RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 COX7CP15954 63 aa16.17■□□□□ 0.18
RAB40C-204ENST00000538492 KCNQ1DNQ9H478 68 aa16.16■□□□□ 0.18
RAB40C-204ENST00000538492 TLX1NBP0CAT3 122 aa16.16■□□□□ 0.18
RAB40C-204ENST00000538492 PDE6GP18545 87 aa16.16■□□□□ 0.18
RAB40C-204ENST00000538492 TRBV7-4A0A0J9YYF1 115 aa16.15■□□□□ 0.18
RAB40C-204ENST00000538492 RPL37AP8A6NKH3 93 aa16.15■□□□□ 0.18
RAB40C-204ENST00000538492 COL7A1Q02388 2944 aa16.15■□□□□ 0.18
RAB40C-204ENST00000538492 Q6ZVQ6 151 aa16.13■□□□□ 0.17
RAB40C-204ENST00000538492 HAMPP81172 84 aa16.13■□□□□ 0.17
RAB40C-204ENST00000538492 RMI2Q96E14 147 aa16.12■□□□□ 0.17
RAB40C-204ENST00000538492 UPK3BQ9BT76 320 aa16.11■□□□□ 0.17
RAB40C-204ENST00000538492 STAB2Q8WWQ8 2551 aa16.11■□□□□ 0.17
RAB40C-204ENST00000538492 LINC01547P58512 204 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-204ENST00000538492 DEFB105AQ8NG35 78 aa16.1■□□□□ 0.17
RAB40C-204ENST00000538492 PLA2G2DQ9UNK4 145 aa16.08■□□□□ 0.16
RAB40C-204ENST00000538492 KRTAP7-1Q8IUC3 87 aa16.07■□□□□ 0.16
RAB40C-204ENST00000538492 SERP2Q8N6R1 65 aa16.06■□□□□ 0.16
RAB40C-204ENST00000538492 FAM19A5Q7Z5A7 132 aaPredicted RBP16.05■□□□□ 0.16
RAB40C-204ENST00000538492 DNAH10Q8IVF4 4471 aa16.05■□□□□ 0.16
RAB40C-204ENST00000538492 IGLV1-50A0A075B6I6 118 aa16.04■□□□□ 0.16
RAB40C-204ENST00000538492 KRTAP1-5Q9BYS1 174 aa16.03■□□□□ 0.16
RAB40C-204ENST00000538492 Q6ZRX8 168 aa16.02■□□□□ 0.15
RAB40C-204ENST00000538492 Q8N377 158 aa16.01■□□□□ 0.15
RAB40C-204ENST00000538492 IGLV5-37A0A075B6J1 123 aa16.01■□□□□ 0.15
RAB40C-204ENST00000538492 CRYGAP11844 174 aa16.01■□□□□ 0.15
RAB40C-204ENST00000538492 Q9BRP9 147 aa16.01■□□□□ 0.15
RAB40C-204ENST00000538492 SCXQ7RTU7 201 aa16■□□□□ 0.15
RAB40C-204ENST00000538492 KRTAP4-16G5E9R7 235 aaPredicted RBP16■□□□□ 0.15
RAB40C-204ENST00000538492 CYSTM1Q9H1C7 97 aa16■□□□□ 0.15
RAB40C-204ENST00000538492 LOC107984640A0A0U1RRK4 108 aa15.99■□□□□ 0.15
RAB40C-204ENST00000538492 ETDCA0A1B0GVM5 59 aa15.99■□□□□ 0.15
RAB40C-204ENST00000538492 PRYO14603 147 aa15.99■□□□□ 0.15
RAB40C-204ENST00000538492 MRPL55Q7Z7F7 128 aaKnown RBP15.98■□□□□ 0.15
RAB40C-204ENST00000538492 DHRS4-AS1Q9P1J3 65 aa15.97■□□□□ 0.15
RAB40C-204ENST00000538492 DNAH9Q9NYC9 4486 aa15.96■□□□□ 0.15
RAB40C-204ENST00000538492 CXCL6P80162 114 aa15.96■□□□□ 0.15
RAB40C-204ENST00000538492 SPRR1AP35321 89 aa15.95■□□□□ 0.14
RAB40C-204ENST00000538492 ST20-AS1Q8NBB2 130 aa15.94■□□□□ 0.14
RAB40C-204ENST00000538492 TENM2Q9NT68 2774 aa15.94■□□□□ 0.14
RAB40C-204ENST00000538492 SMIM20Q8N5G0 67 aa15.93■□□□□ 0.14
RAB40C-204ENST00000538492 UBE2DNLQ8IWF7 75 aa15.92■□□□□ 0.14
RAB40C-204ENST00000538492 PSCAO43653 123 aa15.91■□□□□ 0.14
RAB40C-204ENST00000538492 C3orf84H3BNL1 204 aa15.9■□□□□ 0.14
RAB40C-204ENST00000538492 IGKV2-24A0A0C4DH68 120 aa15.9■□□□□ 0.14
RAB40C-204ENST00000538492 CSMD3Q7Z407 3707 aa15.9■□□□□ 0.14
RAB40C-204ENST00000538492 DNAH7Q8WXX0 4024 aa15.9■□□□□ 0.14
RAB40C-204ENST00000538492 ERC2-IT1O76042 136 aa15.89■□□□□ 0.13
RAB40C-204ENST00000538492 A0A096LNI7 61 aa15.88■□□□□ 0.13
RAB40C-204ENST00000538492 UBE2BP63146 152 aa15.88■□□□□ 0.13
RAB40C-204ENST00000538492 IGLV5-48A0A075B6I7 105 aa15.87■□□□□ 0.13
RAB40C-204ENST00000538492 APLNQ9ULZ1 77 aa15.87■□□□□ 0.13
RAB40C-204ENST00000538492 MDFIQ99750 246 aa15.86■□□□□ 0.13
RAB40C-204ENST00000538492 REG3GQ6UW15 175 aa15.85■□□□□ 0.13
RAB40C-204ENST00000538492 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.85■□□□□ 0.13
RAB40C-204ENST00000538492 NREPQ16612 68 aa15.83■□□□□ 0.13
RAB40C-204ENST00000538492 Q8N9L7 120 aa15.83■□□□□ 0.12
RAB40C-204ENST00000538492 A0A1W2PNN7 141 aa15.81■□□□□ 0.12
RAB40C-204ENST00000538492 C16orf90A8MZG2 172 aa15.81■□□□□ 0.12
RAB40C-204ENST00000538492 CNBPP62633 177 aaKnown RBP15.81■□□□□ 0.12
RAB40C-204ENST00000538492 C1orf137Q5JT78 98 aa15.79■□□□□ 0.12
RAB40C-204ENST00000538492 TNP2Q05952 138 aa15.79■□□□□ 0.12
RAB40C-204ENST00000538492 C20orf197Q8N268 126 aa15.78■□□□□ 0.12
RAB40C-204ENST00000538492 A0A1W2PNM2 257 aa15.78■□□□□ 0.12
RAB40C-204ENST00000538492 FUSP35637 526 aaKnown RBP eCLIP15.77■□□□□ 0.112e-6■■■□□ 19.1
RAB40C-204ENST00000538492 B9D2Q9BPU9 175 aa15.77■□□□□ 0.11
RAB40C-204ENST00000538492 TRAV7A0A075B6U4 112 aa15.75■□□□□ 0.11
RAB40C-204ENST00000538492 PRLHP81277 87 aa15.75■□□□□ 0.11
RAB40C-204ENST00000538492 DYNC2H1Q8NCM8 4307 aaKnown RBP15.75■□□□□ 0.11
RAB40C-204ENST00000538492 PLECQ15149 4684 aaKnown RBP15.75■□□□□ 0.11
RAB40C-204ENST00000538492 CHTF8P0CG12 524 aa15.74■□□□□ 0.11
RAB40C-204ENST00000538492 BCE1O60756 84 aa15.73■□□□□ 0.11
RAB40C-204ENST00000538492 BPY2O14599 106 aa15.73■□□□□ 0.11
RAB40C-204ENST00000538492 IGKV4-1P06312 121 aa15.71■□□□□ 0.11
RAB40C-204ENST00000538492 TMEM258P61165 79 aa15.71■□□□□ 0.11
RAB40C-204ENST00000538492 Q8NBF4 154 aa15.69■□□□□ 0.1
RAB40C-204ENST00000538492 SMIM29Q86T20 159 aa15.69■□□□□ 0.1
RAB40C-204ENST00000538492 C14orf177Q52M58 125 aa15.68■□□□□ 0.1
RAB40C-204ENST00000538492 HIGD2AQ9BW72 106 aa15.67■□□□□ 0.1
RAB40C-204ENST00000538492 PHF5AQ7RTV0 110 aaKnown RBP15.67■□□□□ 0.1
RAB40C-204ENST00000538492 A0A0G2JQZ4 141 aa15.66■□□□□ 0.1
RAB40C-204ENST00000538492 KRTAP11-1Q8IUC1 163 aa15.65■□□□□ 0.1
RAB40C-204ENST00000538492 SRRM2Q9UQ35 2752 aaKnown RBP15.64■□□□□ 0.09
RAB40C-204ENST00000538492 LINC00476Q8WZB0 136 aa15.64■□□□□ 0.09
RAB40C-204ENST00000538492 NBDYA0A0U1RRE5 68 aa15.63■□□□□ 0.09
RAB40C-204ENST00000538492 A0A1B0GW54 56 aa15.62■□□□□ 0.09
RAB40C-204ENST00000538492 LRCOL1A6NCL2 159 aa15.62■□□□□ 0.09
RAB40C-204ENST00000538492 SPRR4Q96PI1 79 aa15.62■□□□□ 0.09
RAB40C-204ENST00000538492 SNURFQ9Y675 71 aa15.62■□□□□ 0.09
RAB40C-204ENST00000538492 F8WEM9 126 aa15.62■□□□□ 0.09
RAB40C-204ENST00000538492 J3KT08 172 aa15.6■□□□□ 0.09
RAB40C-204ENST00000538492 C9orf163Q8N9P6 203 aa15.59■□□□□ 0.09
RAB40C-204ENST00000538492 NUPR2A6NF83 97 aa15.59■□□□□ 0.09
RAB40C-204ENST00000538492 DPH3Q96FX2 82 aa15.59■□□□□ 0.09
RAB40C-204ENST00000538492 STARD9Q9P2P6 4700 aa15.57■□□□□ 0.08
RAB40C-204ENST00000538492 IGFL1Q6UW32 110 aa15.56■□□□□ 0.08
RAB40C-204ENST00000538492 KLKP1Q107X0 134 aa15.55■□□□□ 0.08
RAB40C-204ENST00000538492 EPM2AB3EWF7 344 aa15.54■□□□□ 0.08
RAB40C-204ENST00000538492 Q6ZRN7 208 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-204ENST00000538492 H7BZZ5 65 aa15.54■□□□□ 0.08
RAB40C-204ENST00000538492 PANO1I0J062 215 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms