RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 SEC11AP67812 179 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 IFITM2Q01629 132 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 MRPL51Q4U2R6 128 aaKnown RBP2.7□□□□□ -1.98
VPS26B-205ENST00000530402 C9orf116Q5BN46 136 aaPredicted RBP2.7□□□□□ -1.98
VPS26B-205ENST00000530402 C1orf137Q5JT78 98 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 ATP5L2Q7Z4Y8 100 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 LINC00526Q96FQ7 95 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 HIGD2AQ9BW72 106 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 MRPL35Q9NZE8 188 aaKnown RBP2.7□□□□□ -1.98
VPS26B-205ENST00000530402 LAMTOR2Q9Y2Q5 125 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 V9GYV3 84 aa2.7□□□□□ -1.98
VPS26B-205ENST00000530402 D6R8Y8 96 aa2.69□□□□□ -1.98
VPS26B-205ENST00000530402 K7EMI3 77 aa2.69□□□□□ -1.98
VPS26B-205ENST00000530402 UBE2D1P51668 147 aa2.69□□□□□ -1.98
VPS26B-205ENST00000530402 MRPS36P82909 103 aaKnown RBP2.69□□□□□ -1.98
VPS26B-205ENST00000530402 MRPL54Q6P161 138 aaKnown RBP2.69□□□□□ -1.98
VPS26B-205ENST00000530402 DIRC1Q969H9 104 aa2.69□□□□□ -1.98
VPS26B-205ENST00000530402 SMIM2Q9BVW6 85 aa2.69□□□□□ -1.98
VPS26B-205ENST00000530402 MAP1LC3AQ9H492 121 aa2.69□□□□□ -1.98
VPS26B-205ENST00000530402 CYSLTR1Q9Y271 337 aa2.69□□□□□ -1.98
VPS26B-205ENST00000530402 DMBT1Q9UGM3 2413 aaPredicted RBP2.68□□□□□ -1.98
VPS26B-205ENST00000530402 LOC105371267A0A1B0GV96 52 aa2.68□□□□□ -1.98
VPS26B-205ENST00000530402 LINC01549A6NIU2 74 aa2.68□□□□□ -1.98
VPS26B-205ENST00000530402 Q6ZUT4 128 aa2.68□□□□□ -1.98
VPS26B-205ENST00000530402 TMEM141Q96I45 108 aa2.68□□□□□ -1.98
VPS26B-205ENST00000530402 PRELID3AQ96N28 172 aa2.68□□□□□ -1.98
VPS26B-205ENST00000530402 PSORS1C2Q9UIG4 136 aa2.68□□□□□ -1.98
VPS26B-205ENST00000530402 HERC1Q15751 4861 aa2.68□□□□□ -1.98
VPS26B-205ENST00000530402 FLG2Q5D862 2391 aaPredicted RBP2.67□□□□□ -1.98
VPS26B-205ENST00000530402 TRBV30A0A0K0K1B3 111 aa2.67□□□□□ -1.98
VPS26B-205ENST00000530402 S100PP25815 95 aa2.67□□□□□ -1.98
VPS26B-205ENST00000530402 RPL39P62891 51 aaKnown RBP2.67□□□□□ -1.98
VPS26B-205ENST00000530402 HERVK_113P63121 156 aa2.67□□□□□ -1.98
VPS26B-205ENST00000530402 NXT2Q9NPJ8 142 aaKnown RBP2.67□□□□□ -1.98
VPS26B-205ENST00000530402 TOMM7Q9P0U1 55 aa2.67□□□□□ -1.98
VPS26B-205ENST00000530402 NPYP01303 97 aa2.66□□□□□ -1.98
VPS26B-205ENST00000530402 MT1HL1P0DM35 61 aa2.66□□□□□ -1.98
VPS26B-205ENST00000530402 UNQ6190/PRO20217Q6UXQ8 127 aa2.66□□□□□ -1.98
VPS26B-205ENST00000530402 PHF5AQ7RTV0 110 aaKnown RBP2.66□□□□□ -1.98
VPS26B-205ENST00000530402 FAM19A5Q7Z5A7 132 aaPredicted RBP2.66□□□□□ -1.98
VPS26B-205ENST00000530402 Q8N8P6 123 aa2.66□□□□□ -1.98
VPS26B-205ENST00000530402 ZCCHC13Q8WW36 166 aaKnown RBP2.66□□□□□ -1.98
VPS26B-205ENST00000530402 SRRM2Q9UQ35 2752 aaKnown RBP2.66□□□□□ -1.98
VPS26B-205ENST00000530402 NUPR1O60356 82 aa2.65□□□□□ -1.99
VPS26B-205ENST00000530402 SCGB3A1Q96QR1 104 aa2.65□□□□□ -1.99
VPS26B-205ENST00000530402 SMCO4Q9NRQ5 59 aa2.65□□□□□ -1.99
VPS26B-205ENST00000530402 C6orf48Q9UBA6 75 aa2.65□□□□□ -1.99
VPS26B-205ENST00000530402 DNAH8Q96JB1 4490 aa2.65□□□□□ -1.99
VPS26B-205ENST00000530402 MYCBP2O75592 4640 aa2.65□□□□□ -1.99
VPS26B-205ENST00000530402 VPS13BQ7Z7G8 4022 aa2.65□□□□□ -1.99
VPS26B-205ENST00000530402 F8VRH5 84 aa2.64□□□□□ -1.99
VPS26B-205ENST00000530402 H3BRM9 83 aa2.64□□□□□ -1.99
VPS26B-205ENST00000530402 RPL28P46779 137 aaKnown RBP2.64□□□□□ -1.99
VPS26B-205ENST00000530402 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
VPS26B-205ENST00000530402 CTAG1AP78358 180 aa2.64□□□□□ -1.99
VPS26B-205ENST00000530402 S100A12P80511 92 aa2.64□□□□□ -1.99
VPS26B-205ENST00000530402 CLLU1Q5K131 121 aa2.64□□□□□ -1.99
VPS26B-205ENST00000530402 Q8IZM0 81 aa2.64□□□□□ -1.99
VPS26B-205ENST00000530402 TRAV9-1A0A075B6T8 112 aa2.63□□□□□ -1.99
VPS26B-205ENST00000530402 C2orf82Q6UX34 121 aa2.63□□□□□ -1.99
VPS26B-205ENST00000530402 AMELXQ99217 191 aa2.63□□□□□ -1.99
VPS26B-205ENST00000530402 C22orf24Q9Y442 160 aa2.63□□□□□ -1.99
VPS26B-205ENST00000530402 A0A1B0GU33 70 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 IGIPA6NJ69 53 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 CRYGAP11844 174 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 NDUFA6P56556 154 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 RAB5BP61020 215 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 SFTA2Q6UW10 78 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 COMMD7Q86VX2 200 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 TOMM6Q96B49 74 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 GNB1LQ9BYB4 327 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 XAGE1AQ9HD64 81 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 TP73-AS1Q9UF72 201 aa2.62□□□□□ -1.99
VPS26B-205ENST00000530402 TINCRA0A1B0GVN0 87 aa2.61□□□□□ -1.99
VPS26B-205ENST00000530402 A0A1W2PNM2 257 aa2.61□□□□□ -1.99
VPS26B-205ENST00000530402 BCE1O60756 84 aa2.61□□□□□ -1.99
VPS26B-205ENST00000530402 CD164Q04900 197 aa2.61□□□□□ -1.99
VPS26B-205ENST00000530402 FABP9Q0Z7S8 132 aa2.61□□□□□ -1.99
VPS26B-205ENST00000530402 FAM19A3Q7Z5A8 133 aa2.61□□□□□ -1.99
VPS26B-205ENST00000530402 COX7B2Q8TF08 81 aa2.61□□□□□ -1.99
VPS26B-205ENST00000530402 CDKN2A-AS1Q9UH64 79 aa2.61□□□□□ -1.99
VPS26B-205ENST00000530402 IGKV2D-26A0A0A0MRZ7 120 aa2.6□□□□□ -1.99
VPS26B-205ENST00000530402 TMEM218A2RU14 115 aa2.6□□□□□ -1.99
VPS26B-205ENST00000530402 LINC00587B1AMM8 73 aa2.6□□□□□ -1.99
VPS26B-205ENST00000530402 ZNF73O43830 326 aaPredicted RBP2.6□□□□□ -1.99
VPS26B-205ENST00000530402 LINC00614P0C842 121 aa2.6□□□□□ -1.99
VPS26B-205ENST00000530402 COX17Q14061 63 aa2.6□□□□□ -1.99
VPS26B-205ENST00000530402 RHEBQ15382 184 aa2.6□□□□□ -1.99
VPS26B-205ENST00000530402 SEC11CQ9BY50 192 aa2.6□□□□□ -1.99
VPS26B-205ENST00000530402 CST9LQ9H4G1 147 aa2.6□□□□□ -1.99
VPS26B-205ENST00000530402 S100A6P06703 90 aa2.59□□□□□ -1.99
VPS26B-205ENST00000530402 TMEM170BQ5T4T1 132 aa2.59□□□□□ -1.99
VPS26B-205ENST00000530402 LRP1Q07954 4544 aaKnown RBP2.59□□□□□ -1.99
VPS26B-205ENST00000530402 HBDP02042 147 aa2.58□□□□□ -2
VPS26B-205ENST00000530402 SPINK8P0C7L1 97 aa2.58□□□□□ -2
VPS26B-205ENST00000530402 ZNF22P17026 224 aaPredicted RBP2.58□□□□□ -2
VPS26B-205ENST00000530402 LINC00158P58513 81 aa2.58□□□□□ -2
VPS26B-205ENST00000530402 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
VPS26B-205ENST00000530402 BAGE3Q86Y29 109 aa2.58□□□□□ -2
VPS26B-205ENST00000530402 FAT3Q8TDW7 4589 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms