886 C15orf56Q8N910 161 aa5.73□□□□□ -1.49
GGA3-202ENST00000538886 TRBV10-3A0A0K0K1G6 114 aa5.73□□□□□ -1.49
GGA3-202ENST00000538886 UBE2AP49459 152 aa5.73□□□□□ -1.49
GGA3-202ENST00000538886 Q8IZM0 81 aa5.72□□□□□ -1.49
GGA3-202ENST00000538886 C6orf48Q9UBA6 75 aa5.72□□□□□ -1.49
GGA3-202ENST00000538886 CMYA5Q8N3K9 4069 aa5.71□□□□□ -1.49
GGA3-202ENST00000538886 A0A096LNI7 61 aa5.71□□□□□ -1.49
GGA3-202ENST00000538886 A8MUN3 132 aa5.71□□□□□ -1.49
GGA3-202ENST00000538886 FAM229AH3BQW9 127 aa5.71□□□□□ -1.49
GGA3-202ENST00000538886 C6orf99Q4VX62 202 aa5.7□□□□□ -1.5
GGA3-202ENST00000538886 FAM168BA1KXE4 195 aa5.7□□□□□ -1.5
GGA3-202ENST00000538886 A6NED7 52 aa5.7□□□□□ -1.5
GGA3-202ENST00000538886 H3BS24 57 aa5.7□□□□□ -1.5
GGA3-202ENST00000538886 FAM30AQ9NZY2 134 aa5.7□□□□□ -1.5
GGA3-202ENST00000538886 C1orf137Q5JT78 98 aa5.7□□□□□ -1.5
GGA3-202ENST00000538886 FAM104AQ969W3 186 aa5.7□□□□□ -1.5
GGA3-202ENST00000538886 EPM2AB3EWF7 344 aa5.69□□□□□ -1.5
GGA3-202ENST00000538886 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
GGA3-202ENST00000538886 ETDCA0A1B0GVM5 59 aa5.69□□□□□ -1.5
GGA3-202ENST00000538886 C9orf163Q8N9P6 203 aa5.69□□□□□ -1.5
GGA3-202ENST00000538886 KRTAP10-1P60331 282 aa5.68□□□□□ -1.5
GGA3-202ENST00000538886 Q6ZRP5 223 aa5.68□□□□□ -1.5
GGA3-202ENST00000538886 DEFB105AQ8NG35 78 aa5.68□□□□□ -1.5
GGA3-202ENST00000538886 GVQW2A0A096LPI5 108 aaPredicted RBP5.68□□□□□ -1.5
GGA3-202ENST00000538886 IGLV5-39A0A0G2JS06 123 aa5.67□□□□□ -1.5
GGA3-202ENST00000538886 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
GGA3-202ENST00000538886 Q6ZQY7 126 aa5.67□□□□□ -1.5
GGA3-202ENST00000538886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms