RNA–Protein interactions for RNA: ENST00000537750.5

SYNE1-236, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-236ENST00000537750 C1orf195Q5TG92 126 aa9.82□□□□□ -0.84
SYNE1-236ENST00000537750 PKD1L1Q8TDX9 2849 aa9.82□□□□□ -0.84
SYNE1-236ENST00000537750 Q8N377 158 aa9.8□□□□□ -0.84
SYNE1-236ENST00000537750 EGFEM1PQ0D2K5 195 aa9.79□□□□□ -0.84
SYNE1-236ENST00000537750 Q6ZRP5 223 aa9.78□□□□□ -0.84
SYNE1-236ENST00000537750 KPRPQ5T749 579 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-236ENST00000537750 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
SYNE1-236ENST00000537750 Q8NAQ8 132 aa9.78□□□□□ -0.84
SYNE1-236ENST00000537750 TENM1Q9UKZ4 2725 aa9.78□□□□□ -0.84
SYNE1-236ENST00000537750 ITPR2Q14571 2701 aa9.77□□□□□ -0.84
SYNE1-236ENST00000537750 A0A1W2PNM2 257 aa9.76□□□□□ -0.85
SYNE1-236ENST00000537750 KRTAP1-1Q07627 177 aa9.76□□□□□ -0.85
SYNE1-236ENST00000537750 C15orf56Q8N910 161 aa9.76□□□□□ -0.85
SYNE1-236ENST00000537750 hDV103S1A0JD37 113 aa9.75□□□□□ -0.85
SYNE1-236ENST00000537750 SPART-AS1P0CW21 52 aa9.75□□□□□ -0.85
SYNE1-236ENST00000537750 KRTAP26-1Q6PEX3 210 aa9.75□□□□□ -0.85
SYNE1-236ENST00000537750 C1orf64Q8NEQ6 169 aa9.74□□□□□ -0.85
SYNE1-236ENST00000537750 IGLV5-48A0A075B6I7 105 aa9.73□□□□□ -0.85
SYNE1-236ENST00000537750 F8WDY8 70 aa9.73□□□□□ -0.85
SYNE1-236ENST00000537750 PRR4Q16378 134 aa9.73□□□□□ -0.85
SYNE1-236ENST00000537750 F8P00451 2351 aa9.73□□□□□ -0.85
SYNE1-236ENST00000537750 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
SYNE1-236ENST00000537750 V9GYY9 64 aa9.73□□□□□ -0.85
SYNE1-236ENST00000537750 TEP1Q99973 2627 aaKnown RBP9.72□□□□□ -0.85
SYNE1-236ENST00000537750 PDZD2O15018 2839 aa9.71□□□□□ -0.85
SYNE1-236ENST00000537750 APOC4P55056 127 aa9.71□□□□□ -0.85
SYNE1-236ENST00000537750 C7orf33Q8WU49 177 aa9.71□□□□□ -0.85
SYNE1-236ENST00000537750 TRRAPQ9Y4A5 3859 aa9.71□□□□□ -0.86
SYNE1-236ENST00000537750 PRB2P02812 416 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-236ENST00000537750 NKAPP1Q8N9T2 125 aa9.71□□□□□ -0.86
SYNE1-236ENST00000537750 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
SYNE1-236ENST00000537750 ST20-AS1Q8NBB2 130 aa9.7□□□□□ -0.86
SYNE1-236ENST00000537750 C1orf137Q5JT78 98 aa9.7□□□□□ -0.86
SYNE1-236ENST00000537750 KCNQ1DNQ9H478 68 aa9.7□□□□□ -0.86
SYNE1-236ENST00000537750 LCE6AA0A183 80 aa9.69□□□□□ -0.86
SYNE1-236ENST00000537750 K7EQZ3 153 aa9.69□□□□□ -0.86
SYNE1-236ENST00000537750 PSPHP1O15172 72 aa9.69□□□□□ -0.86
SYNE1-236ENST00000537750 DSCR10P59022 87 aa9.69□□□□□ -0.86
SYNE1-236ENST00000537750 Q9BRP9 147 aa9.68□□□□□ -0.86
SYNE1-236ENST00000537750 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-236ENST00000537750 ZCCHC13Q8WW36 166 aaKnown RBP9.67□□□□□ -0.86
SYNE1-236ENST00000537750 TENM4Q6N022 2769 aa9.66□□□□□ -0.86
SYNE1-236ENST00000537750 ETDCA0A1B0GVM5 59 aa9.66□□□□□ -0.86
SYNE1-236ENST00000537750 NOTCH2Q04721 2471 aa9.66□□□□□ -0.86
SYNE1-236ENST00000537750 IGKV2D-24A0A075B6R9 120 aa9.66□□□□□ -0.86
SYNE1-236ENST00000537750 SEC61GP60059 68 aa9.66□□□□□ -0.86
SYNE1-236ENST00000537750 ATRQ13535 2644 aa9.66□□□□□ -0.86
SYNE1-236ENST00000537750 A0A0G2JQZ4 141 aa9.65□□□□□ -0.86
SYNE1-236ENST00000537750 A0A1W2PNN7 141 aa9.65□□□□□ -0.86
SYNE1-236ENST00000537750 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
SYNE1-236ENST00000537750 Q8NBF4 154 aa9.65□□□□□ -0.86
SYNE1-236ENST00000537750 FAM168BA1KXE4 195 aa9.65□□□□□ -0.87
SYNE1-236ENST00000537750 Q1T7F1 81 aa9.65□□□□□ -0.87
SYNE1-236ENST00000537750 TNP2Q05952 138 aa9.64□□□□□ -0.87
SYNE1-236ENST00000537750 SMR3AQ99954 134 aa9.64□□□□□ -0.87
SYNE1-236ENST00000537750 BAHCC1Q9P281 2608 aa9.64□□□□□ -0.87
SYNE1-236ENST00000537750 Q6ZRX8 168 aa9.64□□□□□ -0.87
SYNE1-236ENST00000537750 DEFB116Q30KQ4 102 aa9.63□□□□□ -0.87
SYNE1-236ENST00000537750 TRAV22A0A0B4J277 110 aa9.62□□□□□ -0.87
SYNE1-236ENST00000537750 DHRS4-AS1Q9P1J3 65 aa9.62□□□□□ -0.87
SYNE1-236ENST00000537750 PRR15Q8IV56 129 aa9.61□□□□□ -0.87
SYNE1-236ENST00000537750 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-236ENST00000537750 SPRR4Q96PI1 79 aa9.6□□□□□ -0.87
SYNE1-236ENST00000537750 RETNQ9HD89 108 aa9.59□□□□□ -0.87
SYNE1-236ENST00000537750 A0A1B0GW54 56 aa9.58□□□□□ -0.88
SYNE1-236ENST00000537750 HCG22E2RYF7 251 aa9.58□□□□□ -0.88
SYNE1-236ENST00000537750 TENM3Q9P273 2699 aa9.58□□□□□ -0.88
SYNE1-236ENST00000537750 A8MU10 97 aa9.57□□□□□ -0.88
SYNE1-236ENST00000537750 WFDC13Q8IUB5 93 aa9.57□□□□□ -0.88
SYNE1-236ENST00000537750 FASNP49327 2511 aaKnown RBP9.57□□□□□ -0.88
SYNE1-236ENST00000537750 IGLV1-50A0A075B6I6 118 aa9.57□□□□□ -0.88
SYNE1-236ENST00000537750 A8MUN3 132 aa9.57□□□□□ -0.88
SYNE1-236ENST00000537750 PSCAO43653 123 aa9.56□□□□□ -0.88
SYNE1-236ENST00000537750 PMAIP1Q13794 54 aa9.56□□□□□ -0.88
SYNE1-236ENST00000537750 KRTAP7-1Q8IUC3 87 aa9.56□□□□□ -0.88
SYNE1-236ENST00000537750 UBE2BP63146 152 aa9.55□□□□□ -0.88
SYNE1-236ENST00000537750 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
SYNE1-236ENST00000537750 HELZ2Q9BYK8 2649 aaKnown RBP9.54□□□□□ -0.88
SYNE1-236ENST00000537750 SPRR1AP35321 89 aa9.53□□□□□ -0.88
SYNE1-236ENST00000537750 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
SYNE1-236ENST00000537750 KMT2BQ9UMN6 2715 aaPredicted RBP9.53□□□□□ -0.88
SYNE1-236ENST00000537750 LINC00208Q96KT6 92 aa9.52□□□□□ -0.89
SYNE1-236ENST00000537750 RPL37AP61513 92 aaKnown RBP9.51□□□□□ -0.89
SYNE1-236ENST00000537750 CASC10Q5T4H9 136 aa9.51□□□□□ -0.89
SYNE1-236ENST00000537750 SRRM2Q9UQ35 2752 aaKnown RBP9.51□□□□□ -0.89
SYNE1-236ENST00000537750 OTOGQ6ZRI0 2925 aa9.51□□□□□ -0.89
SYNE1-236ENST00000537750 H3BNG1 76 aa9.49□□□□□ -0.89
SYNE1-236ENST00000537750 LINC01556Q5JQF7 62 aa9.49□□□□□ -0.89
SYNE1-236ENST00000537750 IGFL1Q6UW32 110 aa9.49□□□□□ -0.89
SYNE1-236ENST00000537750 PLA2G2DQ9UNK4 145 aa9.48□□□□□ -0.89
SYNE1-236ENST00000537750 A0A087WSZ3 146 aa9.48□□□□□ -0.89
SYNE1-236ENST00000537750 MP68P56378 58 aa9.48□□□□□ -0.89
SYNE1-236ENST00000537750 MRPL55Q7Z7F7 128 aaKnown RBP9.48□□□□□ -0.89
SYNE1-236ENST00000537750 B9D2Q9BPU9 175 aa9.48□□□□□ -0.89
SYNE1-236ENST00000537750 TLX1NBP0CAT3 122 aa9.47□□□□□ -0.89
SYNE1-236ENST00000537750 NDUFB1O75438 58 aa9.47□□□□□ -0.89
SYNE1-236ENST00000537750 Q5VV11 94 aa9.47□□□□□ -0.89
SYNE1-236ENST00000537750 IGLV5-37A0A075B6J1 123 aa9.45□□□□□ -0.9
SYNE1-236ENST00000537750 NSD1Q96L73 2696 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-236ENST00000537750 ANK2Q01484 3957 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms