RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 FAM30AQ9NZY2 134 aa3.66□□□□□ -1.82
PCF11-205ENST00000530906 TRBV10-3A0A0K0K1G6 114 aa3.65□□□□□ -1.83
PCF11-205ENST00000530906 COX7BP24311 80 aa3.65□□□□□ -1.83
PCF11-205ENST00000530906 ELOF1P60002 83 aaKnown RBP3.65□□□□□ -1.83
PCF11-205ENST00000530906 PRR3P79522 188 aaKnown RBP3.65□□□□□ -1.83
PCF11-205ENST00000530906 C14orf177Q52M58 125 aa3.65□□□□□ -1.83
PCF11-205ENST00000530906 ATP5EP2Q5VTU8 51 aa3.65□□□□□ -1.83
PCF11-205ENST00000530906 Q8N9P0 234 aaPredicted RBP3.65□□□□□ -1.83
PCF11-205ENST00000530906 LOC110117498A0A087WWA1 95 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 USP17L23D6RBM5 183 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 CCKP06307 115 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 TTC32Q5I0X7 151 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 GAGE2AQ6NT46 116 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 NKAPP1Q8N9T2 125 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 Q8NDZ9 215 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 LINC00526Q96FQ7 95 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 KCNQ1DNQ9H478 68 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 XAGE1AQ9HD64 81 aa3.64□□□□□ -1.83
PCF11-205ENST00000530906 LOC107984640A0A0U1RRK4 108 aa3.63□□□□□ -1.83
PCF11-205ENST00000530906 NUPR2A6NF83 97 aa3.63□□□□□ -1.83
PCF11-205ENST00000530906 PRYO14603 147 aa3.63□□□□□ -1.83
PCF11-205ENST00000530906 RBM3P98179 157 aaKnown RBP3.63□□□□□ -1.83
PCF11-205ENST00000530906 Q6JHZ5 121 aa3.63□□□□□ -1.83
PCF11-205ENST00000530906 Q6ZRP5 223 aa3.63□□□□□ -1.83
PCF11-205ENST00000530906 C14orf132Q9NPU4 83 aa3.63□□□□□ -1.83
PCF11-205ENST00000530906 COL6A5A8TX70 2615 aa3.63□□□□□ -1.83
PCF11-205ENST00000530906 FBN1P35555 2871 aaKnown RBP3.63□□□□□ -1.83
PCF11-205ENST00000530906 TRRAPQ9Y4A5 3859 aa3.62□□□□□ -1.83
PCF11-205ENST00000530906 A0A1B0GW54 56 aa3.62□□□□□ -1.83
PCF11-205ENST00000530906 NDUFV3P56181 108 aaKnown RBP3.62□□□□□ -1.83
PCF11-205ENST00000530906 CNBPP62633 177 aaKnown RBP3.62□□□□□ -1.83
PCF11-205ENST00000530906 Q6ZQY7 126 aa3.62□□□□□ -1.83
PCF11-205ENST00000530906 ANAPC13Q9BS18 74 aa3.62□□□□□ -1.83
PCF11-205ENST00000530906 KRTAP1-5Q9BYS1 174 aa3.62□□□□□ -1.83
PCF11-205ENST00000530906 DHRS4-AS1Q9P1J3 65 aa3.62□□□□□ -1.83
PCF11-205ENST00000530906 TENM3Q9P273 2699 aa3.61□□□□□ -1.83
PCF11-205ENST00000530906 PRB2P02812 416 aaPredicted RBP3.61□□□□□ -1.83
PCF11-205ENST00000530906 C9orf129Q5T035 196 aaKnown RBP3.61□□□□□ -1.83
PCF11-205ENST00000530906 UBE2DNLQ8IWF7 75 aa3.61□□□□□ -1.83
PCF11-205ENST00000530906 DSCR8Q96T75 97 aa3.61□□□□□ -1.83
PCF11-205ENST00000530906 UBL5Q9BZL1 73 aa3.61□□□□□ -1.83
PCF11-205ENST00000530906 LAMTOR3Q9UHA4 124 aa3.61□□□□□ -1.83
PCF11-205ENST00000530906 APLNQ9ULZ1 77 aa3.61□□□□□ -1.83
PCF11-205ENST00000530906 SPRR1AP35321 89 aa3.6□□□□□ -1.83
PCF11-205ENST00000530906 Q6ZQT0 140 aa3.6□□□□□ -1.83
PCF11-205ENST00000530906 SMCR5Q8TEV8 140 aa3.6□□□□□ -1.83
PCF11-205ENST00000530906 C7orf33Q8WU49 177 aa3.6□□□□□ -1.83
PCF11-205ENST00000530906 NOTCH1P46531 2555 aa3.6□□□□□ -1.83
PCF11-205ENST00000530906 PKD1L1Q8TDX9 2849 aa3.6□□□□□ -1.83
PCF11-205ENST00000530906 DNAH3Q8TD57 4116 aa3.59□□□□□ -1.83
PCF11-205ENST00000530906 IGLV1-50A0A075B6I6 118 aa3.59□□□□□ -1.83
PCF11-205ENST00000530906 TRBV7-4A0A0J9YYF1 115 aa3.59□□□□□ -1.83
PCF11-205ENST00000530906 PSCAO43653 123 aa3.59□□□□□ -1.83
PCF11-205ENST00000530906 Q6ZRX8 168 aa3.59□□□□□ -1.83
PCF11-205ENST00000530906 LINC00846Q9NV44 126 aa3.59□□□□□ -1.83
PCF11-205ENST00000530906 NBEAL1Q6ZS30 2694 aa3.59□□□□□ -1.83
PCF11-205ENST00000530906 ETDCA0A1B0GVM5 59 aa3.58□□□□□ -1.84
PCF11-205ENST00000530906 C16orf90A8MZG2 172 aa3.58□□□□□ -1.84
PCF11-205ENST00000530906 ATOX1O00244 68 aa3.58□□□□□ -1.84
PCF11-205ENST00000530906 BCE1O60756 84 aa3.58□□□□□ -1.84
PCF11-205ENST00000530906 MRPL55Q7Z7F7 128 aaKnown RBP3.58□□□□□ -1.84
PCF11-205ENST00000530906 LINC00474Q9P2X8 69 aa3.58□□□□□ -1.84
PCF11-205ENST00000530906 MGAM2Q2M2H8 2515 aa3.58□□□□□ -1.84
PCF11-205ENST00000530906 FAM236AA0A1B0GUQ0 79 aa3.57□□□□□ -1.84
PCF11-205ENST00000530906 FAM236BA0A1B0GV22 79 aa3.57□□□□□ -1.84
PCF11-205ENST00000530906 KRTAP4-16G5E9R7 235 aaPredicted RBP3.57□□□□□ -1.84
PCF11-205ENST00000530906 HIST1H4AP62805 103 aaKnown RBP3.57□□□□□ -1.84
PCF11-205ENST00000530906 CXCL6P80162 114 aa3.57□□□□□ -1.84
PCF11-205ENST00000530906 SERTAD4-AS1Q5TG53 156 aa3.57□□□□□ -1.84
PCF11-205ENST00000530906 IGLV5-48A0A075B6I7 105 aa3.56□□□□□ -1.84
PCF11-205ENST00000530906 NBDYA0A0U1RRE5 68 aa3.56□□□□□ -1.84
PCF11-205ENST00000530906 RPL37AP8A6NKH3 93 aa3.56□□□□□ -1.84
PCF11-205ENST00000530906 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
PCF11-205ENST00000530906 H0Y9J4 135 aa3.55□□□□□ -1.84
PCF11-205ENST00000530906 CASC10Q5T4H9 136 aa3.55□□□□□ -1.84
PCF11-205ENST00000530906 REG3GQ6UW15 175 aa3.55□□□□□ -1.84
PCF11-205ENST00000530906 SMIM20Q8N5G0 67 aa3.55□□□□□ -1.84
PCF11-205ENST00000530906 C9orf163Q8N9P6 203 aa3.55□□□□□ -1.84
PCF11-205ENST00000530906 ANK2Q01484 3957 aa3.54□□□□□ -1.84
PCF11-205ENST00000530906 UQCRQO14949 82 aa3.54□□□□□ -1.84
PCF11-205ENST00000530906 FUSP35637 526 aaKnown RBP eCLIP3.54□□□□□ -1.84
PCF11-205ENST00000530906 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
PCF11-205ENST00000530906 STAB2Q8WWQ8 2551 aa3.53□□□□□ -1.84
PCF11-205ENST00000530906 A0A096LNI7 61 aa3.53□□□□□ -1.84
PCF11-205ENST00000530906 KRTAP21-3Q3LHN1 58 aa3.53□□□□□ -1.84
PCF11-205ENST00000530906 Q6ZVQ6 151 aa3.53□□□□□ -1.84
PCF11-205ENST00000530906 FAM19A5Q7Z5A7 132 aaPredicted RBP3.53□□□□□ -1.84
PCF11-205ENST00000530906 Q8N377 158 aa3.53□□□□□ -1.84
PCF11-205ENST00000530906 CMYA5Q8N3K9 4069 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 IGKV3D-7A0A0C4DH55 119 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 FAM168BA1KXE4 195 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 LRCOL1A6NCL2 159 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 F8WEM9 126 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 COX7CP15954 63 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 LINC01547P58512 204 aaPredicted RBP3.52□□□□□ -1.85
PCF11-205ENST00000530906 UBE2BP63146 152 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 Q6ZRN7 208 aaPredicted RBP3.52□□□□□ -1.85
PCF11-205ENST00000530906 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 C3orf22Q8N5N4 141 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms