RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 PCLOQ9Y6V0 5065 aa7.51□□□□□ -1.21
CHD4-203ENST00000535717 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
CHD4-203ENST00000535717 C22orf24Q9Y442 160 aa7.5□□□□□ -1.21
CHD4-203ENST00000535717 A0A0J9YXY3 114 aa7.49□□□□□ -1.21
CHD4-203ENST00000535717 ZNF815PA8K554 130 aa7.49□□□□□ -1.21
CHD4-203ENST00000535717 KRTAP11-1Q8IUC1 163 aa7.49□□□□□ -1.21
CHD4-203ENST00000535717 MIR7-3HGQ8N6C7 128 aa7.49□□□□□ -1.21
CHD4-203ENST00000535717 SPANXCQ9NY87 97 aa7.49□□□□□ -1.21
CHD4-203ENST00000535717 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
CHD4-203ENST00000535717 IGLV5-37A0A075B6J1 123 aa7.48□□□□□ -1.21
CHD4-203ENST00000535717 RPL13AP40429 203 aaKnown RBP7.48□□□□□ -1.21
CHD4-203ENST00000535717 PRR3P79522 188 aaKnown RBP7.48□□□□□ -1.21
CHD4-203ENST00000535717 Q8NDZ9 215 aa7.48□□□□□ -1.21
CHD4-203ENST00000535717 INAFM2P0DMQ5 153 aa7.47□□□□□ -1.21
CHD4-203ENST00000535717 VPREB1P12018 145 aa7.47□□□□□ -1.21
CHD4-203ENST00000535717 MRPL55Q7Z7F7 128 aaKnown RBP7.47□□□□□ -1.21
CHD4-203ENST00000535717 DAND5Q8N907 189 aa7.47□□□□□ -1.21
CHD4-203ENST00000535717 PSORS1C2Q9UIG4 136 aa7.47□□□□□ -1.21
CHD4-203ENST00000535717 FAM240AA0A1B0GVK7 77 aa7.46□□□□□ -1.22
CHD4-203ENST00000535717 NDUFV3P56181 108 aaKnown RBP7.46□□□□□ -1.22
CHD4-203ENST00000535717 ADAMTSL4-AS1Q5T5F5 129 aa7.46□□□□□ -1.22
CHD4-203ENST00000535717 SCGB1D4Q6XE38 83 aa7.46□□□□□ -1.22
CHD4-203ENST00000535717 TMEM126AQ9H061 195 aa7.46□□□□□ -1.22
CHD4-203ENST00000535717 SS18L2Q9UHA2 77 aa7.46□□□□□ -1.22
CHD4-203ENST00000535717 UBE2BP63146 152 aa7.45□□□□□ -1.22
CHD4-203ENST00000535717 NKAPP1Q8N9T2 125 aa7.45□□□□□ -1.22
CHD4-203ENST00000535717 LINC00167Q96N53 147 aa7.45□□□□□ -1.22
CHD4-203ENST00000535717 LITAFQ99732 161 aa7.45□□□□□ -1.22
CHD4-203ENST00000535717 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
CHD4-203ENST00000535717 A0A0B4J2C4 111 aa7.44□□□□□ -1.22
CHD4-203ENST00000535717 ANKRD29Q8N6D5 301 aa7.44□□□□□ -1.22
CHD4-203ENST00000535717 LOC107984156A0A0G2JMH3 177 aa7.43□□□□□ -1.22
CHD4-203ENST00000535717 RPL37AP8A6NKH3 93 aa7.43□□□□□ -1.22
CHD4-203ENST00000535717 TIMM17BO60830 172 aa7.43□□□□□ -1.22
CHD4-203ENST00000535717 SNCGO76070 127 aa7.43□□□□□ -1.22
CHD4-203ENST00000535717 IFITM1P13164 125 aa7.43□□□□□ -1.22
CHD4-203ENST00000535717 ARL17AQ8IVW1 177 aa7.43□□□□□ -1.22
CHD4-203ENST00000535717 MYCBP2O75592 4640 aa7.43□□□□□ -1.22
CHD4-203ENST00000535717 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
CHD4-203ENST00000535717 TCL1BO95988 128 aa7.42□□□□□ -1.22
CHD4-203ENST00000535717 SCGB1C2P0DMR2 95 aa7.42□□□□□ -1.22
CHD4-203ENST00000535717 C1orf137Q5JT78 98 aa7.42□□□□□ -1.22
CHD4-203ENST00000535717 SOSTDC1Q6X4U4 206 aa7.42□□□□□ -1.22
CHD4-203ENST00000535717 TRBV7-7A0A0K0K1E9 115 aa7.41□□□□□ -1.22
CHD4-203ENST00000535717 SLC25A20O43772 301 aa7.41□□□□□ -1.22
CHD4-203ENST00000535717 PSMB2P49721 201 aa7.41□□□□□ -1.22
CHD4-203ENST00000535717 NPC2P61916 151 aa7.41□□□□□ -1.22
CHD4-203ENST00000535717 SRSF9Q13242 221 aaKnown RBP eCLIP7.41□□□□□ -1.22
CHD4-203ENST00000535717 IMUPQ9GZP8 106 aa7.41□□□□□ -1.22
CHD4-203ENST00000535717 B5MCH6 92 aa7.4□□□□□ -1.22
CHD4-203ENST00000535717 H3BT86 120 aa7.4□□□□□ -1.22
CHD4-203ENST00000535717 M0R378 163 aa7.4□□□□□ -1.22
CHD4-203ENST00000535717 IGLV1-50A0A075B6I6 118 aa7.39□□□□□ -1.23
CHD4-203ENST00000535717 IGKV2-28A0A075B6P5 120 aa7.39□□□□□ -1.23
CHD4-203ENST00000535717 NCR3O14931 201 aa7.39□□□□□ -1.23
CHD4-203ENST00000535717 IGKV2D-28P01615 120 aa7.39□□□□□ -1.23
CHD4-203ENST00000535717 IGLV7-43P04211 117 aa7.39□□□□□ -1.23
CHD4-203ENST00000535717 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
CHD4-203ENST00000535717 PRO1854Q9UHT4 67 aa7.39□□□□□ -1.23
CHD4-203ENST00000535717 ATXN8Q156A1 80 aa7.38□□□□□ -1.23
CHD4-203ENST00000535717 TRBV10-2A0A0K0K1G8 114 aa7.37□□□□□ -1.23
CHD4-203ENST00000535717 NDUFC2O95298 119 aa7.37□□□□□ -1.23
CHD4-203ENST00000535717 CFC1BP0CG36 223 aa7.37□□□□□ -1.23
CHD4-203ENST00000535717 CFC1P0CG37 223 aa7.37□□□□□ -1.23
CHD4-203ENST00000535717 BCE1O60756 84 aa7.36□□□□□ -1.23
CHD4-203ENST00000535717 ACYP1P07311 99 aa7.36□□□□□ -1.23
CHD4-203ENST00000535717 SPINK6Q6UWN8 80 aa7.36□□□□□ -1.23
CHD4-203ENST00000535717 LRP1Q07954 4544 aaKnown RBP7.36□□□□□ -1.23
CHD4-203ENST00000535717 TRBV10-3A0A0K0K1G6 114 aa7.35□□□□□ -1.23
CHD4-203ENST00000535717 A0A1B0GX51 115 aa7.35□□□□□ -1.23
CHD4-203ENST00000535717 CCDC179H3BU77 68 aa7.35□□□□□ -1.23
CHD4-203ENST00000535717 MUSTN1Q8IVN3 82 aa7.35□□□□□ -1.23
CHD4-203ENST00000535717 FAT3Q8TDW7 4589 aa7.35□□□□□ -1.23
CHD4-203ENST00000535717 REG3GQ6UW15 175 aa7.34□□□□□ -1.23
CHD4-203ENST00000535717 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.23
CHD4-203ENST00000535717 COPS9Q8WXC6 57 aa7.33□□□□□ -1.24
CHD4-203ENST00000535717 C9JAW5 83 aa7.32□□□□□ -1.24
CHD4-203ENST00000535717 PRYO14603 147 aa7.32□□□□□ -1.24
CHD4-203ENST00000535717 ZNF861PO60384 105 aa7.32□□□□□ -1.24
CHD4-203ENST00000535717 IGLV6-57P01721 117 aa7.32□□□□□ -1.24
CHD4-203ENST00000535717 DIRC1Q969H9 104 aa7.32□□□□□ -1.24
CHD4-203ENST00000535717 PPDPFQ9H3Y8 114 aa7.32□□□□□ -1.24
CHD4-203ENST00000535717 KCNQ1DNQ9H478 68 aa7.32□□□□□ -1.24
CHD4-203ENST00000535717 H0Y9J4 135 aa7.31□□□□□ -1.24
CHD4-203ENST00000535717 RPL28P46779 137 aaKnown RBP7.31□□□□□ -1.24
CHD4-203ENST00000535717 S100A7L2Q5SY68 101 aa7.31□□□□□ -1.24
CHD4-203ENST00000535717 KRTAP13-1Q8IUC0 172 aa7.31□□□□□ -1.24
CHD4-203ENST00000535717 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
CHD4-203ENST00000535717 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
CHD4-203ENST00000535717 UBE2AP49459 152 aa7.3□□□□□ -1.24
CHD4-203ENST00000535717 RPS28P62857 69 aaKnown RBP7.3□□□□□ -1.24
CHD4-203ENST00000535717 A4D1N5 150 aa7.29□□□□□ -1.24
CHD4-203ENST00000535717 OXTP01178 125 aa7.29□□□□□ -1.24
CHD4-203ENST00000535717 SPRR1AP35321 89 aa7.29□□□□□ -1.24
CHD4-203ENST00000535717 PRLHP81277 87 aa7.29□□□□□ -1.24
CHD4-203ENST00000535717 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
CHD4-203ENST00000535717 FAM19A1Q7Z5A9 133 aa7.29□□□□□ -1.24
CHD4-203ENST00000535717 LINC00337Q8N6G1 96 aa7.29□□□□□ -1.24
CHD4-203ENST00000535717 KRTAP4-16G5E9R7 235 aaPredicted RBP7.28□□□□□ -1.24
CHD4-203ENST00000535717 UQCRQO14949 82 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms