RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 C7orf33Q8WU49 177 aa10.85□□□□□ -0.67
CLN6-202ENST00000538696 PLAC8Q9NZF1 115 aa10.85□□□□□ -0.67
CLN6-202ENST00000538696 CDK2AP2O75956 126 aa10.84□□□□□ -0.67
CLN6-202ENST00000538696 COX6CP09669 75 aa10.84□□□□□ -0.67
CLN6-202ENST00000538696 CLEC2BQ92478 149 aa10.84□□□□□ -0.67
CLN6-202ENST00000538696 DPH3Q96FX2 82 aa10.84□□□□□ -0.67
CLN6-202ENST00000538696 C22orf24Q9Y442 160 aa10.83□□□□□ -0.68
CLN6-202ENST00000538696 TRBV20-1A0A075B6N2 111 aa10.82□□□□□ -0.68
CLN6-202ENST00000538696 TRAV23DV6A0A075B6W5 121 aa10.82□□□□□ -0.68
CLN6-202ENST00000538696 EPM2AB3EWF7 344 aa10.82□□□□□ -0.68
CLN6-202ENST00000538696 H3BMG7 143 aa10.82□□□□□ -0.68
CLN6-202ENST00000538696 C6orf99Q4VX62 202 aa10.81□□□□□ -0.68
CLN6-202ENST00000538696 HSPG2P98160 4391 aa10.81□□□□□ -0.68
CLN6-202ENST00000538696 ATXN8Q156A1 80 aa10.8□□□□□ -0.68
CLN6-202ENST00000538696 FAM218AQ96MZ4 157 aa10.8□□□□□ -0.68
CLN6-202ENST00000538696 LINC00167Q96N53 147 aa10.8□□□□□ -0.68
CLN6-202ENST00000538696 M0QXV9 152 aa10.79□□□□□ -0.68
CLN6-202ENST00000538696 LST1O00453 97 aa10.79□□□□□ -0.68
CLN6-202ENST00000538696 MRPL55Q7Z7F7 128 aaKnown RBP10.78□□□□□ -0.68
CLN6-202ENST00000538696 MTURNQ8N3F0 131 aa10.78□□□□□ -0.68
CLN6-202ENST00000538696 RPL37AP8A6NKH3 93 aa10.77□□□□□ -0.69
CLN6-202ENST00000538696 PHF5AQ7RTV0 110 aaKnown RBP10.77□□□□□ -0.69
CLN6-202ENST00000538696 DIRC1Q969H9 104 aa10.77□□□□□ -0.69
CLN6-202ENST00000538696 H0YGX0 51 aa10.76□□□□□ -0.69
CLN6-202ENST00000538696 ZNF73O43830 326 aaPredicted RBP10.76□□□□□ -0.69
CLN6-202ENST00000538696 IGLV1-50A0A075B6I6 118 aa10.75□□□□□ -0.69
CLN6-202ENST00000538696 KCNQ1DNQ9H478 68 aa10.75□□□□□ -0.69
CLN6-202ENST00000538696 PRO0461Q9UI25 63 aa10.75□□□□□ -0.69
CLN6-202ENST00000538696 SMR3BP02814 79 aaPredicted RBP10.74□□□□□ -0.69
CLN6-202ENST00000538696 CBY1Q9Y3M2 126 aa10.74□□□□□ -0.69
CLN6-202ENST00000538696 PRYO14603 147 aa10.73□□□□□ -0.69
CLN6-202ENST00000538696 HERC2O95714 4834 aa10.73□□□□□ -0.69
CLN6-202ENST00000538696 C9JAW5 83 aa10.72□□□□□ -0.69
CLN6-202ENST00000538696 FAT1Q14517 4588 aa10.71□□□□□ -0.69
CLN6-202ENST00000538696 TRACP01848 142 aa10.71□□□□□ -0.69
CLN6-202ENST00000538696 COX7BP24311 80 aa10.71□□□□□ -0.69
CLN6-202ENST00000538696 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
CLN6-202ENST00000538696 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
CLN6-202ENST00000538696 KRTAP17-1Q9BYP8 105 aa10.71□□□□□ -0.69
CLN6-202ENST00000538696 KRTAP11-1Q8IUC1 163 aa10.7□□□□□ -0.7
CLN6-202ENST00000538696 TRBV7-6A0A0J9YX20 115 aa10.69□□□□□ -0.7
CLN6-202ENST00000538696 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
CLN6-202ENST00000538696 LINC00575Q6W349 94 aa10.69□□□□□ -0.7
CLN6-202ENST00000538696 SPRR1AP35321 89 aa10.68□□□□□ -0.7
CLN6-202ENST00000538696 F8W1H4 67 aa10.67□□□□□ -0.7
CLN6-202ENST00000538696 SLC25A20O43772 301 aa10.67□□□□□ -0.7
CLN6-202ENST00000538696 UBE2BP63146 152 aa10.67□□□□□ -0.7
CLN6-202ENST00000538696 KRTAP4-16G5E9R7 235 aaPredicted RBP10.66□□□□□ -0.7
CLN6-202ENST00000538696 A0A1B0GX51 115 aa10.65□□□□□ -0.7
CLN6-202ENST00000538696 REG3GQ6UW15 175 aa10.65□□□□□ -0.7
CLN6-202ENST00000538696 Q8N1X5 172 aa10.64□□□□□ -0.71
CLN6-202ENST00000538696 ETDCA0A1B0GVM5 59 aa10.63□□□□□ -0.71
CLN6-202ENST00000538696 B5MCH6 92 aa10.63□□□□□ -0.71
CLN6-202ENST00000538696 DNAL4O96015 105 aa10.63□□□□□ -0.71
CLN6-202ENST00000538696 RPL37AP61513 92 aaKnown RBP10.63□□□□□ -0.71
CLN6-202ENST00000538696 hADV29S1A0JD25 119 aa10.62□□□□□ -0.71
CLN6-202ENST00000538696 H3BT86 120 aa10.62□□□□□ -0.71
CLN6-202ENST00000538696 Q5VSD8 79 aa10.62□□□□□ -0.71
CLN6-202ENST00000538696 PSORS1C2Q9UIG4 136 aa10.62□□□□□ -0.71
CLN6-202ENST00000538696 KRTAP10-4P60372 401 aaPredicted RBP10.61□□□□□ -0.71
CLN6-202ENST00000538696 ANKRD29Q8N6D5 301 aa10.61□□□□□ -0.71
CLN6-202ENST00000538696 VPS13BQ7Z7G8 4022 aa10.6□□□□□ -0.71
CLN6-202ENST00000538696 FAM229AH3BQW9 127 aa10.6□□□□□ -0.71
CLN6-202ENST00000538696 Q6ZRX8 168 aa10.6□□□□□ -0.71
CLN6-202ENST00000538696 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
CLN6-202ENST00000538696 BAALC-AS2P0C853 105 aa10.59□□□□□ -0.71
CLN6-202ENST00000538696 SNCGO76070 127 aa10.58□□□□□ -0.71
CLN6-202ENST00000538696 FAM19A1Q7Z5A9 133 aa10.58□□□□□ -0.71
CLN6-202ENST00000538696 Q9BRP9 147 aa10.58□□□□□ -0.71
CLN6-202ENST00000538696 PLA2G1BP04054 148 aaKnown RBP10.58□□□□□ -0.72
CLN6-202ENST00000538696 ETDBQ3ZM63 59 aa10.58□□□□□ -0.72
CLN6-202ENST00000538696 C1orf137Q5JT78 98 aa10.58□□□□□ -0.72
CLN6-202ENST00000538696 ORMDL1Q9P0S3 153 aa10.58□□□□□ -0.72
CLN6-202ENST00000538696 Q6ZQY7 126 aa10.57□□□□□ -0.72
CLN6-202ENST00000538696 INAFM2P0DMQ5 153 aa10.56□□□□□ -0.72
CLN6-202ENST00000538696 PRLHP81277 87 aa10.56□□□□□ -0.72
CLN6-202ENST00000538696 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.55□□□□□ -0.72
CLN6-202ENST00000538696 TEN1Q86WV5 123 aa10.55□□□□□ -0.72
CLN6-202ENST00000538696 DHRS4-AS1Q9P1J3 65 aa10.55□□□□□ -0.72
CLN6-202ENST00000538696 BCE1O60756 84 aa10.54□□□□□ -0.72
CLN6-202ENST00000538696 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
CLN6-202ENST00000538696 KRTAP4-5Q9BYR2 181 aa10.54□□□□□ -0.72
CLN6-202ENST00000538696 PKHD1L1Q86WI1 4243 aa10.53□□□□□ -0.72
CLN6-202ENST00000538696 ERC2-IT1O76042 136 aa10.53□□□□□ -0.72
CLN6-202ENST00000538696 IGLV7-43P04211 117 aa10.52□□□□□ -0.73
CLN6-202ENST00000538696 UBE2AP49459 152 aa10.51□□□□□ -0.73
CLN6-202ENST00000538696 ABCA13Q86UQ4 5058 aa10.5□□□□□ -0.73
CLN6-202ENST00000538696 KRTAP13-1Q8IUC0 172 aa10.49□□□□□ -0.73
CLN6-202ENST00000538696 ST20-AS1Q8NBB2 130 aa10.49□□□□□ -0.73
CLN6-202ENST00000538696 H0Y9J4 135 aa10.48□□□□□ -0.73
CLN6-202ENST00000538696 PPDPFLQ8WWR9 84 aa10.48□□□□□ -0.73
CLN6-202ENST00000538696 HIGD2AQ9BW72 106 aa10.48□□□□□ -0.73
CLN6-202ENST00000538696 TEX49A0A1B0GTD5 131 aa10.47□□□□□ -0.73
CLN6-202ENST00000538696 TMEM256-PLSCR3K7ERE1 68 aa10.47□□□□□ -0.73
CLN6-202ENST00000538696 LINC01547P58512 204 aaPredicted RBP10.47□□□□□ -0.73
CLN6-202ENST00000538696 OCIAD2Q56VL3 154 aa10.47□□□□□ -0.73
CLN6-202ENST00000538696 A0A1B0GV72 72 aa10.45□□□□□ -0.74
CLN6-202ENST00000538696 H3BQ85 93 aa10.45□□□□□ -0.74
CLN6-202ENST00000538696 ZNF861PO60384 105 aa10.45□□□□□ -0.74
CLN6-202ENST00000538696 DEFB105AQ8NG35 78 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms