RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 MUC3AQ02505 3323 aa10.35□□□□□ -0.75
PPFIA1-222ENST00000532504 CASC2Q6XLA1 102 aa10.35□□□□□ -0.75
PPFIA1-222ENST00000532504 ST20-AS1Q8NBB2 130 aa10.35□□□□□ -0.75
PPFIA1-222ENST00000532504 TYMSOSQ8TAI1 123 aa10.35□□□□□ -0.75
PPFIA1-222ENST00000532504 RETNLBQ9BQ08 111 aa10.35□□□□□ -0.75
PPFIA1-222ENST00000532504 VPREB1P12018 145 aa10.34□□□□□ -0.75
PPFIA1-222ENST00000532504 C9orf163Q8N9P6 203 aa10.34□□□□□ -0.75
PPFIA1-222ENST00000532504 BCE1O60756 84 aa10.34□□□□□ -0.75
PPFIA1-222ENST00000532504 Q6ZRX8 168 aa10.34□□□□□ -0.75
PPFIA1-222ENST00000532504 ATP5EP2Q5VTU8 51 aa10.34□□□□□ -0.75
PPFIA1-222ENST00000532504 LIMD2Q9BT23 127 aa10.34□□□□□ -0.75
PPFIA1-222ENST00000532504 MT-ATP8P03928 68 aa10.33□□□□□ -0.76
PPFIA1-222ENST00000532504 ZNF575Q86XF7 245 aa10.32□□□□□ -0.76
PPFIA1-222ENST00000532504 CRYBG3Q68DQ2 2970 aa10.32□□□□□ -0.76
PPFIA1-222ENST00000532504 ELOF1P60002 83 aaKnown RBP10.31□□□□□ -0.76
PPFIA1-222ENST00000532504 FAM30AQ9NZY2 134 aa10.3□□□□□ -0.76
PPFIA1-222ENST00000532504 SMIM20Q8N5G0 67 aa10.3□□□□□ -0.76
PPFIA1-222ENST00000532504 ZANQ9Y493 2812 aa10.3□□□□□ -0.76
PPFIA1-222ENST00000532504 FAM218AQ96MZ4 157 aa10.27□□□□□ -0.76
PPFIA1-222ENST00000532504 C9orf129Q5T035 196 aaKnown RBP10.27□□□□□ -0.77
PPFIA1-222ENST00000532504 TENM4Q6N022 2769 aa10.27□□□□□ -0.77
PPFIA1-222ENST00000532504 LITAFQ99732 161 aa10.26□□□□□ -0.77
PPFIA1-222ENST00000532504 C20orf197Q8N268 126 aa10.25□□□□□ -0.77
PPFIA1-222ENST00000532504 IGLV1-50A0A075B6I6 118 aa10.25□□□□□ -0.77
PPFIA1-222ENST00000532504 A0A1W2PNN7 141 aa10.24□□□□□ -0.77
PPFIA1-222ENST00000532504 EIF4EBP3O60516 100 aaPredicted RBP10.24□□□□□ -0.77
PPFIA1-222ENST00000532504 B5MCH6 92 aa10.23□□□□□ -0.77
PPFIA1-222ENST00000532504 LINC01547P58512 204 aaPredicted RBP10.23□□□□□ -0.77
PPFIA1-222ENST00000532504 TRBV7-6A0A0J9YX20 115 aa10.22□□□□□ -0.77
PPFIA1-222ENST00000532504 CELSR2Q9HCU4 2923 aa10.22□□□□□ -0.77
PPFIA1-222ENST00000532504 Q8NBF4 154 aa10.21□□□□□ -0.77
PPFIA1-222ENST00000532504 IGLV6-57P01721 117 aa10.21□□□□□ -0.77
PPFIA1-222ENST00000532504 CNBPP62633 177 aaKnown RBP10.2□□□□□ -0.78
PPFIA1-222ENST00000532504 PRR4Q16378 134 aa10.2□□□□□ -0.78
PPFIA1-222ENST00000532504 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
PPFIA1-222ENST00000532504 ANAPC11Q9NYG5 84 aa10.19□□□□□ -0.78
PPFIA1-222ENST00000532504 KMT2BQ9UMN6 2715 aaPredicted RBP10.18□□□□□ -0.78
PPFIA1-222ENST00000532504 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
PPFIA1-222ENST00000532504 A0A087WVE0 104 aa10.17□□□□□ -0.78
PPFIA1-222ENST00000532504 PSORS1C2Q9UIG4 136 aa10.17□□□□□ -0.78
PPFIA1-222ENST00000532504 J3KT08 172 aa10.17□□□□□ -0.78
PPFIA1-222ENST00000532504 ZNF861PO60384 105 aa10.17□□□□□ -0.78
PPFIA1-222ENST00000532504 Q6ZVQ6 151 aa10.17□□□□□ -0.78
PPFIA1-222ENST00000532504 KCNQ1DNQ9H478 68 aa10.17□□□□□ -0.78
PPFIA1-222ENST00000532504 Q8N9L7 120 aa10.16□□□□□ -0.78
PPFIA1-222ENST00000532504 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
PPFIA1-222ENST00000532504 TLX1NBP0CAT3 122 aa10.16□□□□□ -0.78
PPFIA1-222ENST00000532504 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
PPFIA1-222ENST00000532504 FAM236DA0A1B0GTK5 79 aa10.14□□□□□ -0.79
PPFIA1-222ENST00000532504 FAM236CP0DP71 79 aa10.14□□□□□ -0.79
PPFIA1-222ENST00000532504 SNURFQ9Y675 71 aa10.14□□□□□ -0.79
PPFIA1-222ENST00000532504 RELNP78509 3460 aa10.14□□□□□ -0.79
PPFIA1-222ENST00000532504 STAB2Q8WWQ8 2551 aa10.12□□□□□ -0.79
PPFIA1-222ENST00000532504 LAMA5O15230 3695 aa10.12□□□□□ -0.79
PPFIA1-222ENST00000532504 SEC61GP60059 68 aa10.12□□□□□ -0.79
PPFIA1-222ENST00000532504 IGLV7-43P04211 117 aa10.11□□□□□ -0.79
PPFIA1-222ENST00000532504 TMEM258P61165 79 aa10.1□□□□□ -0.79
PPFIA1-222ENST00000532504 DMDP11532 3685 aa10.1□□□□□ -0.79
PPFIA1-222ENST00000532504 LINC00208Q96KT6 92 aa10.1□□□□□ -0.79
PPFIA1-222ENST00000532504 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
PPFIA1-222ENST00000532504 FAM240AA0A1B0GVK7 77 aa10.1□□□□□ -0.79
PPFIA1-222ENST00000532504 HRNRQ86YZ3 2850 aaPredicted RBP10.09□□□□□ -0.79
PPFIA1-222ENST00000532504 DCHS1Q96JQ0 3298 aa10.09□□□□□ -0.79
PPFIA1-222ENST00000532504 HCG22E2RYF7 251 aa10.09□□□□□ -0.79
PPFIA1-222ENST00000532504 KRTAP1-5Q9BYS1 174 aa10.09□□□□□ -0.79
PPFIA1-222ENST00000532504 LCE6AA0A183 80 aa10.08□□□□□ -0.8
PPFIA1-222ENST00000532504 LINC00304Q8N9R0 145 aa10.06□□□□□ -0.8
PPFIA1-222ENST00000532504 ASPMQ8IZT6 3477 aa10.06□□□□□ -0.8
PPFIA1-222ENST00000532504 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
PPFIA1-222ENST00000532504 A0A0G2JQZ4 141 aa10.05□□□□□ -0.8
PPFIA1-222ENST00000532504 IGKV2-30P06310 120 aa10.05□□□□□ -0.8
PPFIA1-222ENST00000532504 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
PPFIA1-222ENST00000532504 PLA2G2DQ9UNK4 145 aa10.05□□□□□ -0.8
PPFIA1-222ENST00000532504 PCOTHQ58A44 107 aa10.04□□□□□ -0.8
PPFIA1-222ENST00000532504 Q6Q795 121 aa10.04□□□□□ -0.8
PPFIA1-222ENST00000532504 ASH1LQ9NR48 2969 aaKnown RBP10.03□□□□□ -0.8
PPFIA1-222ENST00000532504 SERP2Q8N6R1 65 aa10.03□□□□□ -0.8
PPFIA1-222ENST00000532504 DCHS2Q6V1P9 2916 aa10.02□□□□□ -0.8
PPFIA1-222ENST00000532504 UQCRQO14949 82 aa10.02□□□□□ -0.81
PPFIA1-222ENST00000532504 ERC2-IT1O76042 136 aa10.02□□□□□ -0.81
PPFIA1-222ENST00000532504 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
PPFIA1-222ENST00000532504 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
PPFIA1-222ENST00000532504 Q6ZQT0 140 aa10.01□□□□□ -0.81
PPFIA1-222ENST00000532504 Q96NJ1 140 aa10□□□□□ -0.81
PPFIA1-222ENST00000532504 KRTAP21-3Q3LHN1 58 aa10□□□□□ -0.81
PPFIA1-222ENST00000532504 LINC00313P59037 77 aa9.99□□□□□ -0.81
PPFIA1-222ENST00000532504 CDIP1Q9H305 208 aa9.99□□□□□ -0.81
PPFIA1-222ENST00000532504 NF1P21359 2839 aa9.98□□□□□ -0.81
PPFIA1-222ENST00000532504 hDV103S1A0JD37 113 aa9.98□□□□□ -0.81
PPFIA1-222ENST00000532504 Q8N377 158 aa9.97□□□□□ -0.81
PPFIA1-222ENST00000532504 H0Y9P7 68 aa9.97□□□□□ -0.81
PPFIA1-222ENST00000532504 IGFL1Q6UW32 110 aa9.97□□□□□ -0.81
PPFIA1-222ENST00000532504 SPINK1P00995 79 aa9.97□□□□□ -0.81
PPFIA1-222ENST00000532504 SSBP3-AS1Q7Z2R9 100 aa9.97□□□□□ -0.81
PPFIA1-222ENST00000532504 SPRR4Q96PI1 79 aa9.95□□□□□ -0.82
PPFIA1-222ENST00000532504 WDFY3Q8IZQ1 3526 aa9.95□□□□□ -0.82
PPFIA1-222ENST00000532504 C9orf92A6NGG3 77 aa9.94□□□□□ -0.82
PPFIA1-222ENST00000532504 SMIM29Q86T20 159 aa9.94□□□□□ -0.82
PPFIA1-222ENST00000532504 LOC110117498A0A087WWA1 95 aa9.93□□□□□ -0.82
PPFIA1-222ENST00000532504 TRBV7-4A0A0J9YYF1 115 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms