RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 SCGB3A1Q96QR1 104 aa5.05□□□□□ -1.6
VPS11-203ENST00000529545 C20orf202A1L168 122 aa5.04□□□□□ -1.6
VPS11-203ENST00000529545 H3BRM9 83 aa5.04□□□□□ -1.6
VPS11-203ENST00000529545 SPINK8P0C7L1 97 aa5.04□□□□□ -1.6
VPS11-203ENST00000529545 VPREB1P12018 145 aa5.04□□□□□ -1.6
VPS11-203ENST00000529545 COL5A1-AS1Q5SY13 56 aa5.04□□□□□ -1.6
VPS11-203ENST00000529545 ERASQ7Z444 233 aa5.04□□□□□ -1.6
VPS11-203ENST00000529545 TOMM6Q96B49 74 aa5.04□□□□□ -1.6
VPS11-203ENST00000529545 CBY1Q9Y3M2 126 aa5.04□□□□□ -1.6
VPS11-203ENST00000529545 IGLV5-45A0A087WSX0 123 aa5.03□□□□□ -1.6
VPS11-203ENST00000529545 SND1-IT1Q9HBX3 110 aa5.03□□□□□ -1.6
VPS11-203ENST00000529545 UQCR10Q9UDW1 63 aa5.03□□□□□ -1.6
VPS11-203ENST00000529545 LINC01549A6NIU2 74 aa5.02□□□□□ -1.61
VPS11-203ENST00000529545 C3orf79P0CE67 100 aa5.02□□□□□ -1.61
VPS11-203ENST00000529545 COX17Q14061 63 aa5.02□□□□□ -1.61
VPS11-203ENST00000529545 VAMP8Q9BV40 100 aa5.02□□□□□ -1.61
VPS11-203ENST00000529545 PMCHL1Q16048 86 aa5.01□□□□□ -1.61
VPS11-203ENST00000529545 BAGE3Q86Y29 109 aa5.01□□□□□ -1.61
VPS11-203ENST00000529545 C18orf32Q8TCD1 76 aa5.01□□□□□ -1.61
VPS11-203ENST00000529545 URB1-AS1Q96HZ7 61 aa5.01□□□□□ -1.61
VPS11-203ENST00000529545 CST9LQ9H4G1 147 aa5.01□□□□□ -1.61
VPS11-203ENST00000529545 ERG28Q9UKR5 140 aa5.01□□□□□ -1.61
VPS11-203ENST00000529545 SLC25A20O43772 301 aa5□□□□□ -1.61
VPS11-203ENST00000529545 UBE2V1Q13404 147 aa5□□□□□ -1.61
VPS11-203ENST00000529545 PMVKQ15126 192 aa5□□□□□ -1.61
VPS11-203ENST00000529545 SPATA45Q537H7 98 aa5□□□□□ -1.61
VPS11-203ENST00000529545 PAM16Q9Y3D7 125 aa5□□□□□ -1.61
VPS11-203ENST00000529545 RPS29P62273 56 aaKnown RBP4.99□□□□□ -1.61
VPS11-203ENST00000529545 MT1HP80294 61 aa4.98□□□□□ -1.61
VPS11-203ENST00000529545 SFTA2Q6UW10 78 aa4.98□□□□□ -1.61
VPS11-203ENST00000529545 Q8N377 158 aa4.98□□□□□ -1.61
VPS11-203ENST00000529545 SMCR5Q8TEV8 140 aa4.98□□□□□ -1.61
VPS11-203ENST00000529545 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
VPS11-203ENST00000529545 IGLV9-49A0A0B4J1Y8 123 aa4.97□□□□□ -1.61
VPS11-203ENST00000529545 IGLV5-39A0A0G2JS06 123 aa4.97□□□□□ -1.61
VPS11-203ENST00000529545 ETDCA0A1B0GVM5 59 aa4.97□□□□□ -1.61
VPS11-203ENST00000529545 PRYO14603 147 aa4.97□□□□□ -1.61
VPS11-203ENST00000529545 LINC00158P58513 81 aa4.97□□□□□ -1.61
VPS11-203ENST00000529545 KRTDAPP60985 99 aa4.97□□□□□ -1.61
VPS11-203ENST00000529545 KIAA1644Q3SXP7 199 aa4.97□□□□□ -1.61
VPS11-203ENST00000529545 GAGE2AQ6NT46 116 aa4.97□□□□□ -1.61
VPS11-203ENST00000529545 SSBP3-AS1Q7Z2R9 100 aa4.97□□□□□ -1.61
VPS11-203ENST00000529545 MOBPQ13875 183 aa4.96□□□□□ -1.62
VPS11-203ENST00000529545 LINC00483Q53H64 154 aa4.96□□□□□ -1.62
VPS11-203ENST00000529545 Q8NDZ9 215 aa4.96□□□□□ -1.62
VPS11-203ENST00000529545 CHCHD1Q96BP2 118 aaKnown RBP4.96□□□□□ -1.62
VPS11-203ENST00000529545 IGLV8-61A0A075B6I0 122 aa4.95□□□□□ -1.62
VPS11-203ENST00000529545 M0R2T5 61 aa4.95□□□□□ -1.62
VPS11-203ENST00000529545 TAX1BP3O14907 124 aa4.95□□□□□ -1.62
VPS11-203ENST00000529545 ZNF22P17026 224 aaPredicted RBP4.94□□□□□ -1.62
VPS11-203ENST00000529545 PCP4P48539 62 aa4.94□□□□□ -1.62
VPS11-203ENST00000529545 PCOTHQ58A44 107 aa4.94□□□□□ -1.62
VPS11-203ENST00000529545 PET117Q6UWS5 81 aa4.94□□□□□ -1.62
VPS11-203ENST00000529545 SYS1-DBNDD2H3BUS1 97 aa4.93□□□□□ -1.62
VPS11-203ENST00000529545 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
VPS11-203ENST00000529545 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
VPS11-203ENST00000529545 BVES-AS1Q5T3Y7 98 aa4.93□□□□□ -1.62
VPS11-203ENST00000529545 FA2HQ7L5A8 372 aa4.93□□□□□ -1.62
VPS11-203ENST00000529545 KCNQ1DNQ9H478 68 aa4.93□□□□□ -1.62
VPS11-203ENST00000529545 A0A0U1RRA0 63 aa4.92□□□□□ -1.62
VPS11-203ENST00000529545 LINC01546A6NGU7 62 aa4.92□□□□□ -1.62
VPS11-203ENST00000529545 SPRR1AP35321 89 aa4.92□□□□□ -1.62
VPS11-203ENST00000529545 HINT1P49773 126 aaPredicted RBP4.92□□□□□ -1.62
VPS11-203ENST00000529545 LINC01545Q5VT33 79 aa4.92□□□□□ -1.62
VPS11-203ENST00000529545 BOD1L2Q8IYS8 172 aa4.92□□□□□ -1.62
VPS11-203ENST00000529545 NCR3O14931 201 aa4.91□□□□□ -1.62
VPS11-203ENST00000529545 HSBP1O75506 76 aa4.91□□□□□ -1.62
VPS11-203ENST00000529545 BATFQ16520 125 aa4.91□□□□□ -1.62
VPS11-203ENST00000529545 TMEM170BQ5T4T1 132 aa4.91□□□□□ -1.62
VPS11-203ENST00000529545 C9orf153Q5TBE3 101 aa4.91□□□□□ -1.62
VPS11-203ENST00000529545 Q6ZVH6 145 aa4.91□□□□□ -1.62
VPS11-203ENST00000529545 PMCHL2Q9BQD1 86 aa4.91□□□□□ -1.62
VPS11-203ENST00000529545 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
VPS11-203ENST00000529545 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.63
VPS11-203ENST00000529545 COX8AP10176 69 aa4.9□□□□□ -1.63
VPS11-203ENST00000529545 SLC25A34Q6PIV7 304 aa4.9□□□□□ -1.63
VPS11-203ENST00000529545 C2orf91Q6ZV80 131 aa4.9□□□□□ -1.63
VPS11-203ENST00000529545 TRBV10-3A0A0K0K1G6 114 aa4.89□□□□□ -1.63
VPS11-203ENST00000529545 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
VPS11-203ENST00000529545 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
VPS11-203ENST00000529545 ATOH7Q8N100 152 aa4.89□□□□□ -1.63
VPS11-203ENST00000529545 LIMD2Q9BT23 127 aa4.89□□□□□ -1.63
VPS11-203ENST00000529545 A0A096LNJ9 63 aa4.88□□□□□ -1.63
VPS11-203ENST00000529545 C9orf92A6NGG3 77 aa4.88□□□□□ -1.63
VPS11-203ENST00000529545 C11orf86A6NJI1 115 aa4.88□□□□□ -1.63
VPS11-203ENST00000529545 ERC2-IT1O76042 136 aa4.88□□□□□ -1.63
VPS11-203ENST00000529545 LEPROTL1O95214 131 aa4.88□□□□□ -1.63
VPS11-203ENST00000529545 SMIM13P0DJ93 91 aa4.88□□□□□ -1.63
VPS11-203ENST00000529545 OCIAD2Q56VL3 154 aa4.88□□□□□ -1.63
VPS11-203ENST00000529545 HSPB8Q9UJY1 196 aa4.88□□□□□ -1.63
VPS11-203ENST00000529545 MIR7-3HGQ8N6C7 128 aa4.87□□□□□ -1.63
VPS11-203ENST00000529545 MAP1LC3CQ9BXW4 147 aa4.87□□□□□ -1.63
VPS11-203ENST00000529545 Q6ZRX8 168 aa4.86□□□□□ -1.63
VPS11-203ENST00000529545 HBDP02042 147 aa4.85□□□□□ -1.63
VPS11-203ENST00000529545 HERV-K104P63124 156 aa4.85□□□□□ -1.63
VPS11-203ENST00000529545 VAMP3Q15836 100 aa4.85□□□□□ -1.63
VPS11-203ENST00000529545 Q9BRP9 147 aa4.85□□□□□ -1.63
VPS11-203ENST00000529545 IGLV6-57P01721 117 aa4.84□□□□□ -1.63
VPS11-203ENST00000529545 HIGD1BQ9P298 99 aa4.84□□□□□ -1.63
VPS11-203ENST00000529545 CHTOPQ9Y3Y2 248 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms