RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 JOSD1Q15040 202 aaPredicted RBP13.25□□□□□ -0.29
VPS37C-202ENST00000535818 IGLV6-57P01721 117 aa13.24□□□□□ -0.29
VPS37C-202ENST00000535818 SPRR1AP35321 89 aa13.23□□□□□ -0.29
VPS37C-202ENST00000535818 VAMP8Q9BV40 100 aa13.23□□□□□ -0.29
VPS37C-202ENST00000535818 TRAV23DV6A0A075B6W5 121 aa13.21□□□□□ -0.29
VPS37C-202ENST00000535818 COX8AP10176 69 aa13.21□□□□□ -0.29
VPS37C-202ENST00000535818 CRYGAP11844 174 aa13.21□□□□□ -0.29
VPS37C-202ENST00000535818 OR13C6PQ8NH95 151 aa13.21□□□□□ -0.29
VPS37C-202ENST00000535818 HINT1P49773 126 aaPredicted RBP13.2□□□□□ -0.3
VPS37C-202ENST00000535818 ANAPC11Q9NYG5 84 aa13.2□□□□□ -0.3
VPS37C-202ENST00000535818 A0A087X002 238 aa13.18□□□□□ -0.3
VPS37C-202ENST00000535818 KRTAP4-16G5E9R7 235 aaPredicted RBP13.18□□□□□ -0.3
VPS37C-202ENST00000535818 DLEU1O43261 78 aa13.18□□□□□ -0.3
VPS37C-202ENST00000535818 SPATA45Q537H7 98 aa13.18□□□□□ -0.3
VPS37C-202ENST00000535818 PAM16Q9Y3D7 125 aa13.18□□□□□ -0.3
VPS37C-202ENST00000535818 MUSTN1Q8IVN3 82 aa13.17□□□□□ -0.3
VPS37C-202ENST00000535818 ZNF706Q9Y5V0 76 aaPredicted RBP13.17□□□□□ -0.3
VPS37C-202ENST00000535818 FAM229BQ4G0N7 80 aa13.16□□□□□ -0.3
VPS37C-202ENST00000535818 TYMSOSQ8TAI1 123 aa13.16□□□□□ -0.3
VPS37C-202ENST00000535818 ZNF73O43830 326 aaPredicted RBP13.15□□□□□ -0.3
VPS37C-202ENST00000535818 HMCN2Q8NDA2 5059 aa13.14□□□□□ -0.31
VPS37C-202ENST00000535818 B5MCH6 92 aa13.14□□□□□ -0.31
VPS37C-202ENST00000535818 SMCR5Q8TEV8 140 aa13.13□□□□□ -0.31
VPS37C-202ENST00000535818 TRAV13-2A0A0B4J235 113 aa13.12□□□□□ -0.31
VPS37C-202ENST00000535818 SLC25A34Q6PIV7 304 aa13.12□□□□□ -0.31
VPS37C-202ENST00000535818 Q6ZRX8 168 aa13.12□□□□□ -0.31
VPS37C-202ENST00000535818 SPRR4Q96PI1 79 aa13.12□□□□□ -0.31
VPS37C-202ENST00000535818 HIST1H4GQ99525 98 aa13.11□□□□□ -0.31
VPS37C-202ENST00000535818 A6NDN8 102 aa13.1□□□□□ -0.31
VPS37C-202ENST00000535818 C14orf144Q96I85 54 aa13.1□□□□□ -0.31
VPS37C-202ENST00000535818 KRTAP13-2Q52LG2 175 aa13.09□□□□□ -0.31
VPS37C-202ENST00000535818 PYY3Q5JQD4 70 aa13.09□□□□□ -0.31
VPS37C-202ENST00000535818 HIGD1BQ9P298 99 aa13.08□□□□□ -0.32
VPS37C-202ENST00000535818 Q9BRP9 147 aa13.06□□□□□ -0.32
VPS37C-202ENST00000535818 TRBV7-6A0A0J9YX20 115 aa13.03□□□□□ -0.32
VPS37C-202ENST00000535818 A4D1N5 150 aa13.03□□□□□ -0.32
VPS37C-202ENST00000535818 ERC2-IT1O76042 136 aa13.03□□□□□ -0.32
VPS37C-202ENST00000535818 DHRS4-AS1Q9P1J3 65 aa13.03□□□□□ -0.32
VPS37C-202ENST00000535818 TSPAN13O95857 204 aa13.02□□□□□ -0.33
VPS37C-202ENST00000535818 COX7BP24311 80 aa13.02□□□□□ -0.33
VPS37C-202ENST00000535818 C6orf99Q4VX62 202 aa13.02□□□□□ -0.33
VPS37C-202ENST00000535818 GAGE2AQ6NT46 116 aa13.02□□□□□ -0.33
VPS37C-202ENST00000535818 C3orf22Q8N5N4 141 aa13.02□□□□□ -0.33
VPS37C-202ENST00000535818 LINC00304Q8N9R0 145 aa13□□□□□ -0.33
VPS37C-202ENST00000535818 A0A1B0GWB2 263 aa12.99□□□□□ -0.33
VPS37C-202ENST00000535818 ELOF1P60002 83 aaKnown RBP12.99□□□□□ -0.33
VPS37C-202ENST00000535818 TAL2Q16559 108 aa12.99□□□□□ -0.33
VPS37C-202ENST00000535818 LINC00483Q53H64 154 aa12.97□□□□□ -0.33
VPS37C-202ENST00000535818 TMEM238LA0A1B0GVL6 79 aa12.96□□□□□ -0.33
VPS37C-202ENST00000535818 A6NJY4 79 aa12.96□□□□□ -0.33
VPS37C-202ENST00000535818 VAMP3Q15836 100 aa12.96□□□□□ -0.33
VPS37C-202ENST00000535818 C2orf91Q6ZV80 131 aa12.96□□□□□ -0.33
VPS37C-202ENST00000535818 NHP2Q9NX24 153 aaKnown RBP12.95□□□□□ -0.34
VPS37C-202ENST00000535818 SMIM11BQ8TCY0 68 aa12.94□□□□□ -0.34
VPS37C-202ENST00000535818 PRR4Q16378 134 aa12.92□□□□□ -0.34
VPS37C-202ENST00000535818 RAB37Q96AX2 223 aa12.92□□□□□ -0.34
VPS37C-202ENST00000535818 UQCR10Q9UDW1 63 aa12.92□□□□□ -0.34
VPS37C-202ENST00000535818 IGLV9-49A0A0B4J1Y8 123 aa12.91□□□□□ -0.34
VPS37C-202ENST00000535818 CEND1Q8N111 149 aa12.91□□□□□ -0.34
VPS37C-202ENST00000535818 ST20-AS1Q8NBB2 130 aa12.91□□□□□ -0.34
VPS37C-202ENST00000535818 C12orf57Q99622 126 aa12.9□□□□□ -0.34
VPS37C-202ENST00000535818 A0A0B4J2C4 111 aa12.89□□□□□ -0.35
VPS37C-202ENST00000535818 SLC25A20O43772 301 aa12.89□□□□□ -0.35
VPS37C-202ENST00000535818 CTAG1AP78358 180 aa12.88□□□□□ -0.35
VPS37C-202ENST00000535818 HSD52Q0P140 79 aa12.88□□□□□ -0.35
VPS37C-202ENST00000535818 MOBPQ13875 183 aa12.88□□□□□ -0.35
VPS37C-202ENST00000535818 C4orf48Q5BLP8 95 aa12.88□□□□□ -0.35
VPS37C-202ENST00000535818 Q8NBF4 154 aa12.88□□□□□ -0.35
VPS37C-202ENST00000535818 BVES-AS1Q5T3Y7 98 aa12.87□□□□□ -0.35
VPS37C-202ENST00000535818 SPAG11AQ6PDA7 123 aa12.87□□□□□ -0.35
VPS37C-202ENST00000535818 SMIM6P0DI80 62 aa12.86□□□□□ -0.35
VPS37C-202ENST00000535818 CFC1BP0CG36 223 aa12.85□□□□□ -0.35
VPS37C-202ENST00000535818 CFC1P0CG37 223 aa12.85□□□□□ -0.35
VPS37C-202ENST00000535818 C9orf153Q5TBE3 101 aa12.84□□□□□ -0.35
VPS37C-202ENST00000535818 SPRR1BP22528 89 aa12.82□□□□□ -0.36
VPS37C-202ENST00000535818 SSBP3-AS1Q7Z2R9 100 aa12.82□□□□□ -0.36
VPS37C-202ENST00000535818 RETNLBQ9BQ08 111 aa12.81□□□□□ -0.36
VPS37C-202ENST00000535818 LAMTOR3Q9UHA4 124 aa12.81□□□□□ -0.36
VPS37C-202ENST00000535818 SNCGO76070 127 aa12.8□□□□□ -0.36
VPS37C-202ENST00000535818 DEFB105AQ8NG35 78 aa12.8□□□□□ -0.36
VPS37C-202ENST00000535818 LRP2P98164 4655 aa12.8□□□□□ -0.36
VPS37C-202ENST00000535818 TEX49A0A1B0GTD5 131 aa12.79□□□□□ -0.36
VPS37C-202ENST00000535818 H7C2G1 150 aa12.79□□□□□ -0.36
VPS37C-202ENST00000535818 Q1RN00 199 aa12.79□□□□□ -0.36
VPS37C-202ENST00000535818 PRO1854Q9UHT4 67 aa12.79□□□□□ -0.36
VPS37C-202ENST00000535818 FXYD2P54710 66 aa12.78□□□□□ -0.36
VPS37C-202ENST00000535818 LINC00575Q6W349 94 aa12.78□□□□□ -0.36
VPS37C-202ENST00000535818 hADV29S1A0JD25 119 aa12.76□□□□□ -0.37
VPS37C-202ENST00000535818 SPINK1P00995 79 aa12.76□□□□□ -0.37
VPS37C-202ENST00000535818 UBR4Q5T4S7 5183 aa12.74□□□□□ -0.37
VPS37C-202ENST00000535818 IGLV5-48A0A075B6I7 105 aa12.74□□□□□ -0.37
VPS37C-202ENST00000535818 H0YGX0 51 aa12.74□□□□□ -0.37
VPS37C-202ENST00000535818 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.7□□□□□ -0.38
VPS37C-202ENST00000535818 PRO1933Q9H354 126 aa12.7□□□□□ -0.38
VPS37C-202ENST00000535818 Q6ZQY7 126 aa12.69□□□□□ -0.38
VPS37C-202ENST00000535818 LPAP08519 4548 aa12.69□□□□□ -0.38
VPS37C-202ENST00000535818 TSTD3H0UI37 97 aa12.67□□□□□ -0.38
VPS37C-202ENST00000535818 LINC01547P58512 204 aaPredicted RBP12.67□□□□□ -0.38
VPS37C-202ENST00000535818 RPS29P62273 56 aaKnown RBP12.67□□□□□ -0.38
VPS37C-202ENST00000535818 PPDPFLQ8WWR9 84 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms