RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 SPANXCQ9NY87 97 aa10.17□□□□□ -0.78
GPN3-202ENST00000537466 SCGB1D4Q6XE38 83 aa10.16□□□□□ -0.78
GPN3-202ENST00000537466 SPRR4Q96PI1 79 aa10.16□□□□□ -0.78
GPN3-202ENST00000537466 TMA7Q9Y2S6 64 aaKnown RBP10.16□□□□□ -0.78
GPN3-202ENST00000537466 TRAV23DV6A0A075B6W5 121 aa10.14□□□□□ -0.79
GPN3-202ENST00000537466 LRP2P98164 4655 aa10.14□□□□□ -0.79
GPN3-202ENST00000537466 SPANXDQ9BXN6 97 aa10.14□□□□□ -0.79
GPN3-202ENST00000537466 Q9BRP9 147 aa10.12□□□□□ -0.79
GPN3-202ENST00000537466 C5orf52A6NGY3 159 aa10.11□□□□□ -0.79
GPN3-202ENST00000537466 ERC2-IT1O76042 136 aa10.11□□□□□ -0.79
GPN3-202ENST00000537466 TSPAN13O95857 204 aa10.11□□□□□ -0.79
GPN3-202ENST00000537466 Q6ZRX8 168 aa10.11□□□□□ -0.79
GPN3-202ENST00000537466 C3orf22Q8N5N4 141 aa10.11□□□□□ -0.79
GPN3-202ENST00000537466 ZNF73O43830 326 aaPredicted RBP10.1□□□□□ -0.79
GPN3-202ENST00000537466 OR13C6PQ8NH95 151 aa10.1□□□□□ -0.79
GPN3-202ENST00000537466 ZNF706Q9Y5V0 76 aaPredicted RBP10.1□□□□□ -0.79
GPN3-202ENST00000537466 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
GPN3-202ENST00000537466 LPAP08519 4548 aa10.08□□□□□ -0.8
GPN3-202ENST00000537466 LINC00304Q8N9R0 145 aa10.07□□□□□ -0.8
GPN3-202ENST00000537466 HSBP1L1C9JCN9 74 aa10.06□□□□□ -0.8
GPN3-202ENST00000537466 IFITM1P13164 125 aa10.06□□□□□ -0.8
GPN3-202ENST00000537466 MUSTN1Q8IVN3 82 aa10.06□□□□□ -0.8
GPN3-202ENST00000537466 LINC00518Q8N0U6 118 aa10.06□□□□□ -0.8
GPN3-202ENST00000537466 SCGB1D1O95968 90 aa10.05□□□□□ -0.8
GPN3-202ENST00000537466 Q6ZVH6 145 aa10.05□□□□□ -0.8
GPN3-202ENST00000537466 LINC00483Q53H64 154 aa10.04□□□□□ -0.8
GPN3-202ENST00000537466 GAGE2AQ6NT46 116 aa10.04□□□□□ -0.8
GPN3-202ENST00000537466 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
GPN3-202ENST00000537466 JOSD1Q15040 202 aaPredicted RBP10.04□□□□□ -0.8
GPN3-202ENST00000537466 COPS9Q8WXC6 57 aa10.04□□□□□ -0.8
GPN3-202ENST00000537466 PRR4Q16378 134 aa10.03□□□□□ -0.8
GPN3-202ENST00000537466 HINT1P49773 126 aaPredicted RBP10.02□□□□□ -0.81
GPN3-202ENST00000537466 C6orf99Q4VX62 202 aa10□□□□□ -0.81
GPN3-202ENST00000537466 ST20-AS1Q8NBB2 130 aa10□□□□□ -0.81
GPN3-202ENST00000537466 A6NDN8 102 aa9.98□□□□□ -0.81
GPN3-202ENST00000537466 ELOF1P60002 83 aaKnown RBP9.98□□□□□ -0.81
GPN3-202ENST00000537466 Q8NBF4 154 aa9.98□□□□□ -0.81
GPN3-202ENST00000537466 RETNLBQ9BQ08 111 aa9.98□□□□□ -0.81
GPN3-202ENST00000537466 IGLV9-49A0A0B4J1Y8 123 aa9.97□□□□□ -0.81
GPN3-202ENST00000537466 COX7BP24311 80 aa9.97□□□□□ -0.81
GPN3-202ENST00000537466 MOBPQ13875 183 aa9.96□□□□□ -0.82
GPN3-202ENST00000537466 COX8AP10176 69 aa9.95□□□□□ -0.82
GPN3-202ENST00000537466 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
GPN3-202ENST00000537466 SPAG11AQ6PDA7 123 aa9.94□□□□□ -0.82
GPN3-202ENST00000537466 TRAV13-2A0A0B4J235 113 aa9.93□□□□□ -0.82
GPN3-202ENST00000537466 CTAG1AP78358 180 aa9.93□□□□□ -0.82
GPN3-202ENST00000537466 A4D1N5 150 aa9.92□□□□□ -0.82
GPN3-202ENST00000537466 RNF213Q63HN8 5207 aa9.92□□□□□ -0.82
GPN3-202ENST00000537466 TRBV7-6A0A0J9YX20 115 aa9.91□□□□□ -0.82
GPN3-202ENST00000537466 SMIM11BQ8TCY0 68 aa9.91□□□□□ -0.82
GPN3-202ENST00000537466 PAM16Q9Y3D7 125 aa9.91□□□□□ -0.82
GPN3-202ENST00000537466 LOC105371267A0A1B0GV96 52 aa9.91□□□□□ -0.82
GPN3-202ENST00000537466 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
GPN3-202ENST00000537466 C14orf144Q96I85 54 aa9.91□□□□□ -0.82
GPN3-202ENST00000537466 A0A1B0GWB2 263 aa9.9□□□□□ -0.83
GPN3-202ENST00000537466 DLEU1O43261 78 aa9.9□□□□□ -0.83
GPN3-202ENST00000537466 SPRR1BP22528 89 aa9.9□□□□□ -0.83
GPN3-202ENST00000537466 SPATA45Q537H7 98 aa9.9□□□□□ -0.83
GPN3-202ENST00000537466 SSBP3-AS1Q7Z2R9 100 aa9.9□□□□□ -0.83
GPN3-202ENST00000537466 C9orf153Q5TBE3 101 aa9.89□□□□□ -0.83
GPN3-202ENST00000537466 HIST1H4GQ99525 98 aa9.89□□□□□ -0.83
GPN3-202ENST00000537466 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
GPN3-202ENST00000537466 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
GPN3-202ENST00000537466 VAMP8Q9BV40 100 aa9.87□□□□□ -0.83
GPN3-202ENST00000537466 SPINK1P00995 79 aa9.86□□□□□ -0.83
GPN3-202ENST00000537466 C12orf57Q99622 126 aa9.86□□□□□ -0.83
GPN3-202ENST00000537466 DEFB105AQ8NG35 78 aa9.85□□□□□ -0.83
GPN3-202ENST00000537466 TAL2Q16559 108 aa9.85□□□□□ -0.83
GPN3-202ENST00000537466 IGLV7-46A0A075B6I9 117 aa9.83□□□□□ -0.84
GPN3-202ENST00000537466 LINC01547P58512 204 aaPredicted RBP9.83□□□□□ -0.84
GPN3-202ENST00000537466 SLC25A34Q6PIV7 304 aa9.83□□□□□ -0.84
GPN3-202ENST00000537466 C2orf91Q6ZV80 131 aa9.83□□□□□ -0.84
GPN3-202ENST00000537466 HIGD1BQ9P298 99 aa9.83□□□□□ -0.84
GPN3-202ENST00000537466 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
GPN3-202ENST00000537466 TEX49A0A1B0GTD5 131 aa9.81□□□□□ -0.84
GPN3-202ENST00000537466 Q1RN00 199 aa9.81□□□□□ -0.84
GPN3-202ENST00000537466 PYY3Q5JQD4 70 aa9.81□□□□□ -0.84
GPN3-202ENST00000537466 IGLV5-48A0A075B6I7 105 aa9.79□□□□□ -0.84
GPN3-202ENST00000537466 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
GPN3-202ENST00000537466 SMIM29Q86T20 159 aa9.79□□□□□ -0.84
GPN3-202ENST00000537466 Q8N377 158 aa9.79□□□□□ -0.84
GPN3-202ENST00000537466 VAMP3Q15836 100 aa9.79□□□□□ -0.84
GPN3-202ENST00000537466 TPRXLQ17RH7 258 aa9.79□□□□□ -0.84
GPN3-202ENST00000537466 NHP2Q9NX24 153 aaKnown RBP9.79□□□□□ -0.84
GPN3-202ENST00000537466 CFC1BP0CG36 223 aa9.78□□□□□ -0.84
GPN3-202ENST00000537466 CFC1P0CG37 223 aa9.78□□□□□ -0.84
GPN3-202ENST00000537466 LINC00575Q6W349 94 aa9.78□□□□□ -0.84
GPN3-202ENST00000537466 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.85
GPN3-202ENST00000537466 SLC25A20O43772 301 aa9.75□□□□□ -0.85
GPN3-202ENST00000537466 HRCT1Q6UXD1 115 aa9.75□□□□□ -0.85
GPN3-202ENST00000537466 hADV29S1A0JD25 119 aa9.73□□□□□ -0.85
GPN3-202ENST00000537466 H7C2G1 150 aa9.73□□□□□ -0.85
GPN3-202ENST00000537466 SMIM6P0DI80 62 aa9.73□□□□□ -0.85
GPN3-202ENST00000537466 CEND1Q8N111 149 aa9.73□□□□□ -0.85
GPN3-202ENST00000537466 RAB37Q96AX2 223 aa9.73□□□□□ -0.85
GPN3-202ENST00000537466 CDIP1Q9H305 208 aa9.73□□□□□ -0.85
GPN3-202ENST00000537466 Q6ZQY7 126 aa9.72□□□□□ -0.85
GPN3-202ENST00000537466 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
GPN3-202ENST00000537466 BVES-AS1Q5T3Y7 98 aa9.72□□□□□ -0.85
GPN3-202ENST00000537466 PRO1933Q9H354 126 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms