RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 CRYGAP11844 174 aa7.22□□□□□ -1.25
USH1C-208ENST00000529563 HINT1P49773 126 aaPredicted RBP7.22□□□□□ -1.25
USH1C-208ENST00000529563 ARL17AQ8IVW1 177 aa7.22□□□□□ -1.25
USH1C-208ENST00000529563 LINC00518Q8N0U6 118 aa7.22□□□□□ -1.25
USH1C-208ENST00000529563 PRYO14603 147 aa7.21□□□□□ -1.26
USH1C-208ENST00000529563 COX8AP10176 69 aa7.21□□□□□ -1.26
USH1C-208ENST00000529563 HIST1H4GQ99525 98 aa7.21□□□□□ -1.26
USH1C-208ENST00000529563 TMEM126AQ9H061 195 aa7.21□□□□□ -1.26
USH1C-208ENST00000529563 TRBV10-3A0A0K0K1G6 114 aa7.2□□□□□ -1.26
USH1C-208ENST00000529563 SLC25A34Q6PIV7 304 aa7.2□□□□□ -1.26
USH1C-208ENST00000529563 Q8NDZ9 215 aa7.2□□□□□ -1.26
USH1C-208ENST00000529563 C14orf144Q96I85 54 aa7.2□□□□□ -1.26
USH1C-208ENST00000529563 LITAFQ99732 161 aa7.2□□□□□ -1.26
USH1C-208ENST00000529563 A6NDN8 102 aa7.19□□□□□ -1.26
USH1C-208ENST00000529563 SOSTDC1Q6X4U4 206 aa7.19□□□□□ -1.26
USH1C-208ENST00000529563 MUSTN1Q8IVN3 82 aa7.19□□□□□ -1.26
USH1C-208ENST00000529563 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
USH1C-208ENST00000529563 TRAV23DV6A0A075B6W5 121 aa7.17□□□□□ -1.26
USH1C-208ENST00000529563 A0A087X002 238 aa7.17□□□□□ -1.26
USH1C-208ENST00000529563 DLEU1O43261 78 aa7.17□□□□□ -1.26
USH1C-208ENST00000529563 PYY3Q5JQD4 70 aa7.17□□□□□ -1.26
USH1C-208ENST00000529563 HIGD2AQ9BW72 106 aa7.17□□□□□ -1.26
USH1C-208ENST00000529563 PRLHP81277 87 aa7.16□□□□□ -1.26
USH1C-208ENST00000529563 KCNQ1DNQ9H478 68 aa7.16□□□□□ -1.26
USH1C-208ENST00000529563 ANAPC11Q9NYG5 84 aa7.16□□□□□ -1.26
USH1C-208ENST00000529563 TRAV13-2A0A0B4J235 113 aa7.15□□□□□ -1.26
USH1C-208ENST00000529563 LCE2DQ5TA82 110 aaPredicted RBP7.15□□□□□ -1.26
USH1C-208ENST00000529563 EIF4EBP3O60516 100 aaPredicted RBP7.14□□□□□ -1.27
USH1C-208ENST00000529563 IGLV6-57P01721 117 aa7.14□□□□□ -1.27
USH1C-208ENST00000529563 LINC00337Q8N6G1 96 aa7.14□□□□□ -1.27
USH1C-208ENST00000529563 PPDPFQ9H3Y8 114 aa7.14□□□□□ -1.27
USH1C-208ENST00000529563 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
USH1C-208ENST00000529563 LINC00304Q8N9R0 145 aa7.13□□□□□ -1.27
USH1C-208ENST00000529563 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
USH1C-208ENST00000529563 ZNF706Q9Y5V0 76 aaPredicted RBP7.13□□□□□ -1.27
USH1C-208ENST00000529563 CDIP1Q9H305 208 aa7.12□□□□□ -1.27
USH1C-208ENST00000529563 HIGD1BQ9P298 99 aa7.12□□□□□ -1.27
USH1C-208ENST00000529563 MUC2Q02817 5179 aa7.11□□□□□ -1.27
USH1C-208ENST00000529563 TMEM238LA0A1B0GVL6 79 aa7.11□□□□□ -1.27
USH1C-208ENST00000529563 A4D1N5 150 aa7.11□□□□□ -1.27
USH1C-208ENST00000529563 A6NJY4 79 aa7.11□□□□□ -1.27
USH1C-208ENST00000529563 FAM229BQ4G0N7 80 aa7.11□□□□□ -1.27
USH1C-208ENST00000529563 RAB37Q96AX2 223 aa7.11□□□□□ -1.27
USH1C-208ENST00000529563 VAMP3Q15836 100 aa7.1□□□□□ -1.27
USH1C-208ENST00000529563 UQCR10Q9UDW1 63 aa7.1□□□□□ -1.27
USH1C-208ENST00000529563 SPRR1AP35321 89 aa7.09□□□□□ -1.27
USH1C-208ENST00000529563 TAL2Q16559 108 aa7.09□□□□□ -1.27
USH1C-208ENST00000529563 KRTAP13-2Q52LG2 175 aa7.09□□□□□ -1.27
USH1C-208ENST00000529563 C12orf57Q99622 126 aa7.09□□□□□ -1.27
USH1C-208ENST00000529563 B5MCH6 92 aa7.08□□□□□ -1.28
USH1C-208ENST00000529563 SMIM6P0DI80 62 aa7.08□□□□□ -1.28
USH1C-208ENST00000529563 COX7BP24311 80 aa7.08□□□□□ -1.28
USH1C-208ENST00000529563 C6orf99Q4VX62 202 aa7.08□□□□□ -1.28
USH1C-208ENST00000529563 Q6ZRX8 168 aa7.08□□□□□ -1.28
USH1C-208ENST00000529563 SMCR5Q8TEV8 140 aa7.08□□□□□ -1.28
USH1C-208ENST00000529563 IGLV7-46A0A075B6I9 117 aa7.07□□□□□ -1.28
USH1C-208ENST00000529563 Q1RN00 199 aa7.07□□□□□ -1.28
USH1C-208ENST00000529563 KRTAP13-1Q8IUC0 172 aa7.07□□□□□ -1.28
USH1C-208ENST00000529563 H7C2G1 150 aa7.06□□□□□ -1.28
USH1C-208ENST00000529563 SLC25A20O43772 301 aa7.06□□□□□ -1.28
USH1C-208ENST00000529563 CEND1Q8N111 149 aa7.06□□□□□ -1.28
USH1C-208ENST00000529563 DHRS4-AS1Q9P1J3 65 aa7.06□□□□□ -1.28
USH1C-208ENST00000529563 A0A1B0GWB2 263 aa7.05□□□□□ -1.28
USH1C-208ENST00000529563 SNCGO76070 127 aa7.05□□□□□ -1.28
USH1C-208ENST00000529563 HSD52Q0P140 79 aa7.05□□□□□ -1.28
USH1C-208ENST00000529563 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
USH1C-208ENST00000529563 C2orf91Q6ZV80 131 aa7.05□□□□□ -1.28
USH1C-208ENST00000529563 NHP2Q9NX24 153 aaKnown RBP7.05□□□□□ -1.28
USH1C-208ENST00000529563 TRBV7-6A0A0J9YX20 115 aa7.04□□□□□ -1.28
USH1C-208ENST00000529563 KRTAP4-16G5E9R7 235 aaPredicted RBP7.04□□□□□ -1.28
USH1C-208ENST00000529563 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
USH1C-208ENST00000529563 GAGE2AQ6NT46 116 aa7.04□□□□□ -1.28
USH1C-208ENST00000529563 SMIM11BQ8TCY0 68 aa7.04□□□□□ -1.28
USH1C-208ENST00000529563 PRO1933Q9H354 126 aa7.04□□□□□ -1.28
USH1C-208ENST00000529563 TSTD3H0UI37 97 aa7.02□□□□□ -1.29
USH1C-208ENST00000529563 ELOF1P60002 83 aaKnown RBP7.02□□□□□ -1.29
USH1C-208ENST00000529563 BVES-AS1Q5T3Y7 98 aa7.02□□□□□ -1.29
USH1C-208ENST00000529563 SPRR4Q96PI1 79 aa7.02□□□□□ -1.29
USH1C-208ENST00000529563 A0A0B4J2C4 111 aa7.01□□□□□ -1.29
USH1C-208ENST00000529563 CTAG1AP78358 180 aa7.01□□□□□ -1.29
USH1C-208ENST00000529563 C3orf22Q8N5N4 141 aa7.01□□□□□ -1.29
USH1C-208ENST00000529563 Q9BRP9 147 aa7.01□□□□□ -1.29
USH1C-208ENST00000529563 CFC1BP0CG36 223 aa7□□□□□ -1.29
USH1C-208ENST00000529563 CFC1P0CG37 223 aa7□□□□□ -1.29
USH1C-208ENST00000529563 SPAG11AQ6PDA7 123 aa7□□□□□ -1.29
USH1C-208ENST00000529563 PRO1854Q9UHT4 67 aa7□□□□□ -1.29
USH1C-208ENST00000529563 DEFB105AQ8NG35 78 aa6.99□□□□□ -1.29
USH1C-208ENST00000529563 LOC105371267A0A1B0GV96 52 aa6.98□□□□□ -1.29
USH1C-208ENST00000529563 M0R143 59 aa6.98□□□□□ -1.29
USH1C-208ENST00000529563 ERC2-IT1O76042 136 aa6.98□□□□□ -1.29
USH1C-208ENST00000529563 PSMB2P49721 201 aa6.98□□□□□ -1.29
USH1C-208ENST00000529563 FXYD2P54710 66 aa6.98□□□□□ -1.29
USH1C-208ENST00000529563 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
USH1C-208ENST00000529563 C9orf153Q5TBE3 101 aa6.97□□□□□ -1.29
USH1C-208ENST00000529563 LAMTOR3Q9UHA4 124 aa6.97□□□□□ -1.29
USH1C-208ENST00000529563 hADV29S1A0JD25 119 aa6.96□□□□□ -1.3
USH1C-208ENST00000529563 COX6CP09669 75 aa6.96□□□□□ -1.3
USH1C-208ENST00000529563 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.3
USH1C-208ENST00000529563 FAT4Q6V0I7 4981 aa6.95□□□□□ -1.3
USH1C-208ENST00000529563 H0YGX0 51 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms