RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 DSCR10P59022 87 aa6.71□□□□□ -1.34
RFX4-204ENST00000536688 DSCR9P59020 149 aa6.7□□□□□ -1.34
RFX4-204ENST00000536688 PRR4Q16378 134 aa6.7□□□□□ -1.34
RFX4-204ENST00000536688 C4orf3Q8WVX3 66 aa6.7□□□□□ -1.34
RFX4-204ENST00000536688 SPRR4Q96PI1 79 aa6.7□□□□□ -1.34
RFX4-204ENST00000536688 CSNK1G2-AS1Q8NCQ2 148 aa6.69□□□□□ -1.34
RFX4-204ENST00000536688 MSMBP08118 114 aa6.69□□□□□ -1.34
RFX4-204ENST00000536688 REG3AQ06141 175 aa6.69□□□□□ -1.34
RFX4-204ENST00000536688 NKAPP1Q8N9T2 125 aa6.69□□□□□ -1.34
RFX4-204ENST00000536688 POLQO75417 2590 aa6.69□□□□□ -1.34
RFX4-204ENST00000536688 GIG44P09565 113 aaPredicted RBP6.68□□□□□ -1.34
RFX4-204ENST00000536688 CLPSL2Q6UWE3 100 aa6.68□□□□□ -1.34
RFX4-204ENST00000536688 Q8NBF4 154 aa6.68□□□□□ -1.34
RFX4-204ENST00000536688 ZNF702PQ9H963 129 aa6.68□□□□□ -1.34
RFX4-204ENST00000536688 A0A1W2PNM2 257 aa6.67□□□□□ -1.34
RFX4-204ENST00000536688 GYPEP15421 78 aa6.67□□□□□ -1.34
RFX4-204ENST00000536688 MOBPQ13875 183 aa6.67□□□□□ -1.34
RFX4-204ENST00000536688 KHDC1LQ5JSQ8 128 aa6.67□□□□□ -1.34
RFX4-204ENST00000536688 K7EQZ3 153 aa6.66□□□□□ -1.34
RFX4-204ENST00000536688 TNP2Q05952 138 aa6.66□□□□□ -1.34
RFX4-204ENST00000536688 DEFB136Q30KP8 78 aa6.66□□□□□ -1.34
RFX4-204ENST00000536688 DEFB112Q30KQ8 113 aa6.66□□□□□ -1.34
RFX4-204ENST00000536688 Q8N377 158 aa6.66□□□□□ -1.34
RFX4-204ENST00000536688 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
RFX4-204ENST00000536688 LINC01558Q9Y6Z2 57 aa6.66□□□□□ -1.34
RFX4-204ENST00000536688 CR1P17927 2039 aa6.65□□□□□ -1.34
RFX4-204ENST00000536688 WFDC10AQ9H1F0 79 aa6.65□□□□□ -1.34
RFX4-204ENST00000536688 CRYBG3Q68DQ2 2970 aa6.65□□□□□ -1.34
RFX4-204ENST00000536688 ASB16-AS1Q495Z4 193 aa6.64□□□□□ -1.35
RFX4-204ENST00000536688 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
RFX4-204ENST00000536688 CELSR2Q9HCU4 2923 aa6.64□□□□□ -1.35
RFX4-204ENST00000536688 A0A087X002 238 aa6.64□□□□□ -1.35
RFX4-204ENST00000536688 ANGP03950 147 aaKnown RBP6.64□□□□□ -1.35
RFX4-204ENST00000536688 C9orf163Q8N9P6 203 aa6.64□□□□□ -1.35
RFX4-204ENST00000536688 CCL19Q99731 98 aa6.64□□□□□ -1.35
RFX4-204ENST00000536688 PRO0255Q9UI72 69 aa6.64□□□□□ -1.35
RFX4-204ENST00000536688 B4DSR2 109 aa6.63□□□□□ -1.35
RFX4-204ENST00000536688 C1orf137Q5JT78 98 aa6.63□□□□□ -1.35
RFX4-204ENST00000536688 C18orf65Q6ZTR6 163 aa6.63□□□□□ -1.35
RFX4-204ENST00000536688 CENPEQ02224 2701 aa6.63□□□□□ -1.35
RFX4-204ENST00000536688 IGLV10-54A0A075B6I4 117 aa6.62□□□□□ -1.35
RFX4-204ENST00000536688 XAGE1AQ9HD64 81 aa6.62□□□□□ -1.35
RFX4-204ENST00000536688 DHRS4-AS1Q9P1J3 65 aa6.62□□□□□ -1.35
RFX4-204ENST00000536688 IGKV2D-24A0A075B6R9 120 aa6.62□□□□□ -1.35
RFX4-204ENST00000536688 H3BS24 57 aa6.62□□□□□ -1.35
RFX4-204ENST00000536688 CNBPP62633 177 aaKnown RBP6.61□□□□□ -1.35
RFX4-204ENST00000536688 EGFEM1PQ0D2K5 195 aa6.61□□□□□ -1.35
RFX4-204ENST00000536688 COA5Q86WW8 74 aa6.61□□□□□ -1.35
RFX4-204ENST00000536688 KRTAP10-9P60411 292 aa6.61□□□□□ -1.35
RFX4-204ENST00000536688 IGLV7-46A0A075B6I9 117 aa6.6□□□□□ -1.35
RFX4-204ENST00000536688 PRR34Q9NV39 138 aa6.6□□□□□ -1.35
RFX4-204ENST00000536688 ITPR2Q14571 2701 aa6.6□□□□□ -1.35
RFX4-204ENST00000536688 MAP1AP78559 2803 aaPredicted RBP6.6□□□□□ -1.35
RFX4-204ENST00000536688 KRTAP29-1A8MX34 341 aaPredicted RBP6.59□□□□□ -1.35
RFX4-204ENST00000536688 H0Y9P7 68 aa6.59□□□□□ -1.35
RFX4-204ENST00000536688 SETD2Q9BYW2 2564 aaPredicted RBP6.59□□□□□ -1.35
RFX4-204ENST00000536688 DNHD1Q96M86 4753 aa6.59□□□□□ -1.35
RFX4-204ENST00000536688 CASC2Q6XLA1 102 aa6.59□□□□□ -1.35
RFX4-204ENST00000536688 SPG11Q96JI7 2443 aa6.59□□□□□ -1.36
RFX4-204ENST00000536688 PRB2P02812 416 aaPredicted RBP6.58□□□□□ -1.36
RFX4-204ENST00000536688 Q6YL49 198 aa6.58□□□□□ -1.36
RFX4-204ENST00000536688 NOTCH3Q9UM47 2321 aa6.58□□□□□ -1.36
RFX4-204ENST00000536688 SVEP1Q4LDE5 3571 aa6.57□□□□□ -1.36
RFX4-204ENST00000536688 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
RFX4-204ENST00000536688 APCP25054 2843 aa6.57□□□□□ -1.36
RFX4-204ENST00000536688 CSMD2Q7Z408 3487 aa6.56□□□□□ -1.36
RFX4-204ENST00000536688 PLA2G1BP04054 148 aaKnown RBP6.56□□□□□ -1.36
RFX4-204ENST00000536688 DEFB130BP0DP73 79 aa6.56□□□□□ -1.36
RFX4-204ENST00000536688 DEFB130AP0DP74 79 aa6.56□□□□□ -1.36
RFX4-204ENST00000536688 DEFB105AQ8NG35 78 aa6.56□□□□□ -1.36
RFX4-204ENST00000536688 LINC00313P59037 77 aa6.55□□□□□ -1.36
RFX4-204ENST00000536688 MAPK1IP1LQ8NDC0 245 aa6.55□□□□□ -1.36
RFX4-204ENST00000536688 C19orf73Q9NVV2 129 aa6.55□□□□□ -1.36
RFX4-204ENST00000536688 CELSR1Q9NYQ6 3014 aa6.55□□□□□ -1.36
RFX4-204ENST00000536688 NF1P21359 2839 aa6.55□□□□□ -1.36
RFX4-204ENST00000536688 Q6ZRX8 168 aa6.54□□□□□ -1.36
RFX4-204ENST00000536688 PDZD2O15018 2839 aa6.54□□□□□ -1.36
RFX4-204ENST00000536688 VPS13CQ709C8 3753 aa6.54□□□□□ -1.36
RFX4-204ENST00000536688 FSHBP01225 129 aa6.53□□□□□ -1.36
RFX4-204ENST00000536688 CAMK2N2Q96S95 79 aa6.53□□□□□ -1.36
RFX4-204ENST00000536688 AKAP9Q99996 3911 aa6.53□□□□□ -1.36
RFX4-204ENST00000536688 LELP1Q5T871 98 aa6.52□□□□□ -1.36
RFX4-204ENST00000536688 WFDC13Q8IUB5 93 aa6.52□□□□□ -1.36
RFX4-204ENST00000536688 C7orf33Q8WU49 177 aa6.52□□□□□ -1.36
RFX4-204ENST00000536688 F8P00451 2351 aa6.51□□□□□ -1.37
RFX4-204ENST00000536688 A0A096LPF7 62 aa6.51□□□□□ -1.37
RFX4-204ENST00000536688 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
RFX4-204ENST00000536688 CCDC168Q8NDH2 2452 aa6.5□□□□□ -1.37
RFX4-204ENST00000536688 SPRR1AP35321 89 aa6.5□□□□□ -1.37
RFX4-204ENST00000536688 SPINK7P58062 85 aa6.5□□□□□ -1.37
RFX4-204ENST00000536688 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
RFX4-204ENST00000536688 CSPG4Q6UVK1 2322 aa6.5□□□□□ -1.37
RFX4-204ENST00000536688 WFDC10BQ8IUB3 73 aa6.5□□□□□ -1.37
RFX4-204ENST00000536688 SPAG11AQ6PDA7 123 aa6.48□□□□□ -1.37
RFX4-204ENST00000536688 IGLV8-61A0A075B6I0 122 aa6.48□□□□□ -1.37
RFX4-204ENST00000536688 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
RFX4-204ENST00000536688 IGLV1-51P01701 117 aa6.48□□□□□ -1.37
RFX4-204ENST00000536688 OTOGQ6ZRI0 2925 aa6.48□□□□□ -1.37
RFX4-204ENST00000536688 PRR26Q8N8Z3 221 aa6.48□□□□□ -1.37
RFX4-204ENST00000536688 Q8NAQ8 132 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms