RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 C2orf48Q96LS8 159 aa3.88□□□□□ -1.79
TNFRSF1A-206ENST00000535038 LOC110117498A0A087WWA1 95 aa3.87□□□□□ -1.79
TNFRSF1A-206ENST00000535038 F8WDY8 70 aa3.87□□□□□ -1.79
TNFRSF1A-206ENST00000535038 VPREB1P12018 145 aa3.87□□□□□ -1.79
TNFRSF1A-206ENST00000535038 KPRPQ5T749 579 aaPredicted RBP3.87□□□□□ -1.79
TNFRSF1A-206ENST00000535038 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
TNFRSF1A-206ENST00000535038 SMIM29Q86T20 159 aa3.87□□□□□ -1.79
TNFRSF1A-206ENST00000535038 WFDC10BQ8IUB3 73 aa3.87□□□□□ -1.79
TNFRSF1A-206ENST00000535038 C15orf56Q8N910 161 aa3.87□□□□□ -1.79
TNFRSF1A-206ENST00000535038 TENM3Q9P273 2699 aa3.86□□□□□ -1.79
TNFRSF1A-206ENST00000535038 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
TNFRSF1A-206ENST00000535038 H3BQ85 93 aa3.86□□□□□ -1.79
TNFRSF1A-206ENST00000535038 HTN3P15516 51 aa3.86□□□□□ -1.79
TNFRSF1A-206ENST00000535038 LINC01556Q5JQF7 62 aa3.86□□□□□ -1.79
TNFRSF1A-206ENST00000535038 Q6ZQT0 140 aa3.86□□□□□ -1.79
TNFRSF1A-206ENST00000535038 LINC00526Q96FQ7 95 aa3.86□□□□□ -1.79
TNFRSF1A-206ENST00000535038 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
TNFRSF1A-206ENST00000535038 RETNQ9HD89 108 aa3.86□□□□□ -1.79
TNFRSF1A-206ENST00000535038 TRBV10-3A0A0K0K1G6 114 aa3.85□□□□□ -1.79
TNFRSF1A-206ENST00000535038 hADV29S1A0JD25 119 aa3.85□□□□□ -1.79
TNFRSF1A-206ENST00000535038 ELOF1P60002 83 aaKnown RBP3.85□□□□□ -1.79
TNFRSF1A-206ENST00000535038 ESRGQ1W209 222 aa3.85□□□□□ -1.79
TNFRSF1A-206ENST00000535038 ATP5EP2Q5VTU8 51 aa3.85□□□□□ -1.79
TNFRSF1A-206ENST00000535038 C3orf22Q8N5N4 141 aa3.85□□□□□ -1.79
TNFRSF1A-206ENST00000535038 F8P00451 2351 aa3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 TRAV23DV6A0A075B6W5 121 aa3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 ATOX1O00244 68 aa3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 UQCRQO14949 82 aa3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 COX7CP15954 63 aa3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 RPL18AQ02543 176 aaKnown RBP3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 S100A7L2Q5SY68 101 aa3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 Q6ZRU5 148 aa3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 UPK3BQ9BT76 320 aa3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 SS18L2Q9UHA2 77 aa3.84□□□□□ -1.79
TNFRSF1A-206ENST00000535038 TRBV7-4A0A0J9YYF1 115 aa3.83□□□□□ -1.8
TNFRSF1A-206ENST00000535038 NDUFC2-KCTD14E9PQ53 114 aa3.83□□□□□ -1.8
TNFRSF1A-206ENST00000535038 M0R378 163 aa3.83□□□□□ -1.8
TNFRSF1A-206ENST00000535038 TLX1NBP0CAT3 122 aa3.83□□□□□ -1.8
TNFRSF1A-206ENST00000535038 DNAH10OSP0CZ25 163 aa3.83□□□□□ -1.8
TNFRSF1A-206ENST00000535038 CRYGAP11844 174 aa3.83□□□□□ -1.8
TNFRSF1A-206ENST00000535038 DIRC1Q969H9 104 aa3.83□□□□□ -1.8
TNFRSF1A-206ENST00000535038 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
TNFRSF1A-206ENST00000535038 M0R2N4 97 aa3.82□□□□□ -1.8
TNFRSF1A-206ENST00000535038 ZNF73O43830 326 aaPredicted RBP3.82□□□□□ -1.8
TNFRSF1A-206ENST00000535038 PDE6GP18545 87 aa3.82□□□□□ -1.8
TNFRSF1A-206ENST00000535038 COX7BP24311 80 aa3.82□□□□□ -1.8
TNFRSF1A-206ENST00000535038 Q6ZQY7 126 aa3.82□□□□□ -1.8
TNFRSF1A-206ENST00000535038 CAMK2N2Q96S95 79 aa3.82□□□□□ -1.8
TNFRSF1A-206ENST00000535038 XAGE1AQ9HD64 81 aa3.82□□□□□ -1.8
TNFRSF1A-206ENST00000535038 MAST4O15021 2626 aa3.81□□□□□ -1.8
TNFRSF1A-206ENST00000535038 USP17L23D6RBM5 183 aa3.81□□□□□ -1.8
TNFRSF1A-206ENST00000535038 BCE1O60756 84 aa3.81□□□□□ -1.8
TNFRSF1A-206ENST00000535038 RBM3P98179 157 aaKnown RBP3.81□□□□□ -1.8
TNFRSF1A-206ENST00000535038 HIGD2BQ4VC39 106 aa3.81□□□□□ -1.8
TNFRSF1A-206ENST00000535038 Q6ZRP5 223 aa3.81□□□□□ -1.8
TNFRSF1A-206ENST00000535038 SERP2Q8N6R1 65 aa3.81□□□□□ -1.8
TNFRSF1A-206ENST00000535038 KCNQ1DNQ9H478 68 aa3.81□□□□□ -1.8
TNFRSF1A-206ENST00000535038 VPS13DQ5THJ4 4388 aa3.81□□□□□ -1.8
TNFRSF1A-206ENST00000535038 DNAH10Q8IVF4 4471 aa3.8□□□□□ -1.8
TNFRSF1A-206ENST00000535038 A0A087WVE0 104 aa3.8□□□□□ -1.8
TNFRSF1A-206ENST00000535038 DEFB131BA0A096LNP1 70 aa3.8□□□□□ -1.8
TNFRSF1A-206ENST00000535038 KRTAP4-16G5E9R7 235 aaPredicted RBP3.8□□□□□ -1.8
TNFRSF1A-206ENST00000535038 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
TNFRSF1A-206ENST00000535038 TM2D3Q9BRN9 247 aa3.8□□□□□ -1.8
TNFRSF1A-206ENST00000535038 STAB1Q9NY15 2570 aa3.8□□□□□ -1.8
TNFRSF1A-206ENST00000535038 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
TNFRSF1A-206ENST00000535038 SPRR1AP35321 89 aa3.79□□□□□ -1.8
TNFRSF1A-206ENST00000535038 LINC01547P58512 204 aaPredicted RBP3.79□□□□□ -1.8
TNFRSF1A-206ENST00000535038 SYCNQ0VAF6 134 aa3.79□□□□□ -1.8
TNFRSF1A-206ENST00000535038 C9orf153Q5TBE3 101 aa3.79□□□□□ -1.8
TNFRSF1A-206ENST00000535038 Q6ZVQ6 151 aa3.79□□□□□ -1.8
TNFRSF1A-206ENST00000535038 FAM19A1Q7Z5A9 133 aa3.79□□□□□ -1.8
TNFRSF1A-206ENST00000535038 KRTAP7-1Q8IUC3 87 aa3.79□□□□□ -1.8
TNFRSF1A-206ENST00000535038 C11orf45Q8TAV5 145 aa3.79□□□□□ -1.8
TNFRSF1A-206ENST00000535038 CYSTM1Q9H1C7 97 aa3.79□□□□□ -1.8
TNFRSF1A-206ENST00000535038 CXCL6P80162 114 aa3.78□□□□□ -1.8
TNFRSF1A-206ENST00000535038 SERTAD4-AS1Q5TG53 156 aa3.78□□□□□ -1.8
TNFRSF1A-206ENST00000535038 C3orf56Q8N813 242 aa3.78□□□□□ -1.8
TNFRSF1A-206ENST00000535038 C7orf33Q8WU49 177 aa3.78□□□□□ -1.8
TNFRSF1A-206ENST00000535038 UBL5Q9BZL1 73 aa3.78□□□□□ -1.8
TNFRSF1A-206ENST00000535038 LINC00588Q9Y4M8 146 aa3.78□□□□□ -1.8
TNFRSF1A-206ENST00000535038 DNAH17Q9UFH2 4485 aa3.78□□□□□ -1.8
TNFRSF1A-206ENST00000535038 PLECQ15149 4684 aaKnown RBP3.78□□□□□ -1.8
TNFRSF1A-206ENST00000535038 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
TNFRSF1A-206ENST00000535038 TRAV10A0A0B4J240 114 aa3.77□□□□□ -1.81
TNFRSF1A-206ENST00000535038 DSCR8Q96T75 97 aa3.77□□□□□ -1.81
TNFRSF1A-206ENST00000535038 LAMTOR3Q9UHA4 124 aa3.77□□□□□ -1.81
TNFRSF1A-206ENST00000535038 BAHCC1Q9P281 2608 aa3.76□□□□□ -1.81
TNFRSF1A-206ENST00000535038 DNAH7Q8WXX0 4024 aa3.76□□□□□ -1.81
TNFRSF1A-206ENST00000535038 IGLV5-48A0A075B6I7 105 aa3.76□□□□□ -1.81
TNFRSF1A-206ENST00000535038 CASC10Q5T4H9 136 aa3.76□□□□□ -1.81
TNFRSF1A-206ENST00000535038 MRAPQ8TCY5 172 aa3.76□□□□□ -1.81
TNFRSF1A-206ENST00000535038 FBN1P35555 2871 aaKnown RBP3.76□□□□□ -1.81
TNFRSF1A-206ENST00000535038 FLNBO75369 2602 aaKnown RBP3.75□□□□□ -1.81
TNFRSF1A-206ENST00000535038 DNAH6Q9C0G6 4158 aa3.75□□□□□ -1.81
TNFRSF1A-206ENST00000535038 IGLV1-50A0A075B6I6 118 aa3.75□□□□□ -1.81
TNFRSF1A-206ENST00000535038 K7EIL1 84 aa3.75□□□□□ -1.81
TNFRSF1A-206ENST00000535038 RPS28P62857 69 aaKnown RBP3.75□□□□□ -1.81
TNFRSF1A-206ENST00000535038 Q8N377 158 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms