RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 DNAJC9-AS1A6NH13 148 aa5.55□□□□□ -1.52
SRGAP1-202ENST00000537556 FSHBP01225 129 aa5.55□□□□□ -1.52
SRGAP1-202ENST00000537556 SPINK7P58062 85 aa5.55□□□□□ -1.52
SRGAP1-202ENST00000537556 A0A087X002 238 aa5.54□□□□□ -1.52
SRGAP1-202ENST00000537556 C6orf48Q9UBA6 75 aa5.54□□□□□ -1.52
SRGAP1-202ENST00000537556 HRNRQ86YZ3 2850 aaPredicted RBP5.54□□□□□ -1.52
SRGAP1-202ENST00000537556 ZFYVE26Q68DK2 2539 aa5.54□□□□□ -1.52
SRGAP1-202ENST00000537556 WFDC10BQ8IUB3 73 aa5.54□□□□□ -1.52
SRGAP1-202ENST00000537556 J3QKU1 62 aa5.53□□□□□ -1.52
SRGAP1-202ENST00000537556 DEFB116Q30KQ4 102 aa5.53□□□□□ -1.52
SRGAP1-202ENST00000537556 TNP2Q05952 138 aa5.53□□□□□ -1.52
SRGAP1-202ENST00000537556 DHRS4-AS1Q9P1J3 65 aa5.53□□□□□ -1.52
SRGAP1-202ENST00000537556 CMC4P56277 68 aaPredicted RBP5.52□□□□□ -1.53
SRGAP1-202ENST00000537556 DEFB112Q30KQ8 113 aa5.52□□□□□ -1.53
SRGAP1-202ENST00000537556 A0A1W2PPR1 153 aa5.52□□□□□ -1.53
SRGAP1-202ENST00000537556 CSNK1G2-AS1Q8NCQ2 148 aa5.52□□□□□ -1.53
SRGAP1-202ENST00000537556 PRO0255Q9UI72 69 aa5.52□□□□□ -1.53
SRGAP1-202ENST00000537556 DEFB130BP0DP73 79 aa5.52□□□□□ -1.53
SRGAP1-202ENST00000537556 DEFB130AP0DP74 79 aa5.52□□□□□ -1.53
SRGAP1-202ENST00000537556 A0A096LPF7 62 aa5.51□□□□□ -1.53
SRGAP1-202ENST00000537556 C18orf65Q6ZTR6 163 aa5.51□□□□□ -1.53
SRGAP1-202ENST00000537556 NOTCH3Q9UM47 2321 aa5.51□□□□□ -1.53
SRGAP1-202ENST00000537556 CFAP46Q8IYW2 2715 aa5.51□□□□□ -1.53
SRGAP1-202ENST00000537556 MSMBP08118 114 aa5.5□□□□□ -1.53
SRGAP1-202ENST00000537556 Q8NAQ8 132 aa5.5□□□□□ -1.53
SRGAP1-202ENST00000537556 C4orf3Q8WVX3 66 aa5.5□□□□□ -1.53
SRGAP1-202ENST00000537556 BAHCC1Q9P281 2608 aa5.5□□□□□ -1.53
SRGAP1-202ENST00000537556 KRTAP29-1A8MX34 341 aaPredicted RBP5.5□□□□□ -1.53
SRGAP1-202ENST00000537556 GIG44P09565 113 aaPredicted RBP5.5□□□□□ -1.53
SRGAP1-202ENST00000537556 C7orf33Q8WU49 177 aa5.5□□□□□ -1.53
SRGAP1-202ENST00000537556 ATRXP46100 2492 aa5.5□□□□□ -1.53
SRGAP1-202ENST00000537556 BSNQ9UPA5 3926 aa5.49□□□□□ -1.53
SRGAP1-202ENST00000537556 EGFEM1PQ0D2K5 195 aa5.49□□□□□ -1.53
SRGAP1-202ENST00000537556 CELSR1Q9NYQ6 3014 aa5.49□□□□□ -1.53
SRGAP1-202ENST00000537556 UBR5O95071 2799 aaPredicted RBP5.49□□□□□ -1.53
SRGAP1-202ENST00000537556 GCN1Q92616 2671 aaKnown RBP5.48□□□□□ -1.53
SRGAP1-202ENST00000537556 ABCA2Q9BZC7 2435 aa5.48□□□□□ -1.53
SRGAP1-202ENST00000537556 CAMK2N2Q96S95 79 aa5.48□□□□□ -1.53
SRGAP1-202ENST00000537556 ZNF702PQ9H963 129 aa5.48□□□□□ -1.53
SRGAP1-202ENST00000537556 ADM2Q7Z4H4 148 aa5.48□□□□□ -1.53
SRGAP1-202ENST00000537556 RETNLBQ9BQ08 111 aa5.46□□□□□ -1.53
SRGAP1-202ENST00000537556 HELZ2Q9BYK8 2649 aaKnown RBP5.46□□□□□ -1.54
SRGAP1-202ENST00000537556 ZNF462Q96JM2 2506 aa5.46□□□□□ -1.54
SRGAP1-202ENST00000537556 B4DSR2 109 aa5.46□□□□□ -1.54
SRGAP1-202ENST00000537556 Q6ZRX8 168 aa5.46□□□□□ -1.54
SRGAP1-202ENST00000537556 SPG11Q96JI7 2443 aa5.45□□□□□ -1.54
SRGAP1-202ENST00000537556 TENM4Q6N022 2769 aa5.45□□□□□ -1.54
SRGAP1-202ENST00000537556 LINC00476Q8WZB0 136 aa5.45□□□□□ -1.54
SRGAP1-202ENST00000537556 PRR34Q9NV39 138 aa5.45□□□□□ -1.54
SRGAP1-202ENST00000537556 IGLV1-50A0A075B6I6 118 aa5.44□□□□□ -1.54
SRGAP1-202ENST00000537556 FASNP49327 2511 aaKnown RBP5.44□□□□□ -1.54
SRGAP1-202ENST00000537556 TLN1Q9Y490 2541 aaKnown RBP5.44□□□□□ -1.54
SRGAP1-202ENST00000537556 RTL8CO15255 209 aa5.44□□□□□ -1.54
SRGAP1-202ENST00000537556 CRYBG3Q68DQ2 2970 aa5.44□□□□□ -1.54
SRGAP1-202ENST00000537556 MYO18BQ8IUG5 2567 aa5.44□□□□□ -1.54
SRGAP1-202ENST00000537556 IGLV5-37A0A075B6J1 123 aa5.43□□□□□ -1.54
SRGAP1-202ENST00000537556 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
SRGAP1-202ENST00000537556 IGLV1-51P01701 117 aa5.42□□□□□ -1.54
SRGAP1-202ENST00000537556 A0A087WSZ3 146 aa5.41□□□□□ -1.54
SRGAP1-202ENST00000537556 RPL37AP61513 92 aaKnown RBP5.41□□□□□ -1.54
SRGAP1-202ENST00000537556 LELP1Q5T871 98 aa5.41□□□□□ -1.54
SRGAP1-202ENST00000537556 CSPG4Q6UVK1 2322 aa5.41□□□□□ -1.54
SRGAP1-202ENST00000537556 H0Y9J4 135 aa5.4□□□□□ -1.54
SRGAP1-202ENST00000537556 HRES1P13985 223 aa5.4□□□□□ -1.54
SRGAP1-202ENST00000537556 Q6YL49 198 aa5.4□□□□□ -1.54
SRGAP1-202ENST00000537556 A8MWP4 228 aa5.4□□□□□ -1.55
SRGAP1-202ENST00000537556 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.55
SRGAP1-202ENST00000537556 NBPF19A0A087WUL8 3843 aa5.39□□□□□ -1.55
SRGAP1-202ENST00000537556 IGFL1Q6UW32 110 aa5.39□□□□□ -1.55
SRGAP1-202ENST00000537556 DEFB131BA0A096LNP1 70 aa5.38□□□□□ -1.55
SRGAP1-202ENST00000537556 KRTAP4-16G5E9R7 235 aaPredicted RBP5.38□□□□□ -1.55
SRGAP1-202ENST00000537556 ANKRD17O75179 2603 aaKnown RBP5.38□□□□□ -1.55
SRGAP1-202ENST00000537556 SPRR1AP35321 89 aa5.37□□□□□ -1.55
SRGAP1-202ENST00000537556 CSAG1Q6PB30 78 aa5.37□□□□□ -1.55
SRGAP1-202ENST00000537556 ZNF706Q9Y5V0 76 aaPredicted RBP5.37□□□□□ -1.55
SRGAP1-202ENST00000537556 CCL19Q99731 98 aa5.37□□□□□ -1.55
SRGAP1-202ENST00000537556 C19orf73Q9NVV2 129 aa5.37□□□□□ -1.55
SRGAP1-202ENST00000537556 CSMD2Q7Z408 3487 aa5.36□□□□□ -1.55
SRGAP1-202ENST00000537556 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
SRGAP1-202ENST00000537556 PLA2G2DQ9UNK4 145 aa5.35□□□□□ -1.55
SRGAP1-202ENST00000537556 RPL37AP8A6NKH3 93 aa5.35□□□□□ -1.55
SRGAP1-202ENST00000537556 TLN2Q9Y4G6 2542 aa5.35□□□□□ -1.55
SRGAP1-202ENST00000537556 IGKV2-24A0A0C4DH68 120 aa5.34□□□□□ -1.55
SRGAP1-202ENST00000537556 FLNCQ14315 2725 aa5.34□□□□□ -1.55
SRGAP1-202ENST00000537556 PTPN13Q12923 2485 aa5.34□□□□□ -1.55
SRGAP1-202ENST00000537556 IGLV8-61A0A075B6I0 122 aa5.34□□□□□ -1.55
SRGAP1-202ENST00000537556 NBASA2RRP1 2371 aa5.34□□□□□ -1.55
SRGAP1-202ENST00000537556 Q6ZR54 194 aa5.34□□□□□ -1.56
SRGAP1-202ENST00000537556 SETXQ7Z333 2677 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-202ENST00000537556 MMP24-AS1A0A0U1RRL7 71 aa5.33□□□□□ -1.56
SRGAP1-202ENST00000537556 C1orf134Q5TEV5 83 aa5.33□□□□□ -1.56
SRGAP1-202ENST00000537556 C15orf56Q8N910 161 aa5.33□□□□□ -1.56
SRGAP1-202ENST00000537556 APCP25054 2843 aa5.33□□□□□ -1.56
SRGAP1-202ENST00000537556 DOPEY1Q5JWR5 2465 aa5.32□□□□□ -1.56
SRGAP1-202ENST00000537556 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
SRGAP1-202ENST00000537556 A0A1W2PNN7 141 aa5.32□□□□□ -1.56
SRGAP1-202ENST00000537556 X6R8D5 127 aa5.32□□□□□ -1.56
SRGAP1-202ENST00000537556 VPS13CQ709C8 3753 aa5.32□□□□□ -1.56
SRGAP1-202ENST00000537556 JMJD1CQ15652 2540 aa5.32□□□□□ -1.56
SRGAP1-202ENST00000537556 LINC00472Q9H8W2 130 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms