RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 LINC00483Q53H64 154 aa5.45□□□□□ -1.54
SSBP3-215ENST00000533946 NMUP48645 174 aa5.44□□□□□ -1.54
SSBP3-215ENST00000533946 KRTDAPP60985 99 aa5.44□□□□□ -1.54
SSBP3-215ENST00000533946 MOBPQ13875 183 aa5.44□□□□□ -1.54
SSBP3-215ENST00000533946 Q6ZRX8 168 aa5.44□□□□□ -1.54
SSBP3-215ENST00000533946 LINC00308Q8TCZ7 52 aa5.44□□□□□ -1.54
SSBP3-215ENST00000533946 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
SSBP3-215ENST00000533946 TRBV10-2A0A0K0K1G8 114 aa5.43□□□□□ -1.54
SSBP3-215ENST00000533946 SPANXB1Q9NS25 103 aaPredicted RBP5.43□□□□□ -1.54
SSBP3-215ENST00000533946 TRAV23DV6A0A075B6W5 121 aa5.42□□□□□ -1.54
SSBP3-215ENST00000533946 ZNF815PA8K554 130 aa5.42□□□□□ -1.54
SSBP3-215ENST00000533946 LINC00587B1AMM8 73 aa5.42□□□□□ -1.54
SSBP3-215ENST00000533946 NDUFC2O95298 119 aa5.42□□□□□ -1.54
SSBP3-215ENST00000533946 COA6Q5JTJ3 125 aaKnown RBP5.42□□□□□ -1.54
SSBP3-215ENST00000533946 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
SSBP3-215ENST00000533946 PCP2Q8IVA1 136 aa5.42□□□□□ -1.54
SSBP3-215ENST00000533946 A0A0G2JQZ4 141 aa5.41□□□□□ -1.54
SSBP3-215ENST00000533946 ZNF73O43830 326 aaPredicted RBP5.41□□□□□ -1.54
SSBP3-215ENST00000533946 S100A7L2Q5SY68 101 aa5.41□□□□□ -1.54
SSBP3-215ENST00000533946 KRTAP13-3Q3SY46 172 aa5.4□□□□□ -1.54
SSBP3-215ENST00000533946 MIEN1Q9BRT3 115 aa5.4□□□□□ -1.54
SSBP3-215ENST00000533946 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
SSBP3-215ENST00000533946 OR13C6PQ8NH95 151 aa5.39□□□□□ -1.55
SSBP3-215ENST00000533946 CDIP1Q9H305 208 aa5.39□□□□□ -1.55
SSBP3-215ENST00000533946 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
SSBP3-215ENST00000533946 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
SSBP3-215ENST00000533946 Q8N377 158 aa5.38□□□□□ -1.55
SSBP3-215ENST00000533946 TIMM17BO60830 172 aa5.37□□□□□ -1.55
SSBP3-215ENST00000533946 HRCT1Q6UXD1 115 aa5.37□□□□□ -1.55
SSBP3-215ENST00000533946 SPANXCQ9NY87 97 aa5.37□□□□□ -1.55
SSBP3-215ENST00000533946 C6orf99Q4VX62 202 aa5.36□□□□□ -1.55
SSBP3-215ENST00000533946 SPAG11AQ6PDA7 123 aa5.36□□□□□ -1.55
SSBP3-215ENST00000533946 MUSTN1Q8IVN3 82 aa5.36□□□□□ -1.55
SSBP3-215ENST00000533946 C4orf48Q5BLP8 95 aa5.35□□□□□ -1.55
SSBP3-215ENST00000533946 C9orf153Q5TBE3 101 aa5.35□□□□□ -1.55
SSBP3-215ENST00000533946 HIST3H2BBQ8N257 126 aa5.35□□□□□ -1.55
SSBP3-215ENST00000533946 SPINK1P00995 79 aa5.34□□□□□ -1.55
SSBP3-215ENST00000533946 LINC01547P58512 204 aaPredicted RBP5.34□□□□□ -1.55
SSBP3-215ENST00000533946 DEFB105AQ8NG35 78 aa5.34□□□□□ -1.55
SSBP3-215ENST00000533946 HIST1H2BLQ99880 126 aa5.34□□□□□ -1.55
SSBP3-215ENST00000533946 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
SSBP3-215ENST00000533946 ELOF1P60002 83 aaKnown RBP5.33□□□□□ -1.56
SSBP3-215ENST00000533946 Q1RN00 199 aa5.33□□□□□ -1.56
SSBP3-215ENST00000533946 SSBP3-AS1Q7Z2R9 100 aa5.33□□□□□ -1.56
SSBP3-215ENST00000533946 SMIM29Q86T20 159 aa5.33□□□□□ -1.56
SSBP3-215ENST00000533946 SPRR1BP22528 89 aa5.32□□□□□ -1.56
SSBP3-215ENST00000533946 COX7BP24311 80 aa5.32□□□□□ -1.56
SSBP3-215ENST00000533946 SCGB1D4Q6XE38 83 aa5.32□□□□□ -1.56
SSBP3-215ENST00000533946 H7C2G1 150 aa5.31□□□□□ -1.56
SSBP3-215ENST00000533946 S100A12P80511 92 aa5.31□□□□□ -1.56
SSBP3-215ENST00000533946 FP248Q71RG6 208 aaPredicted RBP5.31□□□□□ -1.56
SSBP3-215ENST00000533946 A6NDN8 102 aa5.3□□□□□ -1.56
SSBP3-215ENST00000533946 JOSD1Q15040 202 aaPredicted RBP5.3□□□□□ -1.56
SSBP3-215ENST00000533946 LINC00518Q8N0U6 118 aa5.3□□□□□ -1.56
SSBP3-215ENST00000533946 SMIM11BQ8TCY0 68 aa5.3□□□□□ -1.56
SSBP3-215ENST00000533946 CTAG1AP78358 180 aa5.29□□□□□ -1.56
SSBP3-215ENST00000533946 XP32Q5T750 250 aa5.29□□□□□ -1.56
SSBP3-215ENST00000533946 C9orf92A6NGG3 77 aa5.28□□□□□ -1.56
SSBP3-215ENST00000533946 SNRPEP62304 92 aaKnown RBP5.28□□□□□ -1.56
SSBP3-215ENST00000533946 ASB16-AS1Q495Z4 193 aa5.28□□□□□ -1.56
SSBP3-215ENST00000533946 C12orf57Q99622 126 aa5.28□□□□□ -1.56
SSBP3-215ENST00000533946 C20orf202A1L168 122 aa5.27□□□□□ -1.57
SSBP3-215ENST00000533946 SLC25A20O43772 301 aa5.27□□□□□ -1.57
SSBP3-215ENST00000533946 TAL2Q16559 108 aa5.27□□□□□ -1.57
SSBP3-215ENST00000533946 LCE2CQ5TA81 110 aa5.27□□□□□ -1.57
SSBP3-215ENST00000533946 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
SSBP3-215ENST00000533946 DHRS4-AS1Q9P1J3 65 aa5.27□□□□□ -1.57
SSBP3-215ENST00000533946 A4D1N5 150 aa5.26□□□□□ -1.57
SSBP3-215ENST00000533946 RPS29P62273 56 aaKnown RBP5.26□□□□□ -1.57
SSBP3-215ENST00000533946 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
SSBP3-215ENST00000533946 IGLV5-48A0A075B6I7 105 aa5.25□□□□□ -1.57
SSBP3-215ENST00000533946 IFITM1P13164 125 aa5.25□□□□□ -1.57
SSBP3-215ENST00000533946 HINT1P49773 126 aaPredicted RBP5.25□□□□□ -1.57
SSBP3-215ENST00000533946 TEX49A0A1B0GTD5 131 aa5.24□□□□□ -1.57
SSBP3-215ENST00000533946 LAMTOR3Q9UHA4 124 aa5.24□□□□□ -1.57
SSBP3-215ENST00000533946 TRBV7-6A0A0J9YX20 115 aa5.23□□□□□ -1.57
SSBP3-215ENST00000533946 A0A1B0GWB2 263 aa5.23□□□□□ -1.57
SSBP3-215ENST00000533946 C5orf52A6NGY3 159 aa5.23□□□□□ -1.57
SSBP3-215ENST00000533946 S100A2P29034 98 aa5.23□□□□□ -1.57
SSBP3-215ENST00000533946 C1orf195Q5TG92 126 aa5.23□□□□□ -1.57
SSBP3-215ENST00000533946 SCGB1D1O95968 90 aa5.22□□□□□ -1.57
SSBP3-215ENST00000533946 PCOTHQ58A44 107 aa5.22□□□□□ -1.57
SSBP3-215ENST00000533946 S100A1P23297 94 aa5.21□□□□□ -1.58
SSBP3-215ENST00000533946 LINC00575Q6W349 94 aa5.21□□□□□ -1.58
SSBP3-215ENST00000533946 Q6ZVH6 145 aa5.21□□□□□ -1.58
SSBP3-215ENST00000533946 C14orf144Q96I85 54 aa5.21□□□□□ -1.58
SSBP3-215ENST00000533946 PRO1933Q9H354 126 aa5.2□□□□□ -1.58
SSBP3-215ENST00000533946 TRAV13-2A0A0B4J235 113 aa5.19□□□□□ -1.58
SSBP3-215ENST00000533946 A0A0U1RQV1 116 aa5.19□□□□□ -1.58
SSBP3-215ENST00000533946 Q6ZQY7 126 aa5.19□□□□□ -1.58
SSBP3-215ENST00000533946 C2orf91Q6ZV80 131 aa5.19□□□□□ -1.58
SSBP3-215ENST00000533946 CBY1Q9Y3M2 126 aa5.19□□□□□ -1.58
SSBP3-215ENST00000533946 S100A6P06703 90 aa5.18□□□□□ -1.58
SSBP3-215ENST00000533946 COX8AP10176 69 aa5.18□□□□□ -1.58
SSBP3-215ENST00000533946 AKR1D1P51857 326 aa5.18□□□□□ -1.58
SSBP3-215ENST00000533946 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
SSBP3-215ENST00000533946 FAM218AQ96MZ4 157 aa5.18□□□□□ -1.58
SSBP3-215ENST00000533946 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
SSBP3-215ENST00000533946 CFC1BP0CG36 223 aa5.17□□□□□ -1.58
SSBP3-215ENST00000533946 CFC1P0CG37 223 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms