RNA–Protein interactions for RNA: ENST00000533072.1

TTC17-212, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best)

Gene TTC17, Length 2,607 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-212ENST00000533072 HERVK_113P61574 105 aa3.25□□□□□ -1.89
TTC17-212ENST00000533072 COX17Q14061 63 aa3.25□□□□□ -1.89
TTC17-212ENST00000533072 C9orf116Q5BN46 136 aaPredicted RBP3.25□□□□□ -1.89
TTC17-212ENST00000533072 KRTAP4-5Q9BYR2 181 aa3.25□□□□□ -1.89
TTC17-212ENST00000533072 A0A1W2PNN7 141 aa3.24□□□□□ -1.89
TTC17-212ENST00000533072 SYS1-DBNDD2H3BUS1 97 aa3.24□□□□□ -1.89
TTC17-212ENST00000533072 J3QQQ9 107 aa3.24□□□□□ -1.89
TTC17-212ENST00000533072 IGKCP01834 107 aa3.24□□□□□ -1.89
TTC17-212ENST00000533072 FAM218AQ96MZ4 157 aa3.24□□□□□ -1.89
TTC17-212ENST00000533072 PAM16Q9Y3D7 125 aa3.24□□□□□ -1.89
TTC17-212ENST00000533072 LEPROTO15243 131 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 PFN2P35080 140 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 ZNF625Q96I27 306 aaPredicted RBP3.23□□□□□ -1.89
TTC17-212ENST00000533072 MYMXA0A1B0GTQ4 84 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 FAM236AA0A1B0GUQ0 79 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 FAM236BA0A1B0GV22 79 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 NMUP48645 174 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 KRTAP10-4P60372 401 aaPredicted RBP3.23□□□□□ -1.89
TTC17-212ENST00000533072 TP73-AS1Q9UF72 201 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 VPS13BQ7Z7G8 4022 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 C9orf129Q5T035 196 aaKnown RBP3.23□□□□□ -1.89
TTC17-212ENST00000533072 LINC01545Q5VT33 79 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 MIEN1Q9BRT3 115 aa3.23□□□□□ -1.89
TTC17-212ENST00000533072 IGLV5-37A0A075B6J1 123 aa3.22□□□□□ -1.89
TTC17-212ENST00000533072 PRR3P79522 188 aaKnown RBP3.22□□□□□ -1.89
TTC17-212ENST00000533072 NDUFA12Q9UI09 145 aa3.22□□□□□ -1.89
TTC17-212ENST00000533072 C3orf79P0CE67 100 aa3.22□□□□□ -1.89
TTC17-212ENST00000533072 SRSF9Q13242 221 aaKnown RBP eCLIP3.22□□□□□ -1.89
TTC17-212ENST00000533072 XAGE1AQ9HD64 81 aa3.22□□□□□ -1.89
TTC17-212ENST00000533072 FAT1Q14517 4588 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 FAM168BA1KXE4 195 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 E9PLD3 99 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 LGALS3P17931 250 aaKnown RBP3.21□□□□□ -1.9
TTC17-212ENST00000533072 LINC00158P58513 81 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 KRTDAPP60985 99 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 PHF5AQ7RTV0 110 aaKnown RBP3.21□□□□□ -1.9
TTC17-212ENST00000533072 PMCHL2Q9BQD1 86 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 A6NDN8 102 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 NDUFS5O43920 106 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 UBE2BP63146 152 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 SND1-IT1Q9HBX3 110 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 C22orf24Q9Y442 160 aa3.21□□□□□ -1.9
TTC17-212ENST00000533072 SPINK6Q6UWN8 80 aa3.2□□□□□ -1.9
TTC17-212ENST00000533072 KRTAP7-1Q8IUC3 87 aa3.2□□□□□ -1.9
TTC17-212ENST00000533072 HIST3H2BBQ8N257 126 aa3.2□□□□□ -1.9
TTC17-212ENST00000533072 NKAPP1Q8N9T2 125 aa3.2□□□□□ -1.9
TTC17-212ENST00000533072 NDUFV3P56181 108 aaKnown RBP3.2□□□□□ -1.9
TTC17-212ENST00000533072 PSORS1C2Q9UIG4 136 aa3.2□□□□□ -1.9
TTC17-212ENST00000533072 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 KRTAP29-1A8MX34 341 aaPredicted RBP3.19□□□□□ -1.9
TTC17-212ENST00000533072 H0Y9J4 135 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 SMIM13P0DJ93 91 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 HNRNPA3P51991 378 aaKnown RBP3.19□□□□□ -1.9
TTC17-212ENST00000533072 SCGB1D4Q6XE38 83 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 SMIM26A0A096LP01 95 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 LOC107984156A0A0G2JMH3 177 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 TSPEAR-AS2P59090 65 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 C1orf137Q5JT78 98 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 ARL17AQ8IVW1 177 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 HIST1H2BLQ99880 126 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
TTC17-212ENST00000533072 TIMM17BO60830 172 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 IGLV7-43P04211 117 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 REG3GQ6UW15 175 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 C3orf22Q8N5N4 141 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 VAMP8Q9BV40 100 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 M0R378 163 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 MIR7-3HGQ8N6C7 128 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 DIRC1Q969H9 104 aa3.18□□□□□ -1.9
TTC17-212ENST00000533072 ABCA13Q86UQ4 5058 aa3.17□□□□□ -1.9
TTC17-212ENST00000533072 IGKV2D-26A0A0A0MRZ7 120 aa3.17□□□□□ -1.9
TTC17-212ENST00000533072 A0A0J9YXY3 114 aa3.17□□□□□ -1.9
TTC17-212ENST00000533072 BCE1O60756 84 aa3.17□□□□□ -1.9
TTC17-212ENST00000533072 COPS9Q8WXC6 57 aa3.17□□□□□ -1.9
TTC17-212ENST00000533072 IGLV1-50A0A075B6I6 118 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 TRBV10-2A0A0K0K1G8 114 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 ZNF815PA8K554 130 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 IFITM1P13164 125 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 RPL28P46779 137 aaKnown RBP3.16□□□□□ -1.9
TTC17-212ENST00000533072 C6orf99Q4VX62 202 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 KRTAP11-1Q8IUC1 163 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 PKHD1L1Q86WI1 4243 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 TRBV20-1A0A075B6N2 111 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 ZNF861PO60384 105 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 MT-ATP8P03928 68 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 Q6Q795 121 aa3.16□□□□□ -1.9
TTC17-212ENST00000533072 SRRM2Q9UQ35 2752 aaKnown RBP3.15□□□□□ -1.9
TTC17-212ENST00000533072 PCLOQ9Y6V0 5065 aa3.15□□□□□ -1.9
TTC17-212ENST00000533072 RPL37AP8A6NKH3 93 aa3.15□□□□□ -1.9
TTC17-212ENST00000533072 PRR15Q8IV56 129 aa3.15□□□□□ -1.91
TTC17-212ENST00000533072 LINC01600Q96MT4 127 aa3.15□□□□□ -1.91
TTC17-212ENST00000533072 UBE2AP49459 152 aa3.14□□□□□ -1.91
TTC17-212ENST00000533072 ATOH7Q8N100 152 aa3.14□□□□□ -1.91
TTC17-212ENST00000533072 IGKV2-28A0A075B6P5 120 aa3.14□□□□□ -1.91
TTC17-212ENST00000533072 IGKV2D-28P01615 120 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms