RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 FAM229BQ4G0N7 80 aa8.2□□□□□ -1.1
TSPAN4-220ENST00000532375 S100A7L2Q5SY68 101 aa8.2□□□□□ -1.1
TSPAN4-220ENST00000532375 Q9BRP9 147 aa8.2□□□□□ -1.1
TSPAN4-220ENST00000532375 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
TSPAN4-220ENST00000532375 CRYGAP11844 174 aa8.19□□□□□ -1.1
TSPAN4-220ENST00000532375 IFITM1P13164 125 aa8.19□□□□□ -1.1
TSPAN4-220ENST00000532375 Q6ZVH6 145 aa8.19□□□□□ -1.1
TSPAN4-220ENST00000532375 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
TSPAN4-220ENST00000532375 SPRR4Q96PI1 79 aa8.19□□□□□ -1.1
TSPAN4-220ENST00000532375 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
TSPAN4-220ENST00000532375 ERC2-IT1O76042 136 aa8.18□□□□□ -1.1
TSPAN4-220ENST00000532375 Q6ZRX8 168 aa8.18□□□□□ -1.1
TSPAN4-220ENST00000532375 HSBP1L1C9JCN9 74 aa8.17□□□□□ -1.1
TSPAN4-220ENST00000532375 ZNF73O43830 326 aaPredicted RBP8.17□□□□□ -1.1
TSPAN4-220ENST00000532375 LINC00518Q8N0U6 118 aa8.17□□□□□ -1.1
TSPAN4-220ENST00000532375 S100A12P80511 92 aa8.16□□□□□ -1.1
TSPAN4-220ENST00000532375 JOSD1Q15040 202 aaPredicted RBP8.16□□□□□ -1.1
TSPAN4-220ENST00000532375 LRP2P98164 4655 aa8.15□□□□□ -1.1
TSPAN4-220ENST00000532375 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.1
TSPAN4-220ENST00000532375 COX8AP10176 69 aa8.14□□□□□ -1.11
TSPAN4-220ENST00000532375 OR13C6PQ8NH95 151 aa8.14□□□□□ -1.11
TSPAN4-220ENST00000532375 DLEU1O43261 78 aa8.13□□□□□ -1.11
TSPAN4-220ENST00000532375 LINC00483Q53H64 154 aa8.13□□□□□ -1.11
TSPAN4-220ENST00000532375 C3orf22Q8N5N4 141 aa8.13□□□□□ -1.11
TSPAN4-220ENST00000532375 COPS9Q8WXC6 57 aa8.12□□□□□ -1.11
TSPAN4-220ENST00000532375 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
TSPAN4-220ENST00000532375 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
TSPAN4-220ENST00000532375 LPAP08519 4548 aa8.1□□□□□ -1.11
TSPAN4-220ENST00000532375 C14orf144Q96I85 54 aa8.1□□□□□ -1.11
TSPAN4-220ENST00000532375 C6orf99Q4VX62 202 aa8.09□□□□□ -1.11
TSPAN4-220ENST00000532375 PYY3Q5JQD4 70 aa8.09□□□□□ -1.11
TSPAN4-220ENST00000532375 PAM16Q9Y3D7 125 aa8.09□□□□□ -1.11
TSPAN4-220ENST00000532375 A4D1N5 150 aa8.08□□□□□ -1.12
TSPAN4-220ENST00000532375 ELOF1P60002 83 aaKnown RBP8.08□□□□□ -1.12
TSPAN4-220ENST00000532375 SPATA45Q537H7 98 aa8.08□□□□□ -1.12
TSPAN4-220ENST00000532375 GAGE2AQ6NT46 116 aa8.08□□□□□ -1.12
TSPAN4-220ENST00000532375 ST20-AS1Q8NBB2 130 aa8.08□□□□□ -1.12
TSPAN4-220ENST00000532375 TMA7Q9Y2S6 64 aaKnown RBP8.08□□□□□ -1.12
TSPAN4-220ENST00000532375 TRBV7-6A0A0J9YX20 115 aa8.07□□□□□ -1.12
TSPAN4-220ENST00000532375 A6NDN8 102 aa8.07□□□□□ -1.12
TSPAN4-220ENST00000532375 TSPAN13O95857 204 aa8.07□□□□□ -1.12
TSPAN4-220ENST00000532375 C2orf91Q6ZV80 131 aa8.07□□□□□ -1.12
TSPAN4-220ENST00000532375 TRAV13-2A0A0B4J235 113 aa8.06□□□□□ -1.12
TSPAN4-220ENST00000532375 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
TSPAN4-220ENST00000532375 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
TSPAN4-220ENST00000532375 VAMP8Q9BV40 100 aa8.06□□□□□ -1.12
TSPAN4-220ENST00000532375 HIGD1BQ9P298 99 aa8.06□□□□□ -1.12
TSPAN4-220ENST00000532375 COX7BP24311 80 aa8.05□□□□□ -1.12
TSPAN4-220ENST00000532375 SMIM11BQ8TCY0 68 aa8.05□□□□□ -1.12
TSPAN4-220ENST00000532375 SPRR1BP22528 89 aa8.04□□□□□ -1.12
TSPAN4-220ENST00000532375 DHRS4-AS1Q9P1J3 65 aa8.04□□□□□ -1.12
TSPAN4-220ENST00000532375 SLC25A34Q6PIV7 304 aa8.03□□□□□ -1.12
TSPAN4-220ENST00000532375 HIST1H4GQ99525 98 aa8.03□□□□□ -1.12
TSPAN4-220ENST00000532375 A0A1B0GWB2 263 aa8.02□□□□□ -1.13
TSPAN4-220ENST00000532375 CTAG1AP78358 180 aa8.02□□□□□ -1.13
TSPAN4-220ENST00000532375 Q8NBF4 154 aa8.01□□□□□ -1.13
TSPAN4-220ENST00000532375 LINC01547P58512 204 aaPredicted RBP8□□□□□ -1.13
TSPAN4-220ENST00000532375 SPAG11AQ6PDA7 123 aa7.99□□□□□ -1.13
TSPAN4-220ENST00000532375 SSBP3-AS1Q7Z2R9 100 aa7.99□□□□□ -1.13
TSPAN4-220ENST00000532375 IGLV9-49A0A0B4J1Y8 123 aa7.98□□□□□ -1.13
TSPAN4-220ENST00000532375 CFC1BP0CG36 223 aa7.98□□□□□ -1.13
TSPAN4-220ENST00000532375 CFC1P0CG37 223 aa7.98□□□□□ -1.13
TSPAN4-220ENST00000532375 MOBPQ13875 183 aa7.98□□□□□ -1.13
TSPAN4-220ENST00000532375 C12orf57Q99622 126 aa7.98□□□□□ -1.13
TSPAN4-220ENST00000532375 IGLV5-48A0A075B6I7 105 aa7.96□□□□□ -1.14
TSPAN4-220ENST00000532375 PRR4Q16378 134 aa7.96□□□□□ -1.14
TSPAN4-220ENST00000532375 TAL2Q16559 108 aa7.96□□□□□ -1.14
TSPAN4-220ENST00000532375 SMIM29Q86T20 159 aa7.96□□□□□ -1.14
TSPAN4-220ENST00000532375 RETNLBQ9BQ08 111 aa7.96□□□□□ -1.14
TSPAN4-220ENST00000532375 LINC00575Q6W349 94 aa7.95□□□□□ -1.14
TSPAN4-220ENST00000532375 CEND1Q8N111 149 aa7.95□□□□□ -1.14
TSPAN4-220ENST00000532375 A0A0B4J2C4 111 aa7.93□□□□□ -1.14
TSPAN4-220ENST00000532375 TEX49A0A1B0GTD5 131 aa7.93□□□□□ -1.14
TSPAN4-220ENST00000532375 SPINK1P00995 79 aa7.93□□□□□ -1.14
TSPAN4-220ENST00000532375 FXYD2P54710 66 aa7.93□□□□□ -1.14
TSPAN4-220ENST00000532375 Q8N377 158 aa7.93□□□□□ -1.14
TSPAN4-220ENST00000532375 DEFB105AQ8NG35 78 aa7.93□□□□□ -1.14
TSPAN4-220ENST00000532375 VAMP3Q15836 100 aa7.92□□□□□ -1.14
TSPAN4-220ENST00000532375 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
TSPAN4-220ENST00000532375 RPS29P62273 56 aaKnown RBP7.91□□□□□ -1.14
TSPAN4-220ENST00000532375 LAMTOR3Q9UHA4 124 aa7.91□□□□□ -1.14
TSPAN4-220ENST00000532375 Q1RN00 199 aa7.9□□□□□ -1.14
TSPAN4-220ENST00000532375 C9orf153Q5TBE3 101 aa7.9□□□□□ -1.14
TSPAN4-220ENST00000532375 NHP2Q9NX24 153 aaKnown RBP7.9□□□□□ -1.14
TSPAN4-220ENST00000532375 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
TSPAN4-220ENST00000532375 hADV29S1A0JD25 119 aa7.88□□□□□ -1.15
TSPAN4-220ENST00000532375 RAB37Q96AX2 223 aa7.88□□□□□ -1.15
TSPAN4-220ENST00000532375 UQCR10Q9UDW1 63 aa7.88□□□□□ -1.15
TSPAN4-220ENST00000532375 H7C2G1 150 aa7.87□□□□□ -1.15
TSPAN4-220ENST00000532375 HSD52Q0P140 79 aa7.87□□□□□ -1.15
TSPAN4-220ENST00000532375 BVES-AS1Q5T3Y7 98 aa7.87□□□□□ -1.15
TSPAN4-220ENST00000532375 PRO1854Q9UHT4 67 aa7.87□□□□□ -1.15
TSPAN4-220ENST00000532375 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
TSPAN4-220ENST00000532375 SLC25A20O43772 301 aa7.86□□□□□ -1.15
TSPAN4-220ENST00000532375 Q6ZQY7 126 aa7.86□□□□□ -1.15
TSPAN4-220ENST00000532375 FAM218AQ96MZ4 157 aa7.85□□□□□ -1.15
TSPAN4-220ENST00000532375 A0A0G2JQZ4 141 aa7.84□□□□□ -1.15
TSPAN4-220ENST00000532375 TMEM238LA0A1B0GVL6 79 aa7.84□□□□□ -1.15
TSPAN4-220ENST00000532375 A6NJY4 79 aa7.84□□□□□ -1.15
TSPAN4-220ENST00000532375 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms