RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TRBV7-4A0A0J9YYF1 115 aa7.45□□□□□ -1.22
PTPRK-221ENST00000532331 IGLV1-50A0A075B6I6 118 aa7.45□□□□□ -1.22
PTPRK-221ENST00000532331 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
PTPRK-221ENST00000532331 C15orf56Q8N910 161 aa7.45□□□□□ -1.22
PTPRK-221ENST00000532331 HTTP42858 3142 aa7.44□□□□□ -1.22
PTPRK-221ENST00000532331 ATP11AUNQ6ZP68 121 aa7.44□□□□□ -1.22
PTPRK-221ENST00000532331 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
PTPRK-221ENST00000532331 LINC00304Q8N9R0 145 aa7.43□□□□□ -1.22
PTPRK-221ENST00000532331 LINC00528Q8N1L1 170 aa7.43□□□□□ -1.22
PTPRK-221ENST00000532331 C5orf42Q9H799 3197 aa7.43□□□□□ -1.22
PTPRK-221ENST00000532331 MAST4O15021 2626 aa7.43□□□□□ -1.22
PTPRK-221ENST00000532331 TRAV22A0A0B4J277 110 aa7.42□□□□□ -1.22
PTPRK-221ENST00000532331 WIPF1O43516 503 aa7.42□□□□□ -1.22
PTPRK-221ENST00000532331 ZNF861PO60384 105 aa7.42□□□□□ -1.22
PTPRK-221ENST00000532331 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
PTPRK-221ENST00000532331 ATRQ13535 2644 aa7.42□□□□□ -1.22
PTPRK-221ENST00000532331 A0A1B0GU69 56 aa7.41□□□□□ -1.22
PTPRK-221ENST00000532331 RANBP2P49792 3224 aaKnown RBP7.41□□□□□ -1.22
PTPRK-221ENST00000532331 C8orf87E5RJ46 101 aa7.4□□□□□ -1.22
PTPRK-221ENST00000532331 Q96NJ1 140 aa7.4□□□□□ -1.22
PTPRK-221ENST00000532331 TNP2Q05952 138 aa7.4□□□□□ -1.23
PTPRK-221ENST00000532331 COX6B2Q6YFQ2 88 aa7.4□□□□□ -1.23
PTPRK-221ENST00000532331 A8MWP4 228 aa7.39□□□□□ -1.23
PTPRK-221ENST00000532331 ZNF292O60281 2723 aa7.39□□□□□ -1.23
PTPRK-221ENST00000532331 CNBPP62633 177 aaKnown RBP7.37□□□□□ -1.23
PTPRK-221ENST00000532331 PCNTO95613 3336 aa7.37□□□□□ -1.23
PTPRK-221ENST00000532331 IGLV7-43P04211 117 aa7.37□□□□□ -1.23
PTPRK-221ENST00000532331 CR1P17927 2039 aa7.36□□□□□ -1.23
PTPRK-221ENST00000532331 TLX1NBP0CAT3 122 aa7.36□□□□□ -1.23
PTPRK-221ENST00000532331 BAHCC1Q9P281 2608 aa7.36□□□□□ -1.23
PTPRK-221ENST00000532331 SSBP3-AS1Q7Z2R9 100 aa7.36□□□□□ -1.23
PTPRK-221ENST00000532331 LOC101927531A0A1B0GV80 90 aa7.35□□□□□ -1.23
PTPRK-221ENST00000532331 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
PTPRK-221ENST00000532331 MRPL34Q9BQ48 92 aaKnown RBP7.35□□□□□ -1.23
PTPRK-221ENST00000532331 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
PTPRK-221ENST00000532331 PLA2G2DQ9UNK4 145 aa7.34□□□□□ -1.23
PTPRK-221ENST00000532331 K7EQZ3 153 aa7.34□□□□□ -1.23
PTPRK-221ENST00000532331 IGFL1Q6UW32 110 aa7.33□□□□□ -1.24
PTPRK-221ENST00000532331 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
PTPRK-221ENST00000532331 TRANK1O15050 2925 aa7.32□□□□□ -1.24
PTPRK-221ENST00000532331 A0A1W2PNN7 141 aa7.31□□□□□ -1.24
PTPRK-221ENST00000532331 CENPEQ02224 2701 aa7.3□□□□□ -1.24
PTPRK-221ENST00000532331 Q8N377 158 aa7.29□□□□□ -1.24
PTPRK-221ENST00000532331 RPS28P62857 69 aaKnown RBP7.29□□□□□ -1.24
PTPRK-221ENST00000532331 BPTFQ12830 3046 aa7.28□□□□□ -1.24
PTPRK-221ENST00000532331 TEP1Q99973 2627 aaKnown RBP7.28□□□□□ -1.24
PTPRK-221ENST00000532331 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
PTPRK-221ENST00000532331 ERC2-IT1O76042 136 aa7.28□□□□□ -1.24
PTPRK-221ENST00000532331 PRR15Q8IV56 129 aa7.27□□□□□ -1.25
PTPRK-221ENST00000532331 C8orf17Q9NRJ1 99 aa7.27□□□□□ -1.25
PTPRK-221ENST00000532331 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
PTPRK-221ENST00000532331 LAMA3Q16787 3333 aa7.27□□□□□ -1.25
PTPRK-221ENST00000532331 SETXQ7Z333 2677 aaKnown RBP7.27□□□□□ -1.25
PTPRK-221ENST00000532331 DSCR10P59022 87 aa7.27□□□□□ -1.25
PTPRK-221ENST00000532331 LCE6AA0A183 80 aa7.26□□□□□ -1.25
PTPRK-221ENST00000532331 A0A1B0GVX0 72 aa7.25□□□□□ -1.25
PTPRK-221ENST00000532331 MKI67P46013 3256 aaKnown RBP7.25□□□□□ -1.25
PTPRK-221ENST00000532331 PRO0628Q9UI54 55 aa7.24□□□□□ -1.25
PTPRK-221ENST00000532331 SPRR4Q96PI1 79 aa7.23□□□□□ -1.25
PTPRK-221ENST00000532331 OBSCN-AS1Q96MR7 158 aa7.23□□□□□ -1.25
PTPRK-221ENST00000532331 IGLV8-61A0A075B6I0 122 aa7.22□□□□□ -1.25
PTPRK-221ENST00000532331 A0A0G2JQZ4 141 aa7.21□□□□□ -1.26
PTPRK-221ENST00000532331 COA5Q86WW8 74 aa7.2□□□□□ -1.26
PTPRK-221ENST00000532331 C4orf26Q17RF5 130 aa7.2□□□□□ -1.26
PTPRK-221ENST00000532331 MGAQ8IWI9 3026 aa7.2□□□□□ -1.26
PTPRK-221ENST00000532331 IGSF10Q6WRI0 2623 aa7.2□□□□□ -1.26
PTPRK-221ENST00000532331 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
PTPRK-221ENST00000532331 UNC79Q9P2D8 2635 aa7.18□□□□□ -1.26
PTPRK-221ENST00000532331 IGLV5-37A0A075B6J1 123 aa7.18□□□□□ -1.26
PTPRK-221ENST00000532331 AKAP13Q12802 2813 aa7.18□□□□□ -1.26
PTPRK-221ENST00000532331 LINC01600Q96MT4 127 aa7.16□□□□□ -1.26
PTPRK-221ENST00000532331 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
PTPRK-221ENST00000532331 COL6A5A8TX70 2615 aa7.15□□□□□ -1.27
PTPRK-221ENST00000532331 PRR26Q8N8Z3 221 aa7.14□□□□□ -1.27
PTPRK-221ENST00000532331 TEX15Q9BXT5 2789 aa7.14□□□□□ -1.27
PTPRK-221ENST00000532331 A0A1W2PNM2 257 aa7.14□□□□□ -1.27
PTPRK-221ENST00000532331 KLKP1Q107X0 134 aa7.14□□□□□ -1.27
PTPRK-221ENST00000532331 KRTAP21-3Q3LHN1 58 aa7.14□□□□□ -1.27
PTPRK-221ENST00000532331 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
PTPRK-221ENST00000532331 BRCA2P51587 3418 aa7.12□□□□□ -1.27
PTPRK-221ENST00000532331 STAB1Q9NY15 2570 aa7.12□□□□□ -1.27
PTPRK-221ENST00000532331 DSPP15924 2871 aaKnown RBP7.12□□□□□ -1.27
PTPRK-221ENST00000532331 CYP4F30PQ9H0H9 118 aa7.12□□□□□ -1.27
PTPRK-221ENST00000532331 UQCR11O14957 56 aa7.12□□□□□ -1.27
PTPRK-221ENST00000532331 PLAC8Q9NZF1 115 aa7.11□□□□□ -1.27
PTPRK-221ENST00000532331 PRUNE2Q8WUY3 3088 aa7.11□□□□□ -1.27
PTPRK-221ENST00000532331 Q5VSD8 79 aa7.11□□□□□ -1.27
PTPRK-221ENST00000532331 A8MUN3 132 aa7.1□□□□□ -1.27
PTPRK-221ENST00000532331 IGLV5-48A0A075B6I7 105 aa7.1□□□□□ -1.27
PTPRK-221ENST00000532331 Q6ZSA8 131 aa7.09□□□□□ -1.27
PTPRK-221ENST00000532331 FAM229BQ4G0N7 80 aa7.07□□□□□ -1.28
PTPRK-221ENST00000532331 CD164Q04900 197 aa7.06□□□□□ -1.28
PTPRK-221ENST00000532331 A0A0C4DFX4 3053 aa7.06□□□□□ -1.28
PTPRK-221ENST00000532331 GCN1Q92616 2671 aaKnown RBP7.05□□□□□ -1.28
PTPRK-221ENST00000532331 KRTAP1-5Q9BYS1 174 aa7.04□□□□□ -1.28
PTPRK-221ENST00000532331 H7BZZ5 65 aa7.04□□□□□ -1.28
PTPRK-221ENST00000532331 CHD6Q8TD26 2715 aa7.04□□□□□ -1.28
PTPRK-221ENST00000532331 MIR22HGQ0VDD5 57 aa7.04□□□□□ -1.28
PTPRK-221ENST00000532331 WDFY4Q6ZS81 3184 aa7.04□□□□□ -1.28
PTPRK-221ENST00000532331 FAM104AQ969W3 186 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms