RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TCL1BO95988 128 aa5□□□□□ -1.61
CSDE1-215ENST00000533818 DDTP30046 118 aa5□□□□□ -1.61
CSDE1-215ENST00000533818 MRPL54Q6P161 138 aaKnown RBP5□□□□□ -1.61
CSDE1-215ENST00000533818 LINC00299Q6ZSB3 139 aa5□□□□□ -1.61
CSDE1-215ENST00000533818 MPLKIPQ8TAP9 179 aa5□□□□□ -1.61
CSDE1-215ENST00000533818 CST9LQ9H4G1 147 aa5□□□□□ -1.61
CSDE1-215ENST00000533818 KANTRA0A1W2PQU2 76 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 SMIM27A0A1W2PRY6 76 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 G0S2P27469 103 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 AKR1D1P51857 326 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 ZNF345Q14585 488 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 SFTA2Q6UW10 78 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 ERASQ7Z444 233 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 TOMM6Q96B49 74 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 Q96NJ1 140 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 SCGB3A1Q96QR1 104 aa4.99□□□□□ -1.61
CSDE1-215ENST00000533818 K7EMI3 77 aa4.98□□□□□ -1.61
CSDE1-215ENST00000533818 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
CSDE1-215ENST00000533818 SMIM7Q9BQ49 75 aa4.98□□□□□ -1.61
CSDE1-215ENST00000533818 KRTAP4-12Q9BQ66 201 aa4.98□□□□□ -1.61
CSDE1-215ENST00000533818 BATF3Q9NR55 127 aa4.98□□□□□ -1.61
CSDE1-215ENST00000533818 LAMTOR2Q9Y2Q5 125 aa4.98□□□□□ -1.61
CSDE1-215ENST00000533818 ADCYAP1P18509 176 aa4.97□□□□□ -1.61
CSDE1-215ENST00000533818 A0A1B0GXF2 115 aa4.96□□□□□ -1.62
CSDE1-215ENST00000533818 SMLR1H3BR10 107 aa4.96□□□□□ -1.62
CSDE1-215ENST00000533818 HRES1P13985 223 aa4.96□□□□□ -1.62
CSDE1-215ENST00000533818 SMIM13P0DJ93 91 aa4.95□□□□□ -1.62
CSDE1-215ENST00000533818 SPRR2DP22532 72 aa4.94□□□□□ -1.62
CSDE1-215ENST00000533818 IGFL1Q6UW32 110 aa4.94□□□□□ -1.62
CSDE1-215ENST00000533818 MIR7-3HGQ8N6C7 128 aa4.94□□□□□ -1.62
CSDE1-215ENST00000533818 ANAPC16Q96DE5 110 aa4.94□□□□□ -1.62
CSDE1-215ENST00000533818 A8MUU9 505 aa4.93□□□□□ -1.62
CSDE1-215ENST00000533818 NXT2Q9NPJ8 142 aaKnown RBP4.93□□□□□ -1.62
CSDE1-215ENST00000533818 TRBV10-2A0A0K0K1G8 114 aa4.92□□□□□ -1.62
CSDE1-215ENST00000533818 ZNF22P17026 224 aaPredicted RBP4.92□□□□□ -1.62
CSDE1-215ENST00000533818 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
CSDE1-215ENST00000533818 TRAV23DV6A0A075B6W5 121 aa4.91□□□□□ -1.62
CSDE1-215ENST00000533818 KRTAP16-1A8MUX0 517 aa4.91□□□□□ -1.62
CSDE1-215ENST00000533818 ZNF73O43830 326 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-215ENST00000533818 IGLC3P0DOY3 106 aa4.91□□□□□ -1.62
CSDE1-215ENST00000533818 TAL2Q16559 108 aa4.91□□□□□ -1.62
CSDE1-215ENST00000533818 S100A7L2Q5SY68 101 aa4.91□□□□□ -1.62
CSDE1-215ENST00000533818 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
CSDE1-215ENST00000533818 DEFB105AQ8NG35 78 aa4.91□□□□□ -1.62
CSDE1-215ENST00000533818 HINT1P49773 126 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-215ENST00000533818 MEIG1Q5JSS6 88 aa4.9□□□□□ -1.63
CSDE1-215ENST00000533818 MTURNQ8N3F0 131 aa4.9□□□□□ -1.63
CSDE1-215ENST00000533818 NDUFA13Q9P0J0 144 aa4.9□□□□□ -1.63
CSDE1-215ENST00000533818 FA2HQ7L5A8 372 aa4.89□□□□□ -1.63
CSDE1-215ENST00000533818 ANKRD39Q53RE8 183 aa4.88□□□□□ -1.63
CSDE1-215ENST00000533818 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
CSDE1-215ENST00000533818 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
CSDE1-215ENST00000533818 DHRS4-AS1Q9P1J3 65 aa4.88□□□□□ -1.63
CSDE1-215ENST00000533818 MT1BP07438 61 aa4.87□□□□□ -1.63
CSDE1-215ENST00000533818 ADIRFQ15847 76 aa4.87□□□□□ -1.63
CSDE1-215ENST00000533818 NOTCH2NLQ7Z3S9 236 aa4.87□□□□□ -1.63
CSDE1-215ENST00000533818 TEX49A0A1B0GTD5 131 aa4.86□□□□□ -1.63
CSDE1-215ENST00000533818 NDUFA6P56556 154 aa4.86□□□□□ -1.63
CSDE1-215ENST00000533818 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
CSDE1-215ENST00000533818 ATP5L2Q7Z4Y8 100 aa4.86□□□□□ -1.63
CSDE1-215ENST00000533818 SPANXB1Q9NS25 103 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-215ENST00000533818 LINC01549A6NIU2 74 aa4.85□□□□□ -1.63
CSDE1-215ENST00000533818 TMEM170BQ5T4T1 132 aa4.85□□□□□ -1.63
CSDE1-215ENST00000533818 LINC00587B1AMM8 73 aa4.83□□□□□ -1.64
CSDE1-215ENST00000533818 Q5VV11 94 aa4.83□□□□□ -1.64
CSDE1-215ENST00000533818 MAP1LC3CQ9BXW4 147 aa4.83□□□□□ -1.64
CSDE1-215ENST00000533818 C11orf86A6NJI1 115 aa4.81□□□□□ -1.64
CSDE1-215ENST00000533818 SRP19P09132 144 aaKnown RBP4.81□□□□□ -1.64
CSDE1-215ENST00000533818 HERV-K104P63124 156 aa4.81□□□□□ -1.64
CSDE1-215ENST00000533818 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
CSDE1-215ENST00000533818 CBY1Q9Y3M2 126 aa4.79□□□□□ -1.64
CSDE1-215ENST00000533818 NDUFC2O95298 119 aa4.78□□□□□ -1.64
CSDE1-215ENST00000533818 MIEN1Q9BRT3 115 aa4.78□□□□□ -1.64
CSDE1-215ENST00000533818 NAT8Q9UHE5 227 aa4.78□□□□□ -1.64
CSDE1-215ENST00000533818 BLOC1S1P78537 153 aa4.77□□□□□ -1.65
CSDE1-215ENST00000533818 TRBV7-7A0A0K0K1E9 115 aa4.76□□□□□ -1.65
CSDE1-215ENST00000533818 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
CSDE1-215ENST00000533818 COMMD7Q86VX2 200 aa4.76□□□□□ -1.65
CSDE1-215ENST00000533818 TMEM223A0PJW6 202 aa4.75□□□□□ -1.65
CSDE1-215ENST00000533818 LST1O00453 97 aa4.75□□□□□ -1.65
CSDE1-215ENST00000533818 COX7BP24311 80 aa4.75□□□□□ -1.65
CSDE1-215ENST00000533818 LINC01546A6NGU7 62 aa4.74□□□□□ -1.65
CSDE1-215ENST00000533818 SLC51BQ86UW2 128 aa4.74□□□□□ -1.65
CSDE1-215ENST00000533818 BAGE3Q86Y29 109 aa4.74□□□□□ -1.65
CSDE1-215ENST00000533818 IGLV5-48A0A075B6I7 105 aa4.73□□□□□ -1.65
CSDE1-215ENST00000533818 MYMXA0A1B0GTQ4 84 aa4.73□□□□□ -1.65
CSDE1-215ENST00000533818 DSCR10P59022 87 aa4.73□□□□□ -1.65
CSDE1-215ENST00000533818 ELOF1P60002 83 aaKnown RBP4.73□□□□□ -1.65
CSDE1-215ENST00000533818 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
CSDE1-215ENST00000533818 HBDP02042 147 aa4.72□□□□□ -1.65
CSDE1-215ENST00000533818 RHEBQ15382 184 aa4.71□□□□□ -1.66
CSDE1-215ENST00000533818 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
CSDE1-215ENST00000533818 OR13C6PQ8NH95 151 aa4.71□□□□□ -1.66
CSDE1-215ENST00000533818 IMUPQ9GZP8 106 aa4.71□□□□□ -1.66
CSDE1-215ENST00000533818 A0A1W2PNM2 257 aa4.7□□□□□ -1.66
CSDE1-215ENST00000533818 FAM218AQ96MZ4 157 aa4.7□□□□□ -1.66
CSDE1-215ENST00000533818 F8WEM9 126 aa4.69□□□□□ -1.66
CSDE1-215ENST00000533818 SMCO4Q9NRQ5 59 aa4.69□□□□□ -1.66
CSDE1-215ENST00000533818 LINC00310P59036 64 aa4.68□□□□□ -1.66
CSDE1-215ENST00000533818 NPC2P61916 151 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms