RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 KCNQ1DNQ9H478 68 aa8.87□□□□□ -0.99
SMG6-203ENST00000536871 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
SMG6-203ENST00000536871 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
SMG6-203ENST00000536871 RBM3P98179 157 aaKnown RBP8.86□□□□□ -0.99
SMG6-203ENST00000536871 OXTP01178 125 aa8.85□□□□□ -0.99
SMG6-203ENST00000536871 PKIGQ9Y2B9 76 aa8.85□□□□□ -0.99
SMG6-203ENST00000536871 PKD1L1Q8TDX9 2849 aa8.85□□□□□ -0.99
SMG6-203ENST00000536871 Q6ZQY7 126 aa8.85□□□□□ -0.99
SMG6-203ENST00000536871 CYSTM1Q9H1C7 97 aa8.85□□□□□ -0.99
SMG6-203ENST00000536871 LOC110117498A0A087WWA1 95 aa8.84□□□□□ -0.99
SMG6-203ENST00000536871 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
SMG6-203ENST00000536871 DSCR8Q96T75 97 aa8.84□□□□□ -0.99
SMG6-203ENST00000536871 LAMTOR3Q9UHA4 124 aa8.84□□□□□ -0.99
SMG6-203ENST00000536871 SERP1Q9Y6X1 66 aa8.84□□□□□ -0.99
SMG6-203ENST00000536871 TENM3Q9P273 2699 aa8.84□□□□□ -0.99
SMG6-203ENST00000536871 PRYO14603 147 aa8.83□□□□□ -1
SMG6-203ENST00000536871 C4orf26Q17RF5 130 aa8.83□□□□□ -1
SMG6-203ENST00000536871 CNBPP62633 177 aaKnown RBP8.82□□□□□ -1
SMG6-203ENST00000536871 HRCT1Q6UXD1 115 aa8.82□□□□□ -1
SMG6-203ENST00000536871 PSCAO43653 123 aa8.81□□□□□ -1
SMG6-203ENST00000536871 C7orf33Q8WU49 177 aa8.81□□□□□ -1
SMG6-203ENST00000536871 LINC00846Q9NV44 126 aa8.81□□□□□ -1
SMG6-203ENST00000536871 DHRS4-AS1Q9P1J3 65 aa8.81□□□□□ -1
SMG6-203ENST00000536871 ANK2Q01484 3957 aa8.8□□□□□ -1
SMG6-203ENST00000536871 FAM236DA0A1B0GTK5 79 aa8.8□□□□□ -1
SMG6-203ENST00000536871 FAM236CP0DP71 79 aa8.8□□□□□ -1
SMG6-203ENST00000536871 CASC10Q5T4H9 136 aa8.8□□□□□ -1
SMG6-203ENST00000536871 NOTCH1P46531 2555 aa8.79□□□□□ -1
SMG6-203ENST00000536871 SERTAD4-AS1Q5TG53 156 aa8.79□□□□□ -1
SMG6-203ENST00000536871 IGLV1-50A0A075B6I6 118 aa8.78□□□□□ -1
SMG6-203ENST00000536871 IGKV3D-7A0A0C4DH55 119 aa8.78□□□□□ -1
SMG6-203ENST00000536871 Q6ZQT0 140 aa8.78□□□□□ -1
SMG6-203ENST00000536871 UBL5Q9BZL1 73 aa8.78□□□□□ -1
SMG6-203ENST00000536871 HUWE1Q7Z6Z7 4374 aaKnown RBP8.77□□□□□ -1.01
SMG6-203ENST00000536871 ATP5EP56381 51 aaPredicted RBP8.77□□□□□ -1.01
SMG6-203ENST00000536871 C16orf90A8MZG2 172 aa8.77□□□□□ -1.01
SMG6-203ENST00000536871 SPRR1AP35321 89 aa8.77□□□□□ -1.01
SMG6-203ENST00000536871 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1.01
SMG6-203ENST00000536871 ETDCA0A1B0GVM5 59 aa8.75□□□□□ -1.01
SMG6-203ENST00000536871 SMIM26A0A096LP01 95 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 KLKP1Q107X0 134 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 Q6ZRX8 168 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 KRTAP1-5Q9BYS1 174 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 MGAM2Q2M2H8 2515 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 NBEAL1Q6ZS30 2694 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 A0A087WVE0 104 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 TRBV7-4A0A0J9YYF1 115 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 NDUFC1O43677 76 aa8.74□□□□□ -1.01
SMG6-203ENST00000536871 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
SMG6-203ENST00000536871 KRTAP4-16G5E9R7 235 aaPredicted RBP8.72□□□□□ -1.01
SMG6-203ENST00000536871 A0A1B0GW54 56 aa8.7□□□□□ -1.02
SMG6-203ENST00000536871 H7BZZ5 65 aa8.7□□□□□ -1.02
SMG6-203ENST00000536871 FAM168BA1KXE4 195 aa8.7□□□□□ -1.02
SMG6-203ENST00000536871 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
SMG6-203ENST00000536871 LINC00474Q9P2X8 69 aa8.7□□□□□ -1.02
SMG6-203ENST00000536871 RPL37AP8A6NKH3 93 aa8.68□□□□□ -1.02
SMG6-203ENST00000536871 KRTAP7-1Q8IUC3 87 aa8.68□□□□□ -1.02
SMG6-203ENST00000536871 C20orf197Q8N268 126 aa8.68□□□□□ -1.02
SMG6-203ENST00000536871 A0A096LNI7 61 aa8.67□□□□□ -1.02
SMG6-203ENST00000536871 LINC00336Q6ZUF6 198 aa8.67□□□□□ -1.02
SMG6-203ENST00000536871 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
SMG6-203ENST00000536871 IGLV5-48A0A075B6I7 105 aa8.66□□□□□ -1.02
SMG6-203ENST00000536871 LRCOL1A6NCL2 159 aa8.65□□□□□ -1.02
SMG6-203ENST00000536871 CXCL6P80162 114 aa8.65□□□□□ -1.02
SMG6-203ENST00000536871 Q8N377 158 aa8.65□□□□□ -1.02
SMG6-203ENST00000536871 Q9BRP9 147 aa8.64□□□□□ -1.03
SMG6-203ENST00000536871 UBE2BP63146 152 aa8.64□□□□□ -1.03
SMG6-203ENST00000536871 Q6ZRN7 208 aaPredicted RBP8.63□□□□□ -1.03
SMG6-203ENST00000536871 Q6ZVQ6 151 aa8.63□□□□□ -1.03
SMG6-203ENST00000536871 DNAH9Q9NYC9 4486 aa8.62□□□□□ -1.03
SMG6-203ENST00000536871 IGKV2-24A0A0C4DH68 120 aa8.62□□□□□ -1.03
SMG6-203ENST00000536871 LINC01547P58512 204 aaPredicted RBP8.62□□□□□ -1.03
SMG6-203ENST00000536871 DNAH1Q9P2D7 4330 aa8.62□□□□□ -1.03
SMG6-203ENST00000536871 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.62□□□□□ -1.03
SMG6-203ENST00000536871 ERC2-IT1O76042 136 aa8.62□□□□□ -1.03
SMG6-203ENST00000536871 H0Y9J4 135 aa8.61□□□□□ -1.03
SMG6-203ENST00000536871 DEFB105AQ8NG35 78 aa8.61□□□□□ -1.03
SMG6-203ENST00000536871 FUSP35637 526 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMG6-203ENST00000536871 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
SMG6-203ENST00000536871 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
SMG6-203ENST00000536871 FAM19A1Q7Z5A9 133 aa8.6□□□□□ -1.03
SMG6-203ENST00000536871 STAB2Q8WWQ8 2551 aa8.59□□□□□ -1.03
SMG6-203ENST00000536871 HAMPP81172 84 aa8.58□□□□□ -1.04
SMG6-203ENST00000536871 TNP2Q05952 138 aa8.58□□□□□ -1.04
SMG6-203ENST00000536871 KRTAP21-3Q3LHN1 58 aa8.58□□□□□ -1.04
SMG6-203ENST00000536871 F8WEM9 126 aa8.57□□□□□ -1.04
SMG6-203ENST00000536871 V9GYY9 64 aa8.57□□□□□ -1.04
SMG6-203ENST00000536871 M0R2N4 97 aa8.57□□□□□ -1.04
SMG6-203ENST00000536871 DYNC2H1Q8NCM8 4307 aaKnown RBP8.56□□□□□ -1.04
SMG6-203ENST00000536871 NREPQ16612 68 aa8.55□□□□□ -1.04
SMG6-203ENST00000536871 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
SMG6-203ENST00000536871 A0A087WTM6 91 aa8.54□□□□□ -1.04
SMG6-203ENST00000536871 C1orf195Q5TG92 126 aa8.54□□□□□ -1.04
SMG6-203ENST00000536871 Q6ZR54 194 aa8.54□□□□□ -1.04
SMG6-203ENST00000536871 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
SMG6-203ENST00000536871 Q8NBF4 154 aa8.53□□□□□ -1.04
SMG6-203ENST00000536871 SPRR4Q96PI1 79 aa8.52□□□□□ -1.05
SMG6-203ENST00000536871 IGLV8-61A0A075B6I0 122 aa8.51□□□□□ -1.05
SMG6-203ENST00000536871 PHF5AQ7RTV0 110 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 859.9 ms