RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SEC11AP67812 179 aa3.72□□□□□ -1.81
CSDE1-213ENST00000530784 ORMDL2Q53FV1 153 aa3.72□□□□□ -1.81
CSDE1-213ENST00000530784 FAM19A3Q7Z5A8 133 aa3.72□□□□□ -1.81
CSDE1-213ENST00000530784 Q8N8P6 123 aa3.72□□□□□ -1.81
CSDE1-213ENST00000530784 TP73-AS1Q9UF72 201 aa3.72□□□□□ -1.81
CSDE1-213ENST00000530784 IGIPA6NJ69 53 aa3.71□□□□□ -1.82
CSDE1-213ENST00000530784 K7EMI3 77 aa3.71□□□□□ -1.82
CSDE1-213ENST00000530784 GEMIN7Q9H840 131 aaKnown RBP3.71□□□□□ -1.82
CSDE1-213ENST00000530784 CDKN2A-AS1Q9UH64 79 aa3.71□□□□□ -1.82
CSDE1-213ENST00000530784 S100PP25815 95 aa3.7□□□□□ -1.82
CSDE1-213ENST00000530784 G0S2P27469 103 aa3.7□□□□□ -1.82
CSDE1-213ENST00000530784 TIMM17AQ99595 171 aa3.7□□□□□ -1.82
CSDE1-213ENST00000530784 NXT2Q9NPJ8 142 aaKnown RBP3.7□□□□□ -1.82
CSDE1-213ENST00000530784 COX19Q49B96 90 aa3.69□□□□□ -1.82
CSDE1-213ENST00000530784 RETNLBQ9BQ08 111 aa3.69□□□□□ -1.82
CSDE1-213ENST00000530784 MOBPQ13875 183 aa3.68□□□□□ -1.82
CSDE1-213ENST00000530784 FAM229BQ4G0N7 80 aa3.68□□□□□ -1.82
CSDE1-213ENST00000530784 LINC00483Q53H64 154 aa3.68□□□□□ -1.82
CSDE1-213ENST00000530784 PDZD11Q5EBL8 140 aa3.68□□□□□ -1.82
CSDE1-213ENST00000530784 LINC00304Q8N9R0 145 aa3.68□□□□□ -1.82
CSDE1-213ENST00000530784 COX7B2Q8TF08 81 aa3.68□□□□□ -1.82
CSDE1-213ENST00000530784 TOMM6Q96B49 74 aa3.68□□□□□ -1.82
CSDE1-213ENST00000530784 IGKV2D-26A0A0A0MRZ7 120 aa3.67□□□□□ -1.82
CSDE1-213ENST00000530784 TINCRA0A1B0GVN0 87 aa3.67□□□□□ -1.82
CSDE1-213ENST00000530784 RAB5BP61020 215 aa3.67□□□□□ -1.82
CSDE1-213ENST00000530784 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
CSDE1-213ENST00000530784 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
CSDE1-213ENST00000530784 C5orf47Q569G3 176 aa3.67□□□□□ -1.82
CSDE1-213ENST00000530784 KRTAP13-1Q8IUC0 172 aa3.67□□□□□ -1.82
CSDE1-213ENST00000530784 SCGB3A1Q96QR1 104 aa3.67□□□□□ -1.82
CSDE1-213ENST00000530784 GNB1LQ9BYB4 327 aa3.67□□□□□ -1.82
CSDE1-213ENST00000530784 SPINK8P0C7L1 97 aa3.66□□□□□ -1.82
CSDE1-213ENST00000530784 PRLHP81277 87 aa3.66□□□□□ -1.82
CSDE1-213ENST00000530784 LINC01549A6NIU2 74 aa3.65□□□□□ -1.83
CSDE1-213ENST00000530784 H3BRM9 83 aa3.65□□□□□ -1.83
CSDE1-213ENST00000530784 TRGC2P03986 189 aa3.65□□□□□ -1.83
CSDE1-213ENST00000530784 FAM19A1Q7Z5A9 133 aa3.65□□□□□ -1.83
CSDE1-213ENST00000530784 CST9LQ9H4G1 147 aa3.65□□□□□ -1.83
CSDE1-213ENST00000530784 HIST1H2BKO60814 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST1H2BJP06899 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST1H2BOP23527 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST1H2BBP33778 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 PFN2P35080 140 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST1H2BDP58876 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST1H2BCP62807 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 CTAG1AP78358 180 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 PMVKQ15126 192 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST2H2BEQ16778 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST1H2BHQ93079 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST1H2BNQ99877 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 HIST1H2BMQ99879 126 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 TMEM126AQ9H061 195 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 TRAPPC1Q9Y5R8 145 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 FAT4Q6V0I7 4981 aa3.64□□□□□ -1.83
CSDE1-213ENST00000530784 LOC105371267A0A1B0GV96 52 aa3.63□□□□□ -1.83
CSDE1-213ENST00000530784 TMEM238C9JI98 176 aa3.63□□□□□ -1.83
CSDE1-213ENST00000530784 SEC61GP60059 68 aa3.63□□□□□ -1.83
CSDE1-213ENST00000530784 FABP9Q0Z7S8 132 aa3.63□□□□□ -1.83
CSDE1-213ENST00000530784 SND1-IT1Q9HBX3 110 aa3.63□□□□□ -1.83
CSDE1-213ENST00000530784 ERG28Q9UKR5 140 aa3.63□□□□□ -1.83
CSDE1-213ENST00000530784 LINC01546A6NGU7 62 aa3.62□□□□□ -1.83
CSDE1-213ENST00000530784 M0R378 163 aa3.62□□□□□ -1.83
CSDE1-213ENST00000530784 IGLC3P0DOY3 106 aa3.62□□□□□ -1.83
CSDE1-213ENST00000530784 FA2HQ7L5A8 372 aa3.62□□□□□ -1.83
CSDE1-213ENST00000530784 C3orf22Q8N5N4 141 aa3.62□□□□□ -1.83
CSDE1-213ENST00000530784 PLEKHB2Q96CS7 222 aa3.62□□□□□ -1.83
CSDE1-213ENST00000530784 HIGD2AQ9BW72 106 aa3.62□□□□□ -1.83
CSDE1-213ENST00000530784 S100A6P06703 90 aa3.61□□□□□ -1.83
CSDE1-213ENST00000530784 ZNF22P17026 224 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-213ENST00000530784 NDUFA6P56556 154 aa3.61□□□□□ -1.83
CSDE1-213ENST00000530784 COX17Q14061 63 aa3.61□□□□□ -1.83
CSDE1-213ENST00000530784 SPAG11AQ6PDA7 123 aa3.61□□□□□ -1.83
CSDE1-213ENST00000530784 SFTA2Q6UW10 78 aa3.61□□□□□ -1.83
CSDE1-213ENST00000530784 FP248Q71RG6 208 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-213ENST00000530784 ZNF706Q9Y5V0 76 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-213ENST00000530784 IGFL1Q6UW32 110 aa3.6□□□□□ -1.83
CSDE1-213ENST00000530784 LINC00337Q8N6G1 96 aa3.6□□□□□ -1.83
CSDE1-213ENST00000530784 Q8NDZ9 215 aa3.6□□□□□ -1.83
CSDE1-213ENST00000530784 C18orf32Q8TCD1 76 aa3.6□□□□□ -1.83
CSDE1-213ENST00000530784 ZNF625Q96I27 306 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-213ENST00000530784 SPRR4Q96PI1 79 aa3.6□□□□□ -1.83
CSDE1-213ENST00000530784 HIST3H2BBQ8N257 126 aa3.59□□□□□ -1.83
CSDE1-213ENST00000530784 LINC00158P58513 81 aa3.58□□□□□ -1.84
CSDE1-213ENST00000530784 TMEM170BQ5T4T1 132 aa3.58□□□□□ -1.84
CSDE1-213ENST00000530784 DAND5Q8N907 189 aa3.58□□□□□ -1.84
CSDE1-213ENST00000530784 A0A1B0GVX0 72 aa3.57□□□□□ -1.84
CSDE1-213ENST00000530784 C11orf86A6NJI1 115 aa3.57□□□□□ -1.84
CSDE1-213ENST00000530784 HBDP02042 147 aa3.57□□□□□ -1.84
CSDE1-213ENST00000530784 ASB16-AS1Q495Z4 193 aa3.57□□□□□ -1.84
CSDE1-213ENST00000530784 CHCHD1Q96BP2 118 aaKnown RBP3.57□□□□□ -1.84
CSDE1-213ENST00000530784 HIST1H2BLQ99880 126 aa3.57□□□□□ -1.84
CSDE1-213ENST00000530784 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
CSDE1-213ENST00000530784 ETDCA0A1B0GVM5 59 aa3.56□□□□□ -1.84
CSDE1-213ENST00000530784 SPINK1P00995 79 aa3.56□□□□□ -1.84
CSDE1-213ENST00000530784 LINC00614P0C842 121 aa3.56□□□□□ -1.84
CSDE1-213ENST00000530784 PMCHL1Q16048 86 aa3.56□□□□□ -1.84
CSDE1-213ENST00000530784 BAGE3Q86Y29 109 aa3.56□□□□□ -1.84
CSDE1-213ENST00000530784 BOD1L2Q8IYS8 172 aa3.56□□□□□ -1.84
CSDE1-213ENST00000530784 NDUFA12Q9UI09 145 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms