RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 LINC00308Q8TCZ7 52 aa11.57□□□□□ -0.56
HIPK3-205ENST00000531504 COPS9Q8WXC6 57 aa11.57□□□□□ -0.56
HIPK3-205ENST00000531504 HIST1H4GQ99525 98 aa11.57□□□□□ -0.56
HIPK3-205ENST00000531504 LOC107984156A0A0G2JMH3 177 aa11.56□□□□□ -0.56
HIPK3-205ENST00000531504 NPC2P61916 151 aa11.56□□□□□ -0.56
HIPK3-205ENST00000531504 TAL2Q16559 108 aa11.56□□□□□ -0.56
HIPK3-205ENST00000531504 ARL17AQ8IVW1 177 aa11.56□□□□□ -0.56
HIPK3-205ENST00000531504 SOSTDC1Q6X4U4 206 aa11.55□□□□□ -0.56
HIPK3-205ENST00000531504 MUSTN1Q8IVN3 82 aa11.55□□□□□ -0.56
HIPK3-205ENST00000531504 PPDPFQ9H3Y8 114 aa11.55□□□□□ -0.56
HIPK3-205ENST00000531504 IGLV7-46A0A075B6I9 117 aa11.54□□□□□ -0.56
HIPK3-205ENST00000531504 LBHQ53QV2 105 aaPredicted RBP11.54□□□□□ -0.56
HIPK3-205ENST00000531504 EIF4EBP3O60516 100 aaPredicted RBP11.53□□□□□ -0.56
HIPK3-205ENST00000531504 LINC01547P58512 204 aaPredicted RBP11.53□□□□□ -0.56
HIPK3-205ENST00000531504 HSD52Q0P140 79 aa11.53□□□□□ -0.56
HIPK3-205ENST00000531504 LINC00304Q8N9R0 145 aa11.52□□□□□ -0.57
HIPK3-205ENST00000531504 DDTP30046 118 aa11.51□□□□□ -0.57
HIPK3-205ENST00000531504 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
HIPK3-205ENST00000531504 BCE1O60756 84 aa11.5□□□□□ -0.57
HIPK3-205ENST00000531504 RPL24P83731 157 aaKnown RBP11.5□□□□□ -0.57
HIPK3-205ENST00000531504 CEND1Q8N111 149 aa11.5□□□□□ -0.57
HIPK3-205ENST00000531504 NDUFC2O95298 119 aa11.49□□□□□ -0.57
HIPK3-205ENST00000531504 CTAG1AP78358 180 aa11.49□□□□□ -0.57
HIPK3-205ENST00000531504 VPREB1P12018 145 aa11.48□□□□□ -0.57
HIPK3-205ENST00000531504 IGLV5-37A0A075B6J1 123 aa11.47□□□□□ -0.57
HIPK3-205ENST00000531504 Q8NDZ9 215 aa11.47□□□□□ -0.57
HIPK3-205ENST00000531504 A4D1N5 150 aa11.46□□□□□ -0.57
HIPK3-205ENST00000531504 KRTAP13-2Q52LG2 175 aa11.46□□□□□ -0.57
HIPK3-205ENST00000531504 FAM229BQ4G0N7 80 aa11.45□□□□□ -0.58
HIPK3-205ENST00000531504 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
HIPK3-205ENST00000531504 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
HIPK3-205ENST00000531504 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
HIPK3-205ENST00000531504 M0R143 59 aa11.44□□□□□ -0.58
HIPK3-205ENST00000531504 TRBV10-2A0A0K0K1G8 114 aa11.43□□□□□ -0.58
HIPK3-205ENST00000531504 TMEM238LA0A1B0GVL6 79 aa11.43□□□□□ -0.58
HIPK3-205ENST00000531504 A6NJY4 79 aa11.43□□□□□ -0.58
HIPK3-205ENST00000531504 FXYD2P54710 66 aa11.43□□□□□ -0.58
HIPK3-205ENST00000531504 M0R378 163 aa11.42□□□□□ -0.58
HIPK3-205ENST00000531504 NCR3O14931 201 aa11.42□□□□□ -0.58
HIPK3-205ENST00000531504 IGKV2-28A0A075B6P5 120 aa11.41□□□□□ -0.58
HIPK3-205ENST00000531504 PCP4L1A6NKN8 68 aa11.41□□□□□ -0.58
HIPK3-205ENST00000531504 IGKV2D-28P01615 120 aa11.41□□□□□ -0.58
HIPK3-205ENST00000531504 HINT1P49773 126 aaPredicted RBP11.41□□□□□ -0.58
HIPK3-205ENST00000531504 BVES-AS1Q5T3Y7 98 aa11.41□□□□□ -0.58
HIPK3-205ENST00000531504 TRAV13-2A0A0B4J235 113 aa11.37□□□□□ -0.59
HIPK3-205ENST00000531504 CFC1BP0CG36 223 aa11.37□□□□□ -0.59
HIPK3-205ENST00000531504 CFC1P0CG37 223 aa11.37□□□□□ -0.59
HIPK3-205ENST00000531504 UBE2AP49459 152 aa11.37□□□□□ -0.59
HIPK3-205ENST00000531504 LINC00337Q8N6G1 96 aa11.37□□□□□ -0.59
HIPK3-205ENST00000531504 LINC00167Q96N53 147 aa11.37□□□□□ -0.59
HIPK3-205ENST00000531504 A0A0B4J2C4 111 aa11.36□□□□□ -0.59
HIPK3-205ENST00000531504 GAGE10A6NGK3 116 aa11.36□□□□□ -0.59
HIPK3-205ENST00000531504 S100A7L2Q5SY68 101 aa11.36□□□□□ -0.59
HIPK3-205ENST00000531504 NHP2Q9NX24 153 aaKnown RBP11.36□□□□□ -0.59
HIPK3-205ENST00000531504 RPL37AP8A6NKH3 93 aa11.35□□□□□ -0.59
HIPK3-205ENST00000531504 ASB16-AS1Q495Z4 193 aa11.35□□□□□ -0.59
HIPK3-205ENST00000531504 OR13C6PQ8NH95 151 aa11.35□□□□□ -0.59
HIPK3-205ENST00000531504 RAB37Q96AX2 223 aa11.35□□□□□ -0.59
HIPK3-205ENST00000531504 A6NDN8 102 aa11.34□□□□□ -0.59
HIPK3-205ENST00000531504 IGLV6-57P01721 117 aa11.34□□□□□ -0.59
HIPK3-205ENST00000531504 FP248Q71RG6 208 aaPredicted RBP11.34□□□□□ -0.59
HIPK3-205ENST00000531504 KRTAP13-1Q8IUC0 172 aa11.34□□□□□ -0.59
HIPK3-205ENST00000531504 TMEM126AQ9H061 195 aa11.34□□□□□ -0.59
HIPK3-205ENST00000531504 TRBV10-3A0A0K0K1G6 114 aa11.33□□□□□ -0.6
HIPK3-205ENST00000531504 A0A1B0GWB2 263 aa11.33□□□□□ -0.6
HIPK3-205ENST00000531504 BATFQ16520 125 aa11.32□□□□□ -0.6
HIPK3-205ENST00000531504 PRO1854Q9UHT4 67 aa11.31□□□□□ -0.6
HIPK3-205ENST00000531504 CBY1Q9Y3M2 126 aa11.31□□□□□ -0.6
HIPK3-205ENST00000531504 K7ERJ3 54 aa11.3□□□□□ -0.6
HIPK3-205ENST00000531504 SEC61BP60468 96 aaKnown RBP11.29□□□□□ -0.6
HIPK3-205ENST00000531504 SPAG11AQ6PDA7 123 aa11.29□□□□□ -0.6
HIPK3-205ENST00000531504 PRYO14603 147 aa11.28□□□□□ -0.6
HIPK3-205ENST00000531504 SNHG12Q9BXW3 62 aa11.28□□□□□ -0.6
HIPK3-205ENST00000531504 KCNQ1DNQ9H478 68 aa11.28□□□□□ -0.6
HIPK3-205ENST00000531504 TRAV23DV6A0A075B6W5 121 aa11.27□□□□□ -0.61
HIPK3-205ENST00000531504 KRTAP13-3Q3SY46 172 aa11.26□□□□□ -0.61
HIPK3-205ENST00000531504 H7C2G1 150 aa11.25□□□□□ -0.61
HIPK3-205ENST00000531504 SMIM11BQ8TCY0 68 aa11.24□□□□□ -0.61
HIPK3-205ENST00000531504 KRTAP4-1Q9BYQ7 146 aa11.24□□□□□ -0.61
HIPK3-205ENST00000531504 Q1RN00 199 aa11.23□□□□□ -0.61
HIPK3-205ENST00000531504 ZNF73O43830 326 aaPredicted RBP11.22□□□□□ -0.61
HIPK3-205ENST00000531504 SPRR1AP35321 89 aa11.22□□□□□ -0.61
HIPK3-205ENST00000531504 PRLHP81277 87 aa11.21□□□□□ -0.61
HIPK3-205ENST00000531504 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
HIPK3-205ENST00000531504 C3orf22Q8N5N4 141 aa11.21□□□□□ -0.61
HIPK3-205ENST00000531504 C6orf99Q4VX62 202 aa11.19□□□□□ -0.62
HIPK3-205ENST00000531504 FAM19A1Q7Z5A9 133 aa11.19□□□□□ -0.62
HIPK3-205ENST00000531504 COL5A1-AS1Q5SY13 56 aa11.18□□□□□ -0.62
HIPK3-205ENST00000531504 TRBV7-6A0A0J9YX20 115 aa11.17□□□□□ -0.62
HIPK3-205ENST00000531504 ETDCA0A1B0GVM5 59 aa11.17□□□□□ -0.62
HIPK3-205ENST00000531504 KRTAP4-16G5E9R7 235 aaPredicted RBP11.17□□□□□ -0.62
HIPK3-205ENST00000531504 PSMB2P49721 201 aa11.16□□□□□ -0.62
HIPK3-205ENST00000531504 TAX1BP3O14907 124 aa11.15□□□□□ -0.62
HIPK3-205ENST00000531504 VAMP3Q15836 100 aa11.15□□□□□ -0.62
HIPK3-205ENST00000531504 B5MCH6 92 aa11.14□□□□□ -0.63
HIPK3-205ENST00000531504 TRIAP1O43715 76 aa11.14□□□□□ -0.63
HIPK3-205ENST00000531504 COX7BP24311 80 aa11.14□□□□□ -0.63
HIPK3-205ENST00000531504 ELOF1P60002 83 aaKnown RBP11.13□□□□□ -0.63
HIPK3-205ENST00000531504 C9orf118A6NHY6 69 aa11.12□□□□□ -0.63
HIPK3-205ENST00000531504 COX6CP09669 75 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms