RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 KRTAP11-1Q8IUC1 163 aa4.31□□□□□ -1.72
TRIM53CP-201ENST00000531490 TTTY13Q9BZ97 58 aa4.31□□□□□ -1.72
TRIM53CP-201ENST00000531490 GAGE2DQ9UEU5 116 aa4.31□□□□□ -1.72
TRIM53CP-201ENST00000531490 TP73-AS1Q9UF72 201 aa4.31□□□□□ -1.72
TRIM53CP-201ENST00000531490 GAGE10A6NGK3 116 aa4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 SMIM1B2RUZ4 78 aa4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 F8WDY8 70 aa4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 TIMM17BO60830 172 aa4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 SPINK8P0C7L1 97 aa4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 HERV-K104P63124 156 aa4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 RPL24P83731 157 aaKnown RBP4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 PHF5AQ7RTV0 110 aaKnown RBP4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 LINC01600Q96MT4 127 aa4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 NDUFA12Q9UI09 145 aa4.3□□□□□ -1.72
TRIM53CP-201ENST00000531490 A0A0J9YXY3 114 aa4.29□□□□□ -1.72
TRIM53CP-201ENST00000531490 TLX1NBP0CAT3 122 aa4.29□□□□□ -1.72
TRIM53CP-201ENST00000531490 IFITM1P13164 125 aa4.29□□□□□ -1.72
TRIM53CP-201ENST00000531490 CKS1BP61024 79 aa4.29□□□□□ -1.72
TRIM53CP-201ENST00000531490 C9orf129Q5T035 196 aaKnown RBP4.29□□□□□ -1.72
TRIM53CP-201ENST00000531490 Q8IZM0 81 aa4.29□□□□□ -1.72
TRIM53CP-201ENST00000531490 C7orf33Q8WU49 177 aa4.29□□□□□ -1.72
TRIM53CP-201ENST00000531490 TRBV30A0A0K0K1B3 111 aa4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 NDUFC2-KCTD14E9PQ53 114 aa4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 TAX1BP3O14907 124 aa4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 KRTAP10-6P60371 365 aaPredicted RBP4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 KRTAP10-8P60410 259 aa4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 PRR3P79522 188 aaKnown RBP4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 GTF2H5Q6ZYL4 71 aa4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 COX7B2Q8TF08 81 aa4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 SPANXDQ9BXN6 97 aa4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 SPANXCQ9NY87 97 aa4.28□□□□□ -1.72
TRIM53CP-201ENST00000531490 FXYD2P54710 66 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 TSPEAR-AS2P59090 65 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 LYRM7Q5U5X0 104 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 FAM19A5Q7Z5A7 132 aaPredicted RBP4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 PPDPFQ9H3Y8 114 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 XAGE1AQ9HD64 81 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 PSORS1C2Q9UIG4 136 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 PKIGQ9Y2B9 76 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 A0A1B0GWB2 263 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 CXCL5P42830 114 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 VAMP3Q15836 100 aa4.27□□□□□ -1.73
TRIM53CP-201ENST00000531490 FABP2P12104 132 aa4.26□□□□□ -1.73
TRIM53CP-201ENST00000531490 UBE2V1Q13404 147 aa4.26□□□□□ -1.73
TRIM53CP-201ENST00000531490 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
TRIM53CP-201ENST00000531490 RAB37Q96AX2 223 aa4.26□□□□□ -1.73
TRIM53CP-201ENST00000531490 A0A0B4J2C4 111 aa4.25□□□□□ -1.73
TRIM53CP-201ENST00000531490 H3BUT2 72 aa4.25□□□□□ -1.73
TRIM53CP-201ENST00000531490 MUSTN1Q8IVN3 82 aa4.25□□□□□ -1.73
TRIM53CP-201ENST00000531490 ZNF625Q96I27 306 aaPredicted RBP4.25□□□□□ -1.73
TRIM53CP-201ENST00000531490 C22orf24Q9Y442 160 aa4.25□□□□□ -1.73
TRIM53CP-201ENST00000531490 A0A1W2PPM0 123 aa4.24□□□□□ -1.73
TRIM53CP-201ENST00000531490 M0QXV9 152 aa4.24□□□□□ -1.73
TRIM53CP-201ENST00000531490 MT3P25713 68 aa4.24□□□□□ -1.73
TRIM53CP-201ENST00000531490 PFN2P35080 140 aa4.24□□□□□ -1.73
TRIM53CP-201ENST00000531490 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
TRIM53CP-201ENST00000531490 COX17Q14061 63 aa4.24□□□□□ -1.73
TRIM53CP-201ENST00000531490 C1orf137Q5JT78 98 aa4.24□□□□□ -1.73
TRIM53CP-201ENST00000531490 SPINK6Q6UWN8 80 aa4.24□□□□□ -1.73
TRIM53CP-201ENST00000531490 PRO1854Q9UHT4 67 aa4.24□□□□□ -1.73
TRIM53CP-201ENST00000531490 A4D1N5 150 aa4.23□□□□□ -1.73
TRIM53CP-201ENST00000531490 CFC1BP0CG36 223 aa4.23□□□□□ -1.73
TRIM53CP-201ENST00000531490 CFC1P0CG37 223 aa4.23□□□□□ -1.73
TRIM53CP-201ENST00000531490 LITAFQ99732 161 aa4.23□□□□□ -1.73
TRIM53CP-201ENST00000531490 TRBV20-1A0A075B6N2 111 aa4.22□□□□□ -1.73
TRIM53CP-201ENST00000531490 IGLV7-43P04211 117 aa4.22□□□□□ -1.73
TRIM53CP-201ENST00000531490 COX6CP09669 75 aa4.22□□□□□ -1.73
TRIM53CP-201ENST00000531490 UBE2BP63146 152 aa4.22□□□□□ -1.73
TRIM53CP-201ENST00000531490 LINC00167Q96N53 147 aa4.22□□□□□ -1.73
TRIM53CP-201ENST00000531490 ERG28Q9UKR5 140 aa4.22□□□□□ -1.73
TRIM53CP-201ENST00000531490 SPCS1Q9Y6A9 102 aa4.22□□□□□ -1.73
TRIM53CP-201ENST00000531490 A0A0U1RRA0 63 aa4.21□□□□□ -1.74
TRIM53CP-201ENST00000531490 RPL37AP8A6NKH3 93 aa4.21□□□□□ -1.74
TRIM53CP-201ENST00000531490 K7EP34 96 aa4.21□□□□□ -1.74
TRIM53CP-201ENST00000531490 LINC00158P58513 81 aa4.21□□□□□ -1.74
TRIM53CP-201ENST00000531490 ADAMTSL4-AS1Q5T5F5 129 aa4.21□□□□□ -1.74
TRIM53CP-201ENST00000531490 Q8NDZ9 215 aa4.21□□□□□ -1.74
TRIM53CP-201ENST00000531490 LINC00308Q8TCZ7 52 aa4.21□□□□□ -1.74
TRIM53CP-201ENST00000531490 IGLV5-37A0A075B6J1 123 aa4.2□□□□□ -1.74
TRIM53CP-201ENST00000531490 TRAV13-2A0A0B4J235 113 aa4.2□□□□□ -1.74
TRIM53CP-201ENST00000531490 K7ERJ3 54 aa4.2□□□□□ -1.74
TRIM53CP-201ENST00000531490 SCGB1C2P0DMR2 95 aa4.2□□□□□ -1.74
TRIM53CP-201ENST00000531490 PSMB2P49721 201 aa4.2□□□□□ -1.74
TRIM53CP-201ENST00000531490 Q1RN00 199 aa4.2□□□□□ -1.74
TRIM53CP-201ENST00000531490 REG3GQ6UW15 175 aa4.2□□□□□ -1.74
TRIM53CP-201ENST00000531490 MRPL55Q7Z7F7 128 aaKnown RBP4.2□□□□□ -1.74
TRIM53CP-201ENST00000531490 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
TRIM53CP-201ENST00000531490 LOC107984156A0A0G2JMH3 177 aa4.19□□□□□ -1.74
TRIM53CP-201ENST00000531490 F8W1H4 67 aa4.19□□□□□ -1.74
TRIM53CP-201ENST00000531490 TSPAN13O95857 204 aa4.19□□□□□ -1.74
TRIM53CP-201ENST00000531490 ARL17AQ8IVW1 177 aa4.19□□□□□ -1.74
TRIM53CP-201ENST00000531490 MIR7-3HGQ8N6C7 128 aa4.19□□□□□ -1.74
TRIM53CP-201ENST00000531490 VPREB1P12018 145 aa4.18□□□□□ -1.74
TRIM53CP-201ENST00000531490 NPC2P61916 151 aa4.18□□□□□ -1.74
TRIM53CP-201ENST00000531490 IGKV2-28A0A075B6P5 120 aa4.17□□□□□ -1.74
TRIM53CP-201ENST00000531490 H0Y9J4 135 aa4.17□□□□□ -1.74
TRIM53CP-201ENST00000531490 NDUFC2O95298 119 aa4.17□□□□□ -1.74
TRIM53CP-201ENST00000531490 IGKV2D-28P01615 120 aa4.17□□□□□ -1.74
TRIM53CP-201ENST00000531490 DAND5Q8N907 189 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms