RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 ANKRD39Q53RE8 183 aa13.39□□□□□ -0.27
CAPN1-222ENST00000532285 Q6ZRX8 168 aa13.39□□□□□ -0.27
CAPN1-222ENST00000532285 ATOH7Q8N100 152 aa13.39□□□□□ -0.27
CAPN1-222ENST00000532285 C3orf22Q8N5N4 141 aa13.39□□□□□ -0.27
CAPN1-222ENST00000532285 CBY1Q9Y3M2 126 aa13.39□□□□□ -0.27
CAPN1-222ENST00000532285 HIST3H2BBQ8N257 126 aa13.38□□□□□ -0.27
CAPN1-222ENST00000532285 LPAP08519 4548 aa13.38□□□□□ -0.27
CAPN1-222ENST00000532285 S100A2P29034 98 aa13.37□□□□□ -0.27
CAPN1-222ENST00000532285 SCGB1D4Q6XE38 83 aa13.37□□□□□ -0.27
CAPN1-222ENST00000532285 ZNF73O43830 326 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-222ENST00000532285 CTAG1AP78358 180 aa13.35□□□□□ -0.27
CAPN1-222ENST00000532285 JOSD1Q15040 202 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-222ENST00000532285 HIST1H2BLQ99880 126 aa13.35□□□□□ -0.27
CAPN1-222ENST00000532285 Q9BRP9 147 aa13.35□□□□□ -0.27
CAPN1-222ENST00000532285 SNRPEP62304 92 aaKnown RBP13.34□□□□□ -0.27
CAPN1-222ENST00000532285 OR13C6PQ8NH95 151 aa13.34□□□□□ -0.27
CAPN1-222ENST00000532285 SPANXDQ9BXN6 97 aa13.34□□□□□ -0.27
CAPN1-222ENST00000532285 ERC2-IT1O76042 136 aa13.33□□□□□ -0.28
CAPN1-222ENST00000532285 S100A6P06703 90 aa13.33□□□□□ -0.28
CAPN1-222ENST00000532285 LINC00483Q53H64 154 aa13.33□□□□□ -0.28
CAPN1-222ENST00000532285 PPDPFQ9H3Y8 114 aa13.33□□□□□ -0.28
CAPN1-222ENST00000532285 LINC00518Q8N0U6 118 aa13.32□□□□□ -0.28
CAPN1-222ENST00000532285 COPS9Q8WXC6 57 aa13.32□□□□□ -0.28
CAPN1-222ENST00000532285 HINT1P49773 126 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-222ENST00000532285 GAGE2AQ6NT46 116 aa13.31□□□□□ -0.28
CAPN1-222ENST00000532285 PCP2Q8IVA1 136 aa13.3□□□□□ -0.28
CAPN1-222ENST00000532285 SPAG11AQ6PDA7 123 aa13.29□□□□□ -0.28
CAPN1-222ENST00000532285 Q6ZVH6 145 aa13.29□□□□□ -0.28
CAPN1-222ENST00000532285 IFITM1P13164 125 aa13.28□□□□□ -0.28
CAPN1-222ENST00000532285 C4orf48Q5BLP8 95 aa13.25□□□□□ -0.29
CAPN1-222ENST00000532285 HSBP1L1C9JCN9 74 aa13.24□□□□□ -0.29
CAPN1-222ENST00000532285 Q8NBF4 154 aa13.24□□□□□ -0.29
CAPN1-222ENST00000532285 C5orf52A6NGY3 159 aa13.23□□□□□ -0.29
CAPN1-222ENST00000532285 RETNLBQ9BQ08 111 aa13.23□□□□□ -0.29
CAPN1-222ENST00000532285 MUSTN1Q8IVN3 82 aa13.22□□□□□ -0.29
CAPN1-222ENST00000532285 RNF213Q63HN8 5207 aa13.2□□□□□ -0.3
CAPN1-222ENST00000532285 IGLV9-49A0A0B4J1Y8 123 aa13.2□□□□□ -0.3
CAPN1-222ENST00000532285 DHRS4-AS1Q9P1J3 65 aa13.2□□□□□ -0.3
CAPN1-222ENST00000532285 SSBP3-AS1Q7Z2R9 100 aa13.19□□□□□ -0.3
CAPN1-222ENST00000532285 MOBPQ13875 183 aa13.18□□□□□ -0.3
CAPN1-222ENST00000532285 C6orf99Q4VX62 202 aa13.18□□□□□ -0.3
CAPN1-222ENST00000532285 ST20-AS1Q8NBB2 130 aa13.18□□□□□ -0.3
CAPN1-222ENST00000532285 COX7BP24311 80 aa13.17□□□□□ -0.3
CAPN1-222ENST00000532285 ELOF1P60002 83 aaKnown RBP13.17□□□□□ -0.3
CAPN1-222ENST00000532285 A6NDN8 102 aa13.16□□□□□ -0.3
CAPN1-222ENST00000532285 SPINK1P00995 79 aa13.16□□□□□ -0.3
CAPN1-222ENST00000532285 TRBV7-6A0A0J9YX20 115 aa13.15□□□□□ -0.3
CAPN1-222ENST00000532285 SCGB1D1O95968 90 aa13.15□□□□□ -0.3
CAPN1-222ENST00000532285 IGLV7-46A0A075B6I9 117 aa13.12□□□□□ -0.31
CAPN1-222ENST00000532285 TRAV13-2A0A0B4J235 113 aa13.12□□□□□ -0.31
CAPN1-222ENST00000532285 A0A1B0GWB2 263 aa13.1□□□□□ -0.31
CAPN1-222ENST00000532285 SPRR1BP22528 89 aa13.1□□□□□ -0.31
CAPN1-222ENST00000532285 C9orf153Q5TBE3 101 aa13.1□□□□□ -0.31
CAPN1-222ENST00000532285 SLC25A34Q6PIV7 304 aa13.1□□□□□ -0.31
CAPN1-222ENST00000532285 RPS29P62273 56 aaKnown RBP13.08□□□□□ -0.32
CAPN1-222ENST00000532285 TPRXLQ17RH7 258 aa13.08□□□□□ -0.32
CAPN1-222ENST00000532285 FP248Q71RG6 208 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-222ENST00000532285 A4D1N5 150 aa13.04□□□□□ -0.32
CAPN1-222ENST00000532285 TAL2Q16559 108 aa13.04□□□□□ -0.32
CAPN1-222ENST00000532285 SMIM11BQ8TCY0 68 aa13.04□□□□□ -0.32
CAPN1-222ENST00000532285 LAMTOR3Q9UHA4 124 aa13.04□□□□□ -0.32
CAPN1-222ENST00000532285 COX8AP10176 69 aa13.03□□□□□ -0.32
CAPN1-222ENST00000532285 CDIP1Q9H305 208 aa13.02□□□□□ -0.33
CAPN1-222ENST00000532285 TEX49A0A1B0GTD5 131 aa13.01□□□□□ -0.33
CAPN1-222ENST00000532285 DEFB105AQ8NG35 78 aa13.01□□□□□ -0.33
CAPN1-222ENST00000532285 Q8N377 158 aa13□□□□□ -0.33
CAPN1-222ENST00000532285 DLEU1O43261 78 aa12.99□□□□□ -0.33
CAPN1-222ENST00000532285 HIST1H4GQ99525 98 aa12.99□□□□□ -0.33
CAPN1-222ENST00000532285 NHP2Q9NX24 153 aaKnown RBP12.99□□□□□ -0.33
CAPN1-222ENST00000532285 SLC25A20O43772 301 aa12.98□□□□□ -0.33
CAPN1-222ENST00000532285 VAMP3Q15836 100 aa12.98□□□□□ -0.33
CAPN1-222ENST00000532285 IGLV5-48A0A075B6I7 105 aa12.95□□□□□ -0.34
CAPN1-222ENST00000532285 Q1RN00 199 aa12.95□□□□□ -0.34
CAPN1-222ENST00000532285 LINC01547P58512 204 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-222ENST00000532285 C14orf144Q96I85 54 aa12.93□□□□□ -0.34
CAPN1-222ENST00000532285 PAM16Q9Y3D7 125 aa12.93□□□□□ -0.34
CAPN1-222ENST00000532285 SPATA45Q537H7 98 aa12.92□□□□□ -0.34
CAPN1-222ENST00000532285 VAMP8Q9BV40 100 aa12.92□□□□□ -0.34
CAPN1-222ENST00000532285 SMIM29Q86T20 159 aa12.91□□□□□ -0.34
CAPN1-222ENST00000532285 KRTAP13-3Q3SY46 172 aa12.9□□□□□ -0.34
CAPN1-222ENST00000532285 PRO1933Q9H354 126 aa12.9□□□□□ -0.34
CAPN1-222ENST00000532285 HRCT1Q6UXD1 115 aa12.89□□□□□ -0.35
CAPN1-222ENST00000532285 LINC00575Q6W349 94 aa12.89□□□□□ -0.35
CAPN1-222ENST00000532285 C12orf57Q99622 126 aa12.89□□□□□ -0.35
CAPN1-222ENST00000532285 HIGD1BQ9P298 99 aa12.89□□□□□ -0.35
CAPN1-222ENST00000532285 LIMD2Q9BT23 127 aa12.88□□□□□ -0.35
CAPN1-222ENST00000532285 MUC2Q02817 5179 aa12.87□□□□□ -0.35
CAPN1-222ENST00000532285 CD164Q04900 197 aa12.87□□□□□ -0.35
CAPN1-222ENST00000532285 hADV29S1A0JD25 119 aa12.85□□□□□ -0.35
CAPN1-222ENST00000532285 BVES-AS1Q5T3Y7 98 aa12.83□□□□□ -0.36
CAPN1-222ENST00000532285 H7C2G1 150 aa12.82□□□□□ -0.36
CAPN1-222ENST00000532285 CFC1BP0CG36 223 aa12.81□□□□□ -0.36
CAPN1-222ENST00000532285 CFC1P0CG37 223 aa12.81□□□□□ -0.36
CAPN1-222ENST00000532285 Q6ZQY7 126 aa12.81□□□□□ -0.36
CAPN1-222ENST00000532285 C2orf91Q6ZV80 131 aa12.81□□□□□ -0.36
CAPN1-222ENST00000532285 MUC17Q685J3 4493 aa12.8□□□□□ -0.36
CAPN1-222ENST00000532285 RAB37Q96AX2 223 aa12.8□□□□□ -0.36
CAPN1-222ENST00000532285 A0A0U1RQV1 116 aa12.78□□□□□ -0.36
CAPN1-222ENST00000532285 A0A0B4J2C4 111 aa12.77□□□□□ -0.37
CAPN1-222ENST00000532285 F8WEM9 126 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms