RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 CSNK1G2-AS1Q8NCQ2 148 aa9.31□□□□□ -0.92
PCF11-204ENST00000530660 A0A0J9YWU9 116 aa9.31□□□□□ -0.92
PCF11-204ENST00000530660 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
PCF11-204ENST00000530660 DSCR9P59020 149 aa9.3□□□□□ -0.92
PCF11-204ENST00000530660 A6NN06 94 aa9.3□□□□□ -0.92
PCF11-204ENST00000530660 DSCR10P59022 87 aa9.3□□□□□ -0.92
PCF11-204ENST00000530660 KPRPQ5T749 579 aaPredicted RBP9.3□□□□□ -0.92
PCF11-204ENST00000530660 C6orf48Q9UBA6 75 aa9.29□□□□□ -0.92
PCF11-204ENST00000530660 DOPEY1Q5JWR5 2465 aa9.29□□□□□ -0.92
PCF11-204ENST00000530660 A6NED7 52 aa9.29□□□□□ -0.92
PCF11-204ENST00000530660 ATP11AUNQ6ZP68 121 aa9.28□□□□□ -0.92
PCF11-204ENST00000530660 A0A1W2PNM2 257 aa9.28□□□□□ -0.92
PCF11-204ENST00000530660 OTOGQ6ZRI0 2925 aa9.27□□□□□ -0.93
PCF11-204ENST00000530660 NDUFS5O43920 106 aa9.26□□□□□ -0.93
PCF11-204ENST00000530660 Q8N377 158 aa9.26□□□□□ -0.93
PCF11-204ENST00000530660 PHF5AQ7RTV0 110 aaKnown RBP9.26□□□□□ -0.93
PCF11-204ENST00000530660 LIMD2Q9BT23 127 aa9.26□□□□□ -0.93
PCF11-204ENST00000530660 C19orf73Q9NVV2 129 aa9.26□□□□□ -0.93
PCF11-204ENST00000530660 F8P00451 2351 aa9.26□□□□□ -0.93
PCF11-204ENST00000530660 VPREB1P12018 145 aa9.25□□□□□ -0.93
PCF11-204ENST00000530660 LINC00208Q96KT6 92 aa9.25□□□□□ -0.93
PCF11-204ENST00000530660 NDUFB1O75438 58 aa9.24□□□□□ -0.93
PCF11-204ENST00000530660 ZNF469Q96JG9 3925 aaPredicted RBP9.24□□□□□ -0.93
PCF11-204ENST00000530660 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
PCF11-204ENST00000530660 MYO18BQ8IUG5 2567 aa9.23□□□□□ -0.93
PCF11-204ENST00000530660 IGLV5-48A0A075B6I7 105 aa9.22□□□□□ -0.93
PCF11-204ENST00000530660 ABCA12Q86UK0 2595 aa9.21□□□□□ -0.93
PCF11-204ENST00000530660 ACACBO00763 2458 aa9.21□□□□□ -0.94
PCF11-204ENST00000530660 PRO0255Q9UI72 69 aa9.21□□□□□ -0.94
PCF11-204ENST00000530660 PKD1L2Q7Z442 2459 aa9.2□□□□□ -0.94
PCF11-204ENST00000530660 DNAJC9-AS1A6NH13 148 aa9.2□□□□□ -0.94
PCF11-204ENST00000530660 FAM208BQ5VWN6 2430 aa9.2□□□□□ -0.94
PCF11-204ENST00000530660 C8orf87E5RJ46 101 aa9.2□□□□□ -0.94
PCF11-204ENST00000530660 C1orf137Q5JT78 98 aa9.2□□□□□ -0.94
PCF11-204ENST00000530660 MP68P56378 58 aa9.19□□□□□ -0.94
PCF11-204ENST00000530660 C7orf65Q6ZTY9 151 aa9.19□□□□□ -0.94
PCF11-204ENST00000530660 Q75L30 129 aa9.19□□□□□ -0.94
PCF11-204ENST00000530660 CMC4P56277 68 aaPredicted RBP9.18□□□□□ -0.94
PCF11-204ENST00000530660 WFDC10BQ8IUB3 73 aa9.18□□□□□ -0.94
PCF11-204ENST00000530660 GVQW2A0A096LPI5 108 aaPredicted RBP9.17□□□□□ -0.94
PCF11-204ENST00000530660 IGLV1-51P01701 117 aa9.17□□□□□ -0.94
PCF11-204ENST00000530660 A0A0G2JQZ4 141 aa9.16□□□□□ -0.94
PCF11-204ENST00000530660 A0A1W2PNN7 141 aa9.16□□□□□ -0.94
PCF11-204ENST00000530660 MOBPQ13875 183 aa9.16□□□□□ -0.94
PCF11-204ENST00000530660 DEFB4AO15263 64 aa9.16□□□□□ -0.94
PCF11-204ENST00000530660 Q8NBF4 154 aa9.16□□□□□ -0.94
PCF11-204ENST00000530660 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
PCF11-204ENST00000530660 CACNA1AO00555 2505 aa9.16□□□□□ -0.94
PCF11-204ENST00000530660 CDC42SE1Q9NRR8 79 aa9.15□□□□□ -0.94
PCF11-204ENST00000530660 CAMK2N2Q96S95 79 aa9.14□□□□□ -0.95
PCF11-204ENST00000530660 KRTAP10-9P60411 292 aa9.14□□□□□ -0.95
PCF11-204ENST00000530660 LOC101927531A0A1B0GV80 90 aa9.13□□□□□ -0.95
PCF11-204ENST00000530660 C7orf33Q8WU49 177 aa9.13□□□□□ -0.95
PCF11-204ENST00000530660 Q9BRP9 147 aa9.12□□□□□ -0.95
PCF11-204ENST00000530660 X6R8D5 127 aa9.12□□□□□ -0.95
PCF11-204ENST00000530660 CCDC168Q8NDH2 2452 aa9.12□□□□□ -0.95
PCF11-204ENST00000530660 UNC79Q9P2D8 2635 aa9.11□□□□□ -0.95
PCF11-204ENST00000530660 COA5Q86WW8 74 aa9.11□□□□□ -0.95
PCF11-204ENST00000530660 H0Y9P7 68 aa9.11□□□□□ -0.95
PCF11-204ENST00000530660 H3BS24 57 aa9.11□□□□□ -0.95
PCF11-204ENST00000530660 MTORP42345 2549 aa9.11□□□□□ -0.95
PCF11-204ENST00000530660 IGSF10Q6WRI0 2623 aa9.11□□□□□ -0.95
PCF11-204ENST00000530660 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
PCF11-204ENST00000530660 SPRR4Q96PI1 79 aa9.1□□□□□ -0.95
PCF11-204ENST00000530660 TNP2Q05952 138 aa9.1□□□□□ -0.95
PCF11-204ENST00000530660 RPL37AP61513 92 aaKnown RBP9.09□□□□□ -0.95
PCF11-204ENST00000530660 A0A1B0GW54 56 aa9.09□□□□□ -0.95
PCF11-204ENST00000530660 SPAG11AQ6PDA7 123 aa9.09□□□□□ -0.95
PCF11-204ENST00000530660 PRAC1Q96KF2 57 aa9.09□□□□□ -0.95
PCF11-204ENST00000530660 HIVEP2P31629 2446 aa9.08□□□□□ -0.96
PCF11-204ENST00000530660 PIEZO1Q92508 2521 aa9.08□□□□□ -0.96
PCF11-204ENST00000530660 IGKV2D-24A0A075B6R9 120 aa9.08□□□□□ -0.96
PCF11-204ENST00000530660 PRR34Q9NV39 138 aa9.07□□□□□ -0.96
PCF11-204ENST00000530660 RPL37AP8A6NKH3 93 aa9.07□□□□□ -0.96
PCF11-204ENST00000530660 SPINK7P58062 85 aa9.07□□□□□ -0.96
PCF11-204ENST00000530660 ITPR3Q14573 2671 aa9.06□□□□□ -0.96
PCF11-204ENST00000530660 EGFEM1PQ0D2K5 195 aa9.06□□□□□ -0.96
PCF11-204ENST00000530660 HTN3P15516 51 aa9.05□□□□□ -0.96
PCF11-204ENST00000530660 SERTAD4-AS1Q5TG53 156 aa9.05□□□□□ -0.96
PCF11-204ENST00000530660 NKAPP1Q8N9T2 125 aa9.04□□□□□ -0.96
PCF11-204ENST00000530660 LINC00313P59037 77 aa9.03□□□□□ -0.96
PCF11-204ENST00000530660 DEFB135Q30KP9 77 aa9.03□□□□□ -0.96
PCF11-204ENST00000530660 DEFB113Q30KQ7 82 aa9.03□□□□□ -0.96
PCF11-204ENST00000530660 C9orf163Q8N9P6 203 aa9.03□□□□□ -0.96
PCF11-204ENST00000530660 UBR5O95071 2799 aaPredicted RBP9.03□□□□□ -0.96
PCF11-204ENST00000530660 Q6ZRX8 168 aa9.02□□□□□ -0.97
PCF11-204ENST00000530660 ADM2Q7Z4H4 148 aa9.02□□□□□ -0.97
PCF11-204ENST00000530660 FLNAP21333 2647 aaKnown RBP9.01□□□□□ -0.97
PCF11-204ENST00000530660 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
PCF11-204ENST00000530660 LELP1Q5T871 98 aa9□□□□□ -0.97
PCF11-204ENST00000530660 DHRS4-AS1Q9P1J3 65 aa9□□□□□ -0.97
PCF11-204ENST00000530660 PCOTHQ58A44 107 aa8.99□□□□□ -0.97
PCF11-204ENST00000530660 LINC00476Q8WZB0 136 aa8.99□□□□□ -0.97
PCF11-204ENST00000530660 A0A087WSZ3 146 aa8.99□□□□□ -0.97
PCF11-204ENST00000530660 CASC2Q6XLA1 102 aa8.99□□□□□ -0.97
PCF11-204ENST00000530660 ZNF462Q96JM2 2506 aa8.98□□□□□ -0.97
PCF11-204ENST00000530660 KRTAP1-3Q8IUG1 177 aa8.98□□□□□ -0.97
PCF11-204ENST00000530660 C15orf56Q8N910 161 aa8.98□□□□□ -0.97
PCF11-204ENST00000530660 PKD1L1Q8TDX9 2849 aa8.98□□□□□ -0.97
PCF11-204ENST00000530660 ACANP16112 2415 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms