RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 LEPROTL1O95214 131 aa5.7□□□□□ -1.5
COPB1-207ENST00000529866 SOSTDC1Q6X4U4 206 aa5.7□□□□□ -1.5
COPB1-207ENST00000529866 LOC107984156A0A0G2JMH3 177 aa5.69□□□□□ -1.5
COPB1-207ENST00000529866 J3QQQ9 107 aa5.69□□□□□ -1.5
COPB1-207ENST00000529866 FABP4P15090 132 aa5.69□□□□□ -1.5
COPB1-207ENST00000529866 ARL17AQ8IVW1 177 aa5.69□□□□□ -1.5
COPB1-207ENST00000529866 PLNP26678 52 aa5.68□□□□□ -1.5
COPB1-207ENST00000529866 DDTP30046 118 aa5.68□□□□□ -1.5
COPB1-207ENST00000529866 S100A12P80511 92 aa5.68□□□□□ -1.5
COPB1-207ENST00000529866 COX6B2Q6YFQ2 88 aa5.68□□□□□ -1.5
COPB1-207ENST00000529866 DPM2O94777 84 aa5.67□□□□□ -1.5
COPB1-207ENST00000529866 NPC2P61916 151 aa5.67□□□□□ -1.5
COPB1-207ENST00000529866 SLC7A5P1Q8MH63 180 aa5.67□□□□□ -1.5
COPB1-207ENST00000529866 MAP1LC3CQ9BXW4 147 aa5.67□□□□□ -1.5
COPB1-207ENST00000529866 TRBV10-2A0A0K0K1G8 114 aa5.66□□□□□ -1.5
COPB1-207ENST00000529866 COLCA2A8K830 154 aa5.66□□□□□ -1.5
COPB1-207ENST00000529866 LINC00587B1AMM8 73 aa5.66□□□□□ -1.5
COPB1-207ENST00000529866 IGKCP01834 107 aa5.66□□□□□ -1.5
COPB1-207ENST00000529866 ADAMTSL4-AS1Q5T5F5 129 aa5.66□□□□□ -1.5
COPB1-207ENST00000529866 C9orf153Q5TBE3 101 aa5.66□□□□□ -1.5
COPB1-207ENST00000529866 Q6ZRX8 168 aa5.66□□□□□ -1.5
COPB1-207ENST00000529866 SPANXB1Q9NS25 103 aaPredicted RBP5.66□□□□□ -1.5
COPB1-207ENST00000529866 USH2AO75445 5202 aa5.65□□□□□ -1.5
COPB1-207ENST00000529866 A0A0J9YXY3 114 aa5.65□□□□□ -1.5
COPB1-207ENST00000529866 IGLV6-57P01721 117 aa5.65□□□□□ -1.5
COPB1-207ENST00000529866 LGALS3P17931 250 aaKnown RBP5.65□□□□□ -1.5
COPB1-207ENST00000529866 HSPB8Q9UJY1 196 aa5.65□□□□□ -1.5
COPB1-207ENST00000529866 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
COPB1-207ENST00000529866 NDUFC2O95298 119 aa5.64□□□□□ -1.51
COPB1-207ENST00000529866 NMUP48645 174 aa5.64□□□□□ -1.51
COPB1-207ENST00000529866 HERVK_113P61574 105 aa5.64□□□□□ -1.51
COPB1-207ENST00000529866 ST20-AS1Q8NBB2 130 aa5.64□□□□□ -1.51
COPB1-207ENST00000529866 LIMD2Q9BT23 127 aa5.64□□□□□ -1.51
COPB1-207ENST00000529866 TRAV23DV6A0A075B6W5 121 aa5.63□□□□□ -1.51
COPB1-207ENST00000529866 C9orf92A6NGG3 77 aa5.63□□□□□ -1.51
COPB1-207ENST00000529866 LITAFQ99732 161 aa5.63□□□□□ -1.51
COPB1-207ENST00000529866 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
COPB1-207ENST00000529866 E9PLD3 99 aa5.62□□□□□ -1.51
COPB1-207ENST00000529866 S100A7L2Q5SY68 101 aa5.62□□□□□ -1.51
COPB1-207ENST00000529866 MIEN1Q9BRT3 115 aa5.62□□□□□ -1.51
COPB1-207ENST00000529866 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
COPB1-207ENST00000529866 ZNF73O43830 326 aaPredicted RBP5.6□□□□□ -1.51
COPB1-207ENST00000529866 SYS1-DBNDD2H3BUS1 97 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST1H2BKO60814 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST1H2BJP06899 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST1H2BOP23527 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST1H2BBP33778 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST1H2BDP58876 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST1H2BCP62807 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST2H2BEQ16778 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST1H2BHQ93079 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST1H2BNQ99877 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 HIST1H2BMQ99879 126 aa5.59□□□□□ -1.51
COPB1-207ENST00000529866 JOSD1Q15040 202 aaPredicted RBP5.58□□□□□ -1.52
COPB1-207ENST00000529866 LINC01545Q5VT33 79 aa5.58□□□□□ -1.52
COPB1-207ENST00000529866 LINC00308Q8TCZ7 52 aa5.58□□□□□ -1.52
COPB1-207ENST00000529866 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
COPB1-207ENST00000529866 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
COPB1-207ENST00000529866 CFC1P0CG37 223 aa5.56□□□□□ -1.52
COPB1-207ENST00000529866 SPANXCQ9NY87 97 aa5.56□□□□□ -1.52
COPB1-207ENST00000529866 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
COPB1-207ENST00000529866 ZNF815PA8K554 130 aa5.55□□□□□ -1.52
COPB1-207ENST00000529866 TIMM17BO60830 172 aa5.55□□□□□ -1.52
COPB1-207ENST00000529866 SPRR1BP22528 89 aa5.55□□□□□ -1.52
COPB1-207ENST00000529866 RPL37P61927 97 aaKnown RBP5.55□□□□□ -1.52
COPB1-207ENST00000529866 SLC25A34Q6PIV7 304 aa5.55□□□□□ -1.52
COPB1-207ENST00000529866 HRCT1Q6UXD1 115 aa5.55□□□□□ -1.52
COPB1-207ENST00000529866 OR13C6PQ8NH95 151 aa5.55□□□□□ -1.52
COPB1-207ENST00000529866 C5orf52A6NGY3 159 aa5.54□□□□□ -1.52
COPB1-207ENST00000529866 C3orf79P0CE67 100 aa5.54□□□□□ -1.52
COPB1-207ENST00000529866 ELOF1P60002 83 aaKnown RBP5.53□□□□□ -1.52
COPB1-207ENST00000529866 C6orf99Q4VX62 202 aa5.53□□□□□ -1.52
COPB1-207ENST00000529866 PET117Q6UWS5 81 aa5.53□□□□□ -1.52
COPB1-207ENST00000529866 ANKRD39Q53RE8 183 aa5.52□□□□□ -1.53
COPB1-207ENST00000529866 SPANXDQ9BXN6 97 aa5.52□□□□□ -1.53
COPB1-207ENST00000529866 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
COPB1-207ENST00000529866 A0A0G2JQZ4 141 aa5.51□□□□□ -1.53
COPB1-207ENST00000529866 COX7BP24311 80 aa5.51□□□□□ -1.53
COPB1-207ENST00000529866 Q1RN00 199 aa5.51□□□□□ -1.53
COPB1-207ENST00000529866 HINT1P49773 126 aaPredicted RBP5.5□□□□□ -1.53
COPB1-207ENST00000529866 KRTDAPP60985 99 aa5.5□□□□□ -1.53
COPB1-207ENST00000529866 Q6Q795 121 aa5.5□□□□□ -1.53
COPB1-207ENST00000529866 DHRS4-AS1Q9P1J3 65 aa5.5□□□□□ -1.53
COPB1-207ENST00000529866 LAMTOR3Q9UHA4 124 aa5.5□□□□□ -1.53
COPB1-207ENST00000529866 CD164Q04900 197 aa5.49□□□□□ -1.53
COPB1-207ENST00000529866 COA6Q5JTJ3 125 aaKnown RBP5.49□□□□□ -1.53
COPB1-207ENST00000529866 SMIM29Q86T20 159 aa5.49□□□□□ -1.53
COPB1-207ENST00000529866 ATOH7Q8N100 152 aa5.49□□□□□ -1.53
COPB1-207ENST00000529866 DEFB105AQ8NG35 78 aa5.49□□□□□ -1.53
COPB1-207ENST00000529866 CBY1Q9Y3M2 126 aa5.48□□□□□ -1.53
COPB1-207ENST00000529866 TMEM238LA0A1B0GVL6 79 aa5.47□□□□□ -1.53
COPB1-207ENST00000529866 H7C2G1 150 aa5.47□□□□□ -1.53
COPB1-207ENST00000529866 GHRHP01286 108 aa5.47□□□□□ -1.53
COPB1-207ENST00000529866 Q5XG85 94 aa5.47□□□□□ -1.53
COPB1-207ENST00000529866 PCP2Q8IVA1 136 aa5.47□□□□□ -1.53
COPB1-207ENST00000529866 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
COPB1-207ENST00000529866 IGLV5-48A0A075B6I7 105 aa5.46□□□□□ -1.54
COPB1-207ENST00000529866 TAL2Q16559 108 aa5.46□□□□□ -1.54
COPB1-207ENST00000529866 SCGB1D4Q6XE38 83 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms