RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 ZNF706Q9Y5V0 76 aaPredicted RBP13.68□□□□□ -0.22
CHFR-215ENST00000537551 B5MCH6 92 aa13.67□□□□□ -0.22
CHFR-215ENST00000537551 PCP2Q8IVA1 136 aa13.67□□□□□ -0.22
CHFR-215ENST00000537551 OR13C6PQ8NH95 151 aa13.67□□□□□ -0.22
CHFR-215ENST00000537551 SPRR4Q96PI1 79 aa13.67□□□□□ -0.22
CHFR-215ENST00000537551 TSPAN13O95857 204 aa13.65□□□□□ -0.22
CHFR-215ENST00000537551 SPANXDQ9BXN6 97 aa13.65□□□□□ -0.22
CHFR-215ENST00000537551 CBY1Q9Y3M2 126 aa13.65□□□□□ -0.22
CHFR-215ENST00000537551 HSBP1L1C9JCN9 74 aa13.64□□□□□ -0.23
CHFR-215ENST00000537551 ZNF73O43830 326 aaPredicted RBP13.63□□□□□ -0.23
CHFR-215ENST00000537551 COPS9Q8WXC6 57 aa13.63□□□□□ -0.23
CHFR-215ENST00000537551 LINC00518Q8N0U6 118 aa13.62□□□□□ -0.23
CHFR-215ENST00000537551 HINT1P49773 126 aaPredicted RBP13.61□□□□□ -0.23
CHFR-215ENST00000537551 Q6ZRX8 168 aa13.61□□□□□ -0.23
CHFR-215ENST00000537551 PPDPFQ9H3Y8 114 aa13.61□□□□□ -0.23
CHFR-215ENST00000537551 SCGB1D1O95968 90 aa13.6□□□□□ -0.23
CHFR-215ENST00000537551 IFITM1P13164 125 aa13.6□□□□□ -0.23
CHFR-215ENST00000537551 JOSD1Q15040 202 aaPredicted RBP13.6□□□□□ -0.23
CHFR-215ENST00000537551 C5orf52A6NGY3 159 aa13.59□□□□□ -0.23
CHFR-215ENST00000537551 Q6ZVH6 145 aa13.59□□□□□ -0.23
CHFR-215ENST00000537551 C3orf22Q8N5N4 141 aa13.59□□□□□ -0.23
CHFR-215ENST00000537551 LINC00304Q8N9R0 145 aa13.59□□□□□ -0.23
CHFR-215ENST00000537551 Q9BRP9 147 aa13.58□□□□□ -0.24
CHFR-215ENST00000537551 ERC2-IT1O76042 136 aa13.57□□□□□ -0.24
CHFR-215ENST00000537551 GAGE2AQ6NT46 116 aa13.57□□□□□ -0.24
CHFR-215ENST00000537551 MUSTN1Q8IVN3 82 aa13.56□□□□□ -0.24
CHFR-215ENST00000537551 PRR4Q16378 134 aa13.55□□□□□ -0.24
CHFR-215ENST00000537551 LINC00483Q53H64 154 aa13.51□□□□□ -0.25
CHFR-215ENST00000537551 A6NDN8 102 aa13.5□□□□□ -0.25
CHFR-215ENST00000537551 LRP2P98164 4655 aa13.47□□□□□ -0.25
CHFR-215ENST00000537551 COX7BP24311 80 aa13.47□□□□□ -0.25
CHFR-215ENST00000537551 C6orf99Q4VX62 202 aa13.47□□□□□ -0.25
CHFR-215ENST00000537551 C4orf48Q5BLP8 95 aa13.47□□□□□ -0.25
CHFR-215ENST00000537551 UBR4Q5T4S7 5183 aa13.46□□□□□ -0.26
CHFR-215ENST00000537551 IGLV9-49A0A0B4J1Y8 123 aa13.45□□□□□ -0.26
CHFR-215ENST00000537551 SPAG11AQ6PDA7 123 aa13.45□□□□□ -0.26
CHFR-215ENST00000537551 DHRS4-AS1Q9P1J3 65 aa13.45□□□□□ -0.26
CHFR-215ENST00000537551 ST20-AS1Q8NBB2 130 aa13.44□□□□□ -0.26
CHFR-215ENST00000537551 Q8NBF4 154 aa13.44□□□□□ -0.26
CHFR-215ENST00000537551 TRAV13-2A0A0B4J235 113 aa13.43□□□□□ -0.26
CHFR-215ENST00000537551 ELOF1P60002 83 aaKnown RBP13.43□□□□□ -0.26
CHFR-215ENST00000537551 CTAG1AP78358 180 aa13.43□□□□□ -0.26
CHFR-215ENST00000537551 MOBPQ13875 183 aa13.41□□□□□ -0.26
CHFR-215ENST00000537551 RETNLBQ9BQ08 111 aa13.41□□□□□ -0.26
CHFR-215ENST00000537551 COX8AP10176 69 aa13.4□□□□□ -0.26
CHFR-215ENST00000537551 TRBV7-6A0A0J9YX20 115 aa13.39□□□□□ -0.27
CHFR-215ENST00000537551 SSBP3-AS1Q7Z2R9 100 aa13.39□□□□□ -0.27
CHFR-215ENST00000537551 A0A1B0GWB2 263 aa13.37□□□□□ -0.27
CHFR-215ENST00000537551 A4D1N5 150 aa13.37□□□□□ -0.27
CHFR-215ENST00000537551 HIST1H4GQ99525 98 aa13.37□□□□□ -0.27
CHFR-215ENST00000537551 LPAP08519 4548 aa13.37□□□□□ -0.27
CHFR-215ENST00000537551 C9orf153Q5TBE3 101 aa13.36□□□□□ -0.27
CHFR-215ENST00000537551 PAM16Q9Y3D7 125 aa13.36□□□□□ -0.27
CHFR-215ENST00000537551 SPATA45Q537H7 98 aa13.35□□□□□ -0.27
CHFR-215ENST00000537551 SMIM11BQ8TCY0 68 aa13.35□□□□□ -0.27
CHFR-215ENST00000537551 C14orf144Q96I85 54 aa13.35□□□□□ -0.27
CHFR-215ENST00000537551 DLEU1O43261 78 aa13.34□□□□□ -0.27
CHFR-215ENST00000537551 VAMP8Q9BV40 100 aa13.34□□□□□ -0.27
CHFR-215ENST00000537551 TAL2Q16559 108 aa13.33□□□□□ -0.28
CHFR-215ENST00000537551 SLC25A34Q6PIV7 304 aa13.33□□□□□ -0.28
CHFR-215ENST00000537551 SPINK1P00995 79 aa13.32□□□□□ -0.28
CHFR-215ENST00000537551 DEFB105AQ8NG35 78 aa13.32□□□□□ -0.28
CHFR-215ENST00000537551 SPRR1BP22528 89 aa13.31□□□□□ -0.28
CHFR-215ENST00000537551 LAMTOR3Q9UHA4 124 aa13.3□□□□□ -0.28
CHFR-215ENST00000537551 VAMP3Q15836 100 aa13.28□□□□□ -0.28
CHFR-215ENST00000537551 C12orf57Q99622 126 aa13.28□□□□□ -0.28
CHFR-215ENST00000537551 IGLV7-46A0A075B6I9 117 aa13.27□□□□□ -0.29
CHFR-215ENST00000537551 NHP2Q9NX24 153 aaKnown RBP13.27□□□□□ -0.29
CHFR-215ENST00000537551 TMA7Q9Y2S6 64 aaKnown RBP13.27□□□□□ -0.29
CHFR-215ENST00000537551 TEX49A0A1B0GTD5 131 aa13.26□□□□□ -0.29
CHFR-215ENST00000537551 SLC25A20O43772 301 aa13.24□□□□□ -0.29
CHFR-215ENST00000537551 HIGD1BQ9P298 99 aa13.24□□□□□ -0.29
CHFR-215ENST00000537551 Q1RN00 199 aa13.23□□□□□ -0.29
CHFR-215ENST00000537551 RPS29P62273 56 aaKnown RBP13.21□□□□□ -0.29
CHFR-215ENST00000537551 FP248Q71RG6 208 aaPredicted RBP13.19□□□□□ -0.3
CHFR-215ENST00000537551 PYY3Q5JQD4 70 aa13.18□□□□□ -0.3
CHFR-215ENST00000537551 C2orf91Q6ZV80 131 aa13.18□□□□□ -0.3
CHFR-215ENST00000537551 IGLV5-48A0A075B6I7 105 aa13.17□□□□□ -0.3
CHFR-215ENST00000537551 LINC01547P58512 204 aaPredicted RBP13.17□□□□□ -0.3
CHFR-215ENST00000537551 TPRXLQ17RH7 258 aa13.17□□□□□ -0.3
CHFR-215ENST00000537551 LINC00575Q6W349 94 aa13.17□□□□□ -0.3
CHFR-215ENST00000537551 RAB37Q96AX2 223 aa13.17□□□□□ -0.3
CHFR-215ENST00000537551 CDIP1Q9H305 208 aa13.17□□□□□ -0.3
CHFR-215ENST00000537551 H7C2G1 150 aa13.16□□□□□ -0.3
CHFR-215ENST00000537551 HRCT1Q6UXD1 115 aa13.16□□□□□ -0.3
CHFR-215ENST00000537551 Q8N377 158 aa13.16□□□□□ -0.3
CHFR-215ENST00000537551 hADV29S1A0JD25 119 aa13.15□□□□□ -0.3
CHFR-215ENST00000537551 CFC1BP0CG36 223 aa13.15□□□□□ -0.3
CHFR-215ENST00000537551 CFC1P0CG37 223 aa13.15□□□□□ -0.3
CHFR-215ENST00000537551 SMIM29Q86T20 159 aa13.15□□□□□ -0.3
CHFR-215ENST00000537551 BVES-AS1Q5T3Y7 98 aa13.14□□□□□ -0.31
CHFR-215ENST00000537551 PRO1933Q9H354 126 aa13.14□□□□□ -0.31
CHFR-215ENST00000537551 CEND1Q8N111 149 aa13.12□□□□□ -0.31
CHFR-215ENST00000537551 A0A0B4J2C4 111 aa13.1□□□□□ -0.31
CHFR-215ENST00000537551 Q6ZQY7 126 aa13.1□□□□□ -0.31
CHFR-215ENST00000537551 TMEM238LA0A1B0GVL6 79 aa13.08□□□□□ -0.32
CHFR-215ENST00000537551 A6NJY4 79 aa13.08□□□□□ -0.32
CHFR-215ENST00000537551 LIMD2Q9BT23 127 aa13.08□□□□□ -0.32
CHFR-215ENST00000537551 RNF213Q63HN8 5207 aa13.08□□□□□ -0.32
CHFR-215ENST00000537551 F8WEM9 126 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms